| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is yhxB [C]
Identifier: 15602939
GI number: 15602939
Start: 1265437
End: 1267092
Strand: Direct
Name: yhxB [C]
Synonym: PM1074
Alternate gene names: 15602939
Gene position: 1265437-1267092 (Clockwise)
Preceding gene: 15602938
Following gene: 15602942
Centisome position: 56.06
GC content: 43.54
Gene sequence:
>1656_bases ATGTCAATCTTTACCCTTGCTCAACATTGGTTAGCACAAGATCCTGATCCTGAAACACATGCAGAACTTACCGCACTTCT TGACGCGGCAAAAACGGGGGATGCGAAAGCAAGCACAGAATTAAATGCACGCTTTGATGGTCGTTTACAGTTTGGTACTG CAGGCTTGCGTGGTCGTTTACAAGCCGGACCAATGGGGATGAACCGCGTGTTAGTTGCACAAGCAGCGGGGGGCTTAGCC GATTATTTAAAAGACTATGATAAAACCCCTTCCATTGTCATTGGCTATGACGGGCGTAAAAATTCAGATGTATTTGCACG CGATACTGCCGAAATTATGGCAGGCGCAGGCATCAAAGCCTACTTATTACCACGTAAATTGCCAACCCCAGTCCTTGCTT ATGCGATCAAATATTTTGATACCACAGCGGGGGTCATGGTGACCGCAAGTCATAACCCACCAGAAGATAATGGCTATAAA GTCTATTTAGGTAAAGCCAATGGTGGCGGTCAAATTGTTTCTCCAGCAGACCAAGACATCGCTAAACTGATTGATAAAGT GGCGGCTGGCTCCATTAAAGATTTACCACGTAGCCAAGATTTTATCGTACTGGATGACGAAGTCGTTGATGCCTACATTG CGAAAACAGCTAGCCTTGCCAAAGAACCCCAAACAGACATTAATTATGTCTATACCGCAATGCACGGTGTCGGCTATGAA GTATTGAGCAAAACGTTAGCTAAAGCAGGTTTACCACAACCACATTTAGTGGCGGAGCAAGTGTGGCCAGATGGCACGTT CCCAACAGTAAACTTCCCGAATCCAGAAGAAAAAGGCGCATTAGACTTAGCCATTAAAGTGGCGAAAGAGAAAAATGCCG AATTTATCATTGCGAATGACCCAGATGCTGACCGCTTAGCCGTCGCGGTACCAGATGCAGAAGGCAACTGGAAACCGTTG CATGGTAATGTGGTCGGTTGTTTCTTAGGTTGGTACTTAGCGAAACAATATCATGCACAAGGACAAAAAGGCATTCTTGC TTGTTCATTAGTTTCTTCGCCAGCACTGGCTGAGATTGCGAAAAAATACGGTTTCCAATCAGAAGAAACACTCACTGGCT TTAAATATATTGGTAAAGTCGATGGGTTATTATTCGGCTTTGAGGAAGCATTAGGTTATTTAGTTGACCCAGACAAAGTC CGTGATAAAGACGGTATTTCTGCCGCTATTTCGTTTTTAGATTTAGTACGTTACTTGAAAAAACAAGGCAAAACACTCGC CGACTATGCCGATGAATTCACTCAAGAATTTGGTGCTTATGTAAGTGGACAAATCTCGATTCGTGTTGATGACTTATCTG AAATTGGCAAATTAATGAGTGCACTGCGTCAAAATCCACCAAGCGATATCGGCGGTTTCAAAGTCGCACAATTCTTGGAT CACACCAAAACCGATCGCCAAAGTGATATTTTAGTTTTCGTTCTTGAAAATGGTAGTCGTTTGATCGTACGCCCATCTGG TACAGAACCAAAAATCAAGTTCTACCTCGATGCGAAAGGGAAAGATCCAAAAGATGCTGAGCAAGTGTTAGCCCAATTTG ATGAAAGTGTTCGTCACATTTTACGTCAAGATGAATTTGGTAAGCAGGATTGCTAA
Upstream 100 bases:
>100_bases GTTCAAATAATTTGAGTTTGATCATTTTCATTCTGCTTTTTTTCGGCTAGTCTAACTATGTTATATACCGCATAATTTTT AATAAAATTAAGGAGAATTT
Downstream 100 bases:
>100_bases TCTGACTTAAGCTACAACATGGCACAGTACACTGTGCCATTTTTCTTTACGCAGCTTAAGATAAACAGCGATTCAACGTC CCTTCACATTTAATATTTTT
Product: YhxB
Products: NA
Alternate protein names: PMM [H]
Number of amino acids: Translated: 551; Mature: 550
Protein sequence:
>551_residues MSIFTLAQHWLAQDPDPETHAELTALLDAAKTGDAKASTELNARFDGRLQFGTAGLRGRLQAGPMGMNRVLVAQAAGGLA DYLKDYDKTPSIVIGYDGRKNSDVFARDTAEIMAGAGIKAYLLPRKLPTPVLAYAIKYFDTTAGVMVTASHNPPEDNGYK VYLGKANGGGQIVSPADQDIAKLIDKVAAGSIKDLPRSQDFIVLDDEVVDAYIAKTASLAKEPQTDINYVYTAMHGVGYE VLSKTLAKAGLPQPHLVAEQVWPDGTFPTVNFPNPEEKGALDLAIKVAKEKNAEFIIANDPDADRLAVAVPDAEGNWKPL HGNVVGCFLGWYLAKQYHAQGQKGILACSLVSSPALAEIAKKYGFQSEETLTGFKYIGKVDGLLFGFEEALGYLVDPDKV RDKDGISAAISFLDLVRYLKKQGKTLADYADEFTQEFGAYVSGQISIRVDDLSEIGKLMSALRQNPPSDIGGFKVAQFLD HTKTDRQSDILVFVLENGSRLIVRPSGTEPKIKFYLDAKGKDPKDAEQVLAQFDESVRHILRQDEFGKQDC
Sequences:
>Translated_551_residues MSIFTLAQHWLAQDPDPETHAELTALLDAAKTGDAKASTELNARFDGRLQFGTAGLRGRLQAGPMGMNRVLVAQAAGGLA DYLKDYDKTPSIVIGYDGRKNSDVFARDTAEIMAGAGIKAYLLPRKLPTPVLAYAIKYFDTTAGVMVTASHNPPEDNGYK VYLGKANGGGQIVSPADQDIAKLIDKVAAGSIKDLPRSQDFIVLDDEVVDAYIAKTASLAKEPQTDINYVYTAMHGVGYE VLSKTLAKAGLPQPHLVAEQVWPDGTFPTVNFPNPEEKGALDLAIKVAKEKNAEFIIANDPDADRLAVAVPDAEGNWKPL HGNVVGCFLGWYLAKQYHAQGQKGILACSLVSSPALAEIAKKYGFQSEETLTGFKYIGKVDGLLFGFEEALGYLVDPDKV RDKDGISAAISFLDLVRYLKKQGKTLADYADEFTQEFGAYVSGQISIRVDDLSEIGKLMSALRQNPPSDIGGFKVAQFLD HTKTDRQSDILVFVLENGSRLIVRPSGTEPKIKFYLDAKGKDPKDAEQVLAQFDESVRHILRQDEFGKQDC >Mature_550_residues SIFTLAQHWLAQDPDPETHAELTALLDAAKTGDAKASTELNARFDGRLQFGTAGLRGRLQAGPMGMNRVLVAQAAGGLAD YLKDYDKTPSIVIGYDGRKNSDVFARDTAEIMAGAGIKAYLLPRKLPTPVLAYAIKYFDTTAGVMVTASHNPPEDNGYKV YLGKANGGGQIVSPADQDIAKLIDKVAAGSIKDLPRSQDFIVLDDEVVDAYIAKTASLAKEPQTDINYVYTAMHGVGYEV LSKTLAKAGLPQPHLVAEQVWPDGTFPTVNFPNPEEKGALDLAIKVAKEKNAEFIIANDPDADRLAVAVPDAEGNWKPLH GNVVGCFLGWYLAKQYHAQGQKGILACSLVSSPALAEIAKKYGFQSEETLTGFKYIGKVDGLLFGFEEALGYLVDPDKVR DKDGISAAISFLDLVRYLKKQGKTLADYADEFTQEFGAYVSGQISIRVDDLSEIGKLMSALRQNPPSDIGGFKVAQFLDH TKTDRQSDILVFVLENGSRLIVRPSGTEPKIKFYLDAKGKDPKDAEQVLAQFDESVRHILRQDEFGKQDC
Specific function: This Enzyme Participates In Both The Breakdown And Synthesis Of Glucose. [C]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI63055049, Length=590, Percent_Identity=33.728813559322, Blast_Score=285, Evalue=1e-76, Organism=Homo sapiens, GI31377548, Length=563, Percent_Identity=33.7477797513321, Blast_Score=270, Evalue=3e-72, Organism=Escherichia coli, GI1786904, Length=505, Percent_Identity=24.950495049505, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1789566, Length=503, Percent_Identity=25.844930417495, Blast_Score=70, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71993870, Length=588, Percent_Identity=34.1836734693878, Blast_Score=289, Evalue=3e-78, Organism=Caenorhabditis elegans, GI71993878, Length=314, Percent_Identity=36.624203821656, Blast_Score=182, Evalue=6e-46, Organism=Saccharomyces cerevisiae, GI6323934, Length=612, Percent_Identity=35.9477124183007, Blast_Score=280, Evalue=3e-76, Organism=Drosophila melanogaster, GI20129809, Length=594, Percent_Identity=35.016835016835, Blast_Score=289, Evalue=4e-78, Organism=Drosophila melanogaster, GI24651977, Length=553, Percent_Identity=35.2622061482821, Blast_Score=265, Evalue=5e-71, Organism=Drosophila melanogaster, GI24653722, Length=493, Percent_Identity=33.0628803245436, Blast_Score=229, Evalue=4e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.8 [H]
Molecular weight: Translated: 59900; Mature: 59769
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFTLAQHWLAQDPDPETHAELTALLDAAKTGDAKASTELNARFDGRLQFGTAGLRGRL CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCEEEECCCCCCCCC QAGPMGMNRVLVAQAAGGLADYLKDYDKTPSIVIGYDGRKNSDVFARDTAEIMAGAGIKA CCCCCCCCEEEEEHHCCCHHHHHHHHCCCCCEEEECCCCCCCCEEHHHHHHHHHCCCCEE YLLPRKLPTPVLAYAIKYFDTTAGVMVTASHNPPEDNGYKVYLGKANGGGQIVSPADQDI EECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCHHHH AKLIDKVAAGSIKDLPRSQDFIVLDDEVVDAYIAKTASLAKEPQTDINYVYTAMHGVGYE HHHHHHHHCCCHHCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHH VLSKTLAKAGLPQPHLVAEQVWPDGTFPTVNFPNPEEKGALDLAIKVAKEKNAEFIIAND HHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECC PDADRLAVAVPDAEGNWKPLHGNVVGCFLGWYLAKQYHAQGQKGILACSLVSSPALAEIA CCCCEEEEEECCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHH KKYGFQSEETLTGFKYIGKVDGLLFGFEEALGYLVDPDKVRDKDGISAAISFLDLVRYLK HHHCCCCCHHHHHHHHHHHHHHHHEEHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHH KQGKTLADYADEFTQEFGAYVSGQISIRVDDLSEIGKLMSALRQNPPSDIGGFKVAQFLD HCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH HTKTDRQSDILVFVLENGSRLIVRPSGTEPKIKFYLDAKGKDPKDAEQVLAQFDESVRHI HHCCCCCCCEEEEEEECCCEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHH LRQDEFGKQDC HHCCCCCCCCC >Mature Secondary Structure SIFTLAQHWLAQDPDPETHAELTALLDAAKTGDAKASTELNARFDGRLQFGTAGLRGRL CHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCEEEECCCCCCCCC QAGPMGMNRVLVAQAAGGLADYLKDYDKTPSIVIGYDGRKNSDVFARDTAEIMAGAGIKA CCCCCCCCEEEEEHHCCCHHHHHHHHCCCCCEEEECCCCCCCCEEHHHHHHHHHCCCCEE YLLPRKLPTPVLAYAIKYFDTTAGVMVTASHNPPEDNGYKVYLGKANGGGQIVSPADQDI EECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCHHHH AKLIDKVAAGSIKDLPRSQDFIVLDDEVVDAYIAKTASLAKEPQTDINYVYTAMHGVGYE HHHHHHHHCCCHHCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHH VLSKTLAKAGLPQPHLVAEQVWPDGTFPTVNFPNPEEKGALDLAIKVAKEKNAEFIIAND HHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECC PDADRLAVAVPDAEGNWKPLHGNVVGCFLGWYLAKQYHAQGQKGILACSLVSSPALAEIA CCCCEEEEEECCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHH KKYGFQSEETLTGFKYIGKVDGLLFGFEEALGYLVDPDKVRDKDGISAAISFLDLVRYLK HHHCCCCCHHHHHHHHHHHHHHHHEEHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHH KQGKTLADYADEFTQEFGAYVSGQISIRVDDLSEIGKLMSALRQNPPSDIGGFKVAQFLD HCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH HTKTDRQSDILVFVLENGSRLIVRPSGTEPKIKFYLDAKGKDPKDAEQVLAQFDESVRHI HHCCCCCCCEEEEEEECCCEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHH LRQDEFGKQDC HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]