Click here to switch to the map view.

The map label for this gene is 15602886

Identifier: 15602886

GI number: 15602886

Start: 1203725

End: 1204411

Strand: Reverse

Name: 15602886

Synonym: PM1021

Alternate gene names: NA

Gene position: 1204411-1203725 (Counterclockwise)

Preceding gene: 15602887

Following gene: 15602885

Centisome position: 53.35

GC content: 41.34

Gene sequence:

>687_bases
ATGAGCTTTCTCTTTACACCCGAGCAATTAACCGGTAAGGCACGCACACATTTAGTTGCACTCCCTTGCCCATTTTCTGT
CCATCATTTCTTACACCAAGATTGCTTAGTGGCTTTTCAATGTTTACAGCAAAGTGCGGCTAAACATGGCTTTAATTTAC
AGCCAGCCAGTAGCTTTCGTGACTTTCAACGTCAACAAGCCATTTGGAATGCGAAATTTTATGGTGAGCGTAAAGTGCAT
GATGATCAGGGAAATCCGCTCGATTTGAGTACACTTTCCGACTGGGAAAAAGTACAAGCTATTTTACGTTGGTCTGCTTT
GCCGGGTGGTAGTCGTCATCATTGGGGCACGGAAATTGATGTTTTTGATCCGCACTTATTGCCTCCTCATCAAACTTTAC
AACTTGAACCTTGGGAATATGAACAAGGCGGTTATTTCTTTGAATTAAGTGACTGGTTGCAACAAAATCTCGCTCATTTT
GATTTTGCCTTGCCTTTCACGCAGTTATCACAAGATAAAGAAATTGGTTATGAACCTTGGCATATCAGTTATTTACCGAT
TGCACAACAAGCCCAACAACAGTTTAATGCAGATATATTATGTGAGGCATGGCTGCAGGAAGAAATTGCGGGCAAAGCCT
GTTTGCTTGCGAATCTCGCGCAGATTTTTTGTCGTTTTTTTATTTAA

Upstream 100 bases:

>100_bases
ATAAAACTATTCATAAAGTCGATGAATGTGTCAATGTAGATGATCTGGCAAAATGTGGTGAAGTATATCAGCACGTTTTG
TGTAATATGTTGGAACGCGT

Downstream 100 bases:

>100_bases
GGAGATAACATGGAAATTCAACAGTTTCGTCAGCAAGATATTGACATTCTTAAAGAAGAAACCTTATACCAAGGTTTTTT
TCAATTAAAAAAGATTCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSFLFTPEQLTGKARTHLVALPCPFSVHHFLHQDCLVAFQCLQQSAAKHGFNLQPASSFRDFQRQQAIWNAKFYGERKVH
DDQGNPLDLSTLSDWEKVQAILRWSALPGGSRHHWGTEIDVFDPHLLPPHQTLQLEPWEYEQGGYFFELSDWLQQNLAHF
DFALPFTQLSQDKEIGYEPWHISYLPIAQQAQQQFNADILCEAWLQEEIAGKACLLANLAQIFCRFFI

Sequences:

>Translated_228_residues
MSFLFTPEQLTGKARTHLVALPCPFSVHHFLHQDCLVAFQCLQQSAAKHGFNLQPASSFRDFQRQQAIWNAKFYGERKVH
DDQGNPLDLSTLSDWEKVQAILRWSALPGGSRHHWGTEIDVFDPHLLPPHQTLQLEPWEYEQGGYFFELSDWLQQNLAHF
DFALPFTQLSQDKEIGYEPWHISYLPIAQQAQQQFNADILCEAWLQEEIAGKACLLANLAQIFCRFFI
>Mature_227_residues
SFLFTPEQLTGKARTHLVALPCPFSVHHFLHQDCLVAFQCLQQSAAKHGFNLQPASSFRDFQRQQAIWNAKFYGERKVHD
DQGNPLDLSTLSDWEKVQAILRWSALPGGSRHHWGTEIDVFDPHLLPPHQTLQLEPWEYEQGGYFFELSDWLQQNLAHFD
FALPFTQLSQDKEIGYEPWHISYLPIAQQAQQQFNADILCEAWLQEEIAGKACLLANLAQIFCRFFI

Specific function: Unknown

COG id: COG1876

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003709 [H]

Pfam domain/function: PF02557 VanY [H]

EC number: NA

Molecular weight: Translated: 26413; Mature: 26282

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLFTPEQLTGKARTHLVALPCPFSVHHFLHQDCLVAFQCLQQSAAKHGFNLQPASSFR
CCCCCCHHHHCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
DFQRQQAIWNAKFYGERKVHDDQGNPLDLSTLSDWEKVQAILRWSALPGGSRHHWGTEID
HHHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEC
VFDPHLLPPHQTLQLEPWEYEQGGYFFELSDWLQQNLAHFDFALPFTQLSQDKEIGYEPW
CCCCCCCCCCCCEEECCCEECCCCEEEEHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCE
HISYLPIAQQAQQQFNADILCEAWLQEEIAGKACLLANLAQIFCRFFI
EEEECCHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFLFTPEQLTGKARTHLVALPCPFSVHHFLHQDCLVAFQCLQQSAAKHGFNLQPASSFR
CCCCCHHHHCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
DFQRQQAIWNAKFYGERKVHDDQGNPLDLSTLSDWEKVQAILRWSALPGGSRHHWGTEID
HHHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEC
VFDPHLLPPHQTLQLEPWEYEQGGYFFELSDWLQQNLAHFDFALPFTQLSQDKEIGYEPW
CCCCCCCCCCCCEEECCCEECCCCEEEEHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCE
HISYLPIAQQAQQQFNADILCEAWLQEEIAGKACLLANLAQIFCRFFI
EEEECCHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]