| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is menC
Identifier: 15602959
GI number: 15602959
Start: 1289265
End: 1290278
Strand: Reverse
Name: menC
Synonym: PM1094
Alternate gene names: 15602959
Gene position: 1290278-1289265 (Counterclockwise)
Preceding gene: 15602960
Following gene: 15602958
Centisome position: 57.16
GC content: 43.69
Gene sequence:
>1014_bases ATGACCATGATAAGAAAATTTAAGTTATATCAATACAGTATTCCCGTCGATAGCCAACTCATTTTACGCAATCGTTTCTT AAAAAAGCGTGAAGGGTTGCTAGTGCAAGTTTGCTGTGATGATGCACAAGGTTGGGGGGAAATTGCCCCCCTACCTGAGT TTAGCCAAGAAACTTTAGAGCAGGCGCGTGAACAAGCATTAGCATGGTTAGAAGAATGGTCTGCCAGTGATGGTTCAGCC GGAAAATTGCCTTTAGAGCATTTATTTCCTTCCGTGGCATTTGGTTTAAGCTGTGCGTTAGCGGAAATGAAGGGGTTACT ACATGAAGAAGGCAATTATCAAGTGGCACCACTTTGTTATGGTGATCCTGATGAATTATATGATCCCCTCAACCAAATGC AAGGTGAAAAAGTCGCCAAAATTAAAGTGGGGATGTATGAAGCTAATCGCGATGGGCTAATTGCGGATATGCTCCTTGAA GCCATTCCTGATTTACATTTACGCCTTGATGCGAACCGCAGTTGGACGCCGAGCAAAGCACAGATGTTTGCGAAATATGT CAAACCAGAACATCGTGCACGCATTCAATTTTTAGAAGAACCGTGTAAAACGCCAGCAGAAAGCCTGCAATTTGCGGAAG AAACCGGTATTGCGATAGCCTGGGATGAAACAGTACGTGACGCAGAATTTCAACAAAATCCACCGCACTTTTTTACGCCT CAAGTGAAAGCCATTGTGATCAAGCCAACGTTAGTGGGTTCTATACAACGCTGTGTTGAATTGATTAAGCAAGCACATGC GCATGGAATACAAGCGGTAATCAGTTCTTCCATTGAAAGTAGCCTAGGGTTAACGCAATTAGCACGTCTTGCGCAACAAT ATACCCCAAATACGGTGCCGGGACTGGATACGCTAGATTTGATGGATTACCAAGTGATACGTCCGTGGCCAAGCTCAACG TTACCACTGATTGACTTAGATTCAGAATATATTGTTCCCATTAAGCTGGACTGA
Upstream 100 bases:
>100_bases CGGTATTTTTTGTCGGTATGGCGCTGTTAACGCTTGATCCGAAAGACCGTTGTTTAGATTATGGTGGACGTTATGACGAT GCAACAAAAATATGTGAAAA
Downstream 100 bases:
>100_bases TAAGACCACAAAAAGGCTGTTATTTCAGAAAAAATAGTTATAATTCTCAACTTTTAATGAGGAAGGCATTATGTCGCAAC TAAAACGAATTTTGCTGTTA
Product: O-succinylbenzoate synthase
Products: NA
Alternate protein names: OSB synthase; OSBS; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase; o-succinylbenzoic acid synthase
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MTMIRKFKLYQYSIPVDSQLILRNRFLKKREGLLVQVCCDDAQGWGEIAPLPEFSQETLEQAREQALAWLEEWSASDGSA GKLPLEHLFPSVAFGLSCALAEMKGLLHEEGNYQVAPLCYGDPDELYDPLNQMQGEKVAKIKVGMYEANRDGLIADMLLE AIPDLHLRLDANRSWTPSKAQMFAKYVKPEHRARIQFLEEPCKTPAESLQFAEETGIAIAWDETVRDAEFQQNPPHFFTP QVKAIVIKPTLVGSIQRCVELIKQAHAHGIQAVISSSIESSLGLTQLARLAQQYTPNTVPGLDTLDLMDYQVIRPWPSST LPLIDLDSEYIVPIKLD
Sequences:
>Translated_337_residues MTMIRKFKLYQYSIPVDSQLILRNRFLKKREGLLVQVCCDDAQGWGEIAPLPEFSQETLEQAREQALAWLEEWSASDGSA GKLPLEHLFPSVAFGLSCALAEMKGLLHEEGNYQVAPLCYGDPDELYDPLNQMQGEKVAKIKVGMYEANRDGLIADMLLE AIPDLHLRLDANRSWTPSKAQMFAKYVKPEHRARIQFLEEPCKTPAESLQFAEETGIAIAWDETVRDAEFQQNPPHFFTP QVKAIVIKPTLVGSIQRCVELIKQAHAHGIQAVISSSIESSLGLTQLARLAQQYTPNTVPGLDTLDLMDYQVIRPWPSST LPLIDLDSEYIVPIKLD >Mature_336_residues TMIRKFKLYQYSIPVDSQLILRNRFLKKREGLLVQVCCDDAQGWGEIAPLPEFSQETLEQAREQALAWLEEWSASDGSAG KLPLEHLFPSVAFGLSCALAEMKGLLHEEGNYQVAPLCYGDPDELYDPLNQMQGEKVAKIKVGMYEANRDGLIADMLLEA IPDLHLRLDANRSWTPSKAQMFAKYVKPEHRARIQFLEEPCKTPAESLQFAEETGIAIAWDETVRDAEFQQNPPHFFTPQ VKAIVIKPTLVGSIQRCVELIKQAHAHGIQAVISSSIESSLGLTQLARLAQQYTPNTVPGLDTLDLMDYQVIRPWPSSTL PLIDLDSEYIVPIKLD
Specific function: Converts SHCHC to OSB
COG id: COG1441
COG function: function code H; O-succinylbenzoate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family. MenC type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1788596, Length=326, Percent_Identity=57.361963190184, Blast_Score=371, Evalue=1e-104,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MENC_PASMU (Q9CLV7)
Other databases:
- EMBL: AE004439 - RefSeq: NP_246031.1 - ProteinModelPortal: Q9CLV7 - SMR: Q9CLV7 - GeneID: 1244441 - GenomeReviews: AE004439_GR - KEGG: pmu:PM1094 - NMPDR: fig|272843.1.peg.1094 - HOGENOM: HBG644552 - OMA: YEANRDG - ProtClustDB: PRK05105 - BioCyc: PMUL272843:PM1094-MONOMER - BRENDA: 4.2.1.113 - HAMAP: MF_00470 - InterPro: IPR013342 - InterPro: IPR001354 - InterPro: IPR010196 - PANTHER: PTHR13794 - SMART: SM00922 - TIGRFAMs: TIGR01927
Pfam domain/function: PF01188 MR_MLE
EC number: =4.2.1.113
Molecular weight: Translated: 37892; Mature: 37761
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: ACT_SITE 142-142 ACT_SITE 248-248
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMIRKFKLYQYSIPVDSQLILRNRFLKKREGLLVQVCCDDAQGWGEIAPLPEFSQETLE CCCHHEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHH QAREQALAWLEEWSASDGSAGKLPLEHLFPSVAFGLSCALAEMKGLLHEEGNYQVAPLCY HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE GDPDELYDPLNQMQGEKVAKIKVGMYEANRDGLIADMLLEAIPDLHLRLDANRSWTPSKA CCHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHH QMFAKYVKPEHRARIQFLEEPCKTPAESLQFAEETGIAIAWDETVRDAEFQQNPPHFFTP HHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEECCHHCCCHHCCCCCCEECC QVKAIVIKPTLVGSIQRCVELIKQAHAHGIQAVISSSIESSLGLTQLARLAQQYTPNTVP CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC GLDTLDLMDYQVIRPWPSSTLPLIDLDSEYIVPIKLD CCCCHHHCCCCEECCCCCCCCCEEECCCCEEEEEEEC >Mature Secondary Structure TMIRKFKLYQYSIPVDSQLILRNRFLKKREGLLVQVCCDDAQGWGEIAPLPEFSQETLE CCHHEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHH QAREQALAWLEEWSASDGSAGKLPLEHLFPSVAFGLSCALAEMKGLLHEEGNYQVAPLCY HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE GDPDELYDPLNQMQGEKVAKIKVGMYEANRDGLIADMLLEAIPDLHLRLDANRSWTPSKA CCHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHH QMFAKYVKPEHRARIQFLEEPCKTPAESLQFAEETGIAIAWDETVRDAEFQQNPPHFFTP HHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEECCHHCCCHHCCCCCCEECC QVKAIVIKPTLVGSIQRCVELIKQAHAHGIQAVISSSIESSLGLTQLARLAQQYTPNTVP CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC GLDTLDLMDYQVIRPWPSSTLPLIDLDSEYIVPIKLD CCCCHHHCCCCEECCCCCCCCCEEECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100