| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is amsI [H]
Identifier: 15602882
GI number: 15602882
Start: 1199452
End: 1199895
Strand: Direct
Name: amsI [H]
Synonym: PM1017
Alternate gene names: 15602882
Gene position: 1199452-1199895 (Clockwise)
Preceding gene: 15602881
Following gene: 15602883
Centisome position: 53.13
GC content: 38.06
Gene sequence:
>444_bases ATGTTTGAGCAAATTCTAGTCGTATGTATGGGAAATATCTGTCGTTCCCCTGTAGGGGAAAAATTACTGCAACACCATTT CCCAGAAAAAAACATTACCTCTGCAGGTCTTGTCACTGAACGTAGTCGATTAGTTGACAAGCCTGCCGACGATATGATGA TAAAAATTGCTAGCCAGCACGGATTAAATCTTTCGGCTCATCGTGCTAAGCAGTTGACACATGCATTATGTCATAAAGCC GATTTGATTCTTGTTATGGAAAAAGCGCATATTGAATTAGTTCATCAAATATGCCCTTTATCTCAAGGTAAAGTCATGTT GTTTGGACATGGATTAACTGCGTCAAAAGAGATTCCCGATCCCTATAAAAAGAGTCAAGAAATGTTTGAGTATGCTTATC AAATGCTAGATAGCGCAGCATATCAATGGAAAAAAATGTTATAG
Upstream 100 bases:
>100_bases CCAGTTGCCCGCTGGAATCGTGTGATTAGTCAGATCGTGCCTACTTTGTCAGGGTTCGACTCAATCACTGAAAGTATGTT AAGAATCCGAAATTGGTAAT
Downstream 100 bases:
>100_bases GATATGAAATAATGAACGAGAAAAACCATGAAGAAACACTTGATGTAATGAAATTCCTCGGCATTTTATTAGATCATAAA GGGTGGATTGCCCTGTTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MFEQILVVCMGNICRSPVGEKLLQHHFPEKNITSAGLVTERSRLVDKPADDMMIKIASQHGLNLSAHRAKQLTHALCHKA DLILVMEKAHIELVHQICPLSQGKVMLFGHGLTASKEIPDPYKKSQEMFEYAYQMLDSAAYQWKKML
Sequences:
>Translated_147_residues MFEQILVVCMGNICRSPVGEKLLQHHFPEKNITSAGLVTERSRLVDKPADDMMIKIASQHGLNLSAHRAKQLTHALCHKA DLILVMEKAHIELVHQICPLSQGKVMLFGHGLTASKEIPDPYKKSQEMFEYAYQMLDSAAYQWKKML >Mature_147_residues MFEQILVVCMGNICRSPVGEKLLQHHFPEKNITSAGLVTERSRLVDKPADDMMIKIASQHGLNLSAHRAKQLTHALCHKA DLILVMEKAHIELVHQICPLSQGKVMLFGHGLTASKEIPDPYKKSQEMFEYAYQMLDSAAYQWKKML
Specific function: May function as a phosphatase required for amylovoran (an exopolysaccharide that functions as a virulence factor) production [H]
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1788375, Length=147, Percent_Identity=50.3401360544218, Blast_Score=147, Evalue=4e-37, Organism=Escherichia coli, GI87081812, Length=146, Percent_Identity=47.945205479452, Blast_Score=130, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000106 - InterPro: IPR017867 [H]
Pfam domain/function: PF01451 LMWPc [H]
EC number: =3.1.3.48 [H]
Molecular weight: Translated: 16671; Mature: 16671
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEQILVVCMGNICRSPVGEKLLQHHFPEKNITSAGLVTERSRLVDKPADDMMIKIASQH CHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHC GLNLSAHRAKQLTHALCHKADLILVMEKAHIELVHQICPLSQGKVMLFGHGLTASKEIPD CCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCC PYKKSQEMFEYAYQMLDSAAYQWKKML HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFEQILVVCMGNICRSPVGEKLLQHHFPEKNITSAGLVTERSRLVDKPADDMMIKIASQH CHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHC GLNLSAHRAKQLTHALCHKADLILVMEKAHIELVHQICPLSQGKVMLFGHGLTASKEIPD CCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCC PYKKSQEMFEYAYQMLDSAAYQWKKML HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7596293 [H]