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The map label for this gene is opa [H]

Identifier: 15602890

GI number: 15602890

Start: 1208104

End: 1208664

Strand: Reverse

Name: opa [H]

Synonym: PM1025

Alternate gene names: 15602890

Gene position: 1208664-1208104 (Counterclockwise)

Preceding gene: 15602891

Following gene: 15602889

Centisome position: 53.54

GC content: 34.4

Gene sequence:

>561_bases
ATGATGAAAAAATCACTACTTGTATTGGCTATCGGTGCATTATGTTCATTGACGGCAAGTGCTAATTTTTATGTTCAGGG
GGATTTGGGAGTTGCAAAAACAAAATTCAGCTCATATTCTGAAATGAACAAGACGAATATTGTACCAAATGTGAGTGTTG
GCTATGATTTGGGGGCTATGCGTTTAGCTTTGGATTATACTCATTATGGTAAGTTTTCAGGGACTTCCTACTTTGGTGTA
AATCAGAAAGAACATGTTTCTACAAAGATTTATGGTTTAGGTCTTTCAGCATTTTATGATTTTAATATCAATTCTGTTTT
AAAACCTTATGTAGGTATGCGTTTGGCATCAAATATTTTTGATATTGAGAATAAAGGTAGCAATTTCTTCAGAAGTGAGA
AAACGACTAAATTAGGCTATGGCTTTATTGCTGGCGCTCAATACGGCTTAATGACAAATTTATTTGTTAATGGTGGCATT
GAATATAATCGATTAGGTCGTTTCTCTGATACTTCTGTTAACCAATACGGCGCAAAAGTGGGTTTACGTTACGATTTCTA
A

Upstream 100 bases:

>100_bases
AAGAAATGTAAAGTTGAGTTAATTTTGCAATGATTTCTCCAAATAAAGTGCTATACTCATTTTGCGACATGATTTAATCA
GTAATTTTAAAGAGGATCTA

Downstream 100 bases:

>100_bases
GCAGATTGCCTAATTAAACGTTGTTTAAATGGTGCGGTGGAAAAAGTGAAACTTTCTACCGCACTTTTTTTGCGCTTAAT
AGTAGTATTTTCCCTTGAAA

Product: Opa

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MMKKSLLVLAIGALCSLTASANFYVQGDLGVAKTKFSSYSEMNKTNIVPNVSVGYDLGAMRLALDYTHYGKFSGTSYFGV
NQKEHVSTKIYGLGLSAFYDFNINSVLKPYVGMRLASNIFDIENKGSNFFRSEKTTKLGYGFIAGAQYGLMTNLFVNGGI
EYNRLGRFSDTSVNQYGAKVGLRYDF

Sequences:

>Translated_186_residues
MMKKSLLVLAIGALCSLTASANFYVQGDLGVAKTKFSSYSEMNKTNIVPNVSVGYDLGAMRLALDYTHYGKFSGTSYFGV
NQKEHVSTKIYGLGLSAFYDFNINSVLKPYVGMRLASNIFDIENKGSNFFRSEKTTKLGYGFIAGAQYGLMTNLFVNGGI
EYNRLGRFSDTSVNQYGAKVGLRYDF
>Mature_186_residues
MMKKSLLVLAIGALCSLTASANFYVQGDLGVAKTKFSSYSEMNKTNIVPNVSVGYDLGAMRLALDYTHYGKFSGTSYFGV
NQKEHVSTKIYGLGLSAFYDFNINSVLKPYVGMRLASNIFDIENKGSNFFRSEKTTKLGYGFIAGAQYGLMTNLFVNGGI
EYNRLGRFSDTSVNQYGAKVGLRYDF

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the opacity porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR003394 [H]

Pfam domain/function: PF02462 Opacity [H]

EC number: NA

Molecular weight: Translated: 20513; Mature: 20513

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKSLLVLAIGALCSLTASANFYVQGDLGVAKTKFSSYSEMNKTNIVPNVSVGYDLGAM
CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCEEHHHCCHHHCCCCCCCCCCCCCCCCCEE
RLALDYTHYGKFSGTSYFGVNQKEHVSTKIYGLGLSAFYDFNINSVLKPYVGMRLASNIF
EEEEEECCCCCCCCCEEECCCCCHHCEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHH
DIENKGSNFFRSEKTTKLGYGFIAGAQYGLMTNLFVNGGIEYNRLGRFSDTSVNQYGAKV
CCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCHHHCCCCCCCCCHHCCCEE
GLRYDF
EEEECC
>Mature Secondary Structure
MMKKSLLVLAIGALCSLTASANFYVQGDLGVAKTKFSSYSEMNKTNIVPNVSVGYDLGAM
CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCEEHHHCCHHHCCCCCCCCCCCCCCCCCEE
RLALDYTHYGKFSGTSYFGVNQKEHVSTKIYGLGLSAFYDFNINSVLKPYVGMRLASNIF
EEEEEECCCCCCCCCEEECCCCCHHCEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHH
DIENKGSNFFRSEKTTKLGYGFIAGAQYGLMTNLFVNGGIEYNRLGRFSDTSVNQYGAKV
CCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCHHHCCCCCCCCCHHCCCEE
GLRYDF
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]