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The map label for this gene is rfb [H]

Identifier: 15602880

GI number: 15602880

Start: 1196239

End: 1198185

Strand: Direct

Name: rfb [H]

Synonym: PM1015

Alternate gene names: 15602880

Gene position: 1196239-1198185 (Clockwise)

Preceding gene: 15602879

Following gene: 15602881

Centisome position: 52.99

GC content: 38.78

Gene sequence:

>1947_bases
ATGAATATGCATTATTTAATCACTTCCTTAACACTGCTTTCTAAAACGAATAAAAAGATTTTTTTATTGGTGTTAGATTT
CATTGCATGCCCAATTCTGCTTTGGCAATGTTATATGCTGAGATATTGGAGTATAGAAATTTCAGTAAATTTACCATTTT
TATTGGGTATTTCGTTACTCACTGTAGGAAGCCTCCTTTTGTTTGGTGTGTATGACTTCATTATCCGTAGTTTTAGCGAA
ACGTTAATTTTACGCTTAGGTTTAGCCACCATTATCACCGTGCTTAATCTTTATCTTGTGACGTTCATTGCGGAAGAAAT
GTTACCGAGATCGATTCCGCTAATGTATGGTTTTTTAATGTTCACTTGGATTTGGCTCAGCCGTGGCATTATACGCTTTA
TCGTAAAAGCACACTTAACTACAAAAGCCCCCAAAATACGTATTGTTGTTTACGGTGCAGGCGCATCAGGACAACAAATT
ATCAGCGCACTACAACGTTCTTGTGAGTACTTACCTTTATTTTTTATTGATGATAATAAGCAACTTTGGGGAAGAACCTT
AGGTGGTTTCAAAGTCTATTCTTTCGAAACTGCCATGACCTTGTTAAAAGACTATCGTGTTGATGAAATCTTAATTGCGC
TTCCTTCTGTCAGTCGGGAACGTCGAAGAGAGCTCATTAAAAAGCTGAATAAAACACCTTGTAAAATAAAAGAATTACCG
AGCTTACAACAACTCGTGGATGGCGAAGTAGGGCTTTCTGACATTCAAGAAATTGCTATCGAAGATCTCTTAGGGCGCGA
TCCAGTCCCCCCAATCACCGCTTTATTAAATAAAAATATCCAACATAAGTCCGTTATGGTAACTGGCGCTGGCGGTTCAA
TTGGTTCCGAATTATGTCGGCAAATTCTGTTAAATCATCCGACGAAATTAGTGCTATTTGATGTTTCAGAATATGCCCTC
TACTCTATCCATCTTGAGTTATTACATATTCAGCAAGAGAAAGGAACACACGTGGAAATTATCCCACTGTTAGGCTCTGT
ACAAAATCTCAAGCTGCTTATCAAAGTCATGCAAACTTTTGAAGTTAATACGGTATACCATGCTGCTGCGTATAAACATG
TTCCATTAGTTGAATACAATGTCATACAAGCGGTATACAACAACATTTTTGGCACATATAACGCAGCTAAAGCGGCGATG
CGATGCCAAGTCGATGCCTTTGTATTAATTTCTACCGATAAAGCCGTAAGACCCACAAATGTGATGGGCACAACAAAACG
TGTTGCAGAATTGTGTTTACAAGCCTGTGCCGATACCTATGGTAAAACCCTAGACGGCGTCGTCCATAAAACCCTTTTCT
GTATGGTCCGTTTTGGCAATGTATTAGGTTCCTCAGGCTCTGTTATTCCTTTATTTAAACAACAAATTAAAGAAGGGGGA
CCGATTACTGTAACAGACGAACGTATCATCCGTTATTTCATGACGATCCCTGAAGCTGCACAGCTTGTTATTCAGGCAGG
GGCTATGGCAAAAGGAGGAGATGTGTTTATCCTCGATATGGGCGAACCCGTTAAGATTCTTGAATTAGCGAAGAAATTAA
TTTTACTTTCCGGTCTCAGTATCAAAAATGAAAACAATCCAAATGGTGATATTGAAATTAAATTCACGGGCTTACGTCCC
GGAGAAAAACTTTATGAAGAACTCCTCATTGGCGGAGAAAATGTCAGAAAAACGTTGCATCCACGAATCCTAACCGCGCA
AGAAACATGTCTTCCTTTTTCGGAGTTGTCCTTACTCTTAGACGAATTGGAGCGTGCATGTAAAAAATCAGATTATCAAA
AAATTCATGACATTTTGCGCAATGCACCGACAGGATATCAACCTGTCACAGAATTAGCAGACTTAATTTACACTCAACAA
AATAATCACATACATCTATGGGGGTAA

Upstream 100 bases:

>100_bases
ATGTTTTTAGTCCATCCCACATTAACTGAATCAGACATCAGTCGATGTGTGGAAGTGATAAAAACAGTAATTGAACAAAT
TTAAATGGCGTTTAGAACTT

Downstream 100 bases:

>100_bases
AGCAACGGTGAACATCAATAAATAAACTGTATCCAGATGAACAAAAAACCGAGGTAGCTGTAAGCCTTTCACTTATTCAC
TAATTAAAATGAGTAAAAGA

Product: Rfb

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 648; Mature: 648

Protein sequence:

>648_residues
MNMHYLITSLTLLSKTNKKIFLLVLDFIACPILLWQCYMLRYWSIEISVNLPFLLGISLLTVGSLLLFGVYDFIIRSFSE
TLILRLGLATIITVLNLYLVTFIAEEMLPRSIPLMYGFLMFTWIWLSRGIIRFIVKAHLTTKAPKIRIVVYGAGASGQQI
ISALQRSCEYLPLFFIDDNKQLWGRTLGGFKVYSFETAMTLLKDYRVDEILIALPSVSRERRRELIKKLNKTPCKIKELP
SLQQLVDGEVGLSDIQEIAIEDLLGRDPVPPITALLNKNIQHKSVMVTGAGGSIGSELCRQILLNHPTKLVLFDVSEYAL
YSIHLELLHIQQEKGTHVEIIPLLGSVQNLKLLIKVMQTFEVNTVYHAAAYKHVPLVEYNVIQAVYNNIFGTYNAAKAAM
RCQVDAFVLISTDKAVRPTNVMGTTKRVAELCLQACADTYGKTLDGVVHKTLFCMVRFGNVLGSSGSVIPLFKQQIKEGG
PITVTDERIIRYFMTIPEAAQLVIQAGAMAKGGDVFILDMGEPVKILELAKKLILLSGLSIKNENNPNGDIEIKFTGLRP
GEKLYEELLIGGENVRKTLHPRILTAQETCLPFSELSLLLDELERACKKSDYQKIHDILRNAPTGYQPVTELADLIYTQQ
NNHIHLWG

Sequences:

>Translated_648_residues
MNMHYLITSLTLLSKTNKKIFLLVLDFIACPILLWQCYMLRYWSIEISVNLPFLLGISLLTVGSLLLFGVYDFIIRSFSE
TLILRLGLATIITVLNLYLVTFIAEEMLPRSIPLMYGFLMFTWIWLSRGIIRFIVKAHLTTKAPKIRIVVYGAGASGQQI
ISALQRSCEYLPLFFIDDNKQLWGRTLGGFKVYSFETAMTLLKDYRVDEILIALPSVSRERRRELIKKLNKTPCKIKELP
SLQQLVDGEVGLSDIQEIAIEDLLGRDPVPPITALLNKNIQHKSVMVTGAGGSIGSELCRQILLNHPTKLVLFDVSEYAL
YSIHLELLHIQQEKGTHVEIIPLLGSVQNLKLLIKVMQTFEVNTVYHAAAYKHVPLVEYNVIQAVYNNIFGTYNAAKAAM
RCQVDAFVLISTDKAVRPTNVMGTTKRVAELCLQACADTYGKTLDGVVHKTLFCMVRFGNVLGSSGSVIPLFKQQIKEGG
PITVTDERIIRYFMTIPEAAQLVIQAGAMAKGGDVFILDMGEPVKILELAKKLILLSGLSIKNENNPNGDIEIKFTGLRP
GEKLYEELLIGGENVRKTLHPRILTAQETCLPFSELSLLLDELERACKKSDYQKIHDILRNAPTGYQPVTELADLIYTQQ
NNHIHLWG
>Mature_648_residues
MNMHYLITSLTLLSKTNKKIFLLVLDFIACPILLWQCYMLRYWSIEISVNLPFLLGISLLTVGSLLLFGVYDFIIRSFSE
TLILRLGLATIITVLNLYLVTFIAEEMLPRSIPLMYGFLMFTWIWLSRGIIRFIVKAHLTTKAPKIRIVVYGAGASGQQI
ISALQRSCEYLPLFFIDDNKQLWGRTLGGFKVYSFETAMTLLKDYRVDEILIALPSVSRERRRELIKKLNKTPCKIKELP
SLQQLVDGEVGLSDIQEIAIEDLLGRDPVPPITALLNKNIQHKSVMVTGAGGSIGSELCRQILLNHPTKLVLFDVSEYAL
YSIHLELLHIQQEKGTHVEIIPLLGSVQNLKLLIKVMQTFEVNTVYHAAAYKHVPLVEYNVIQAVYNNIFGTYNAAKAAM
RCQVDAFVLISTDKAVRPTNVMGTTKRVAELCLQACADTYGKTLDGVVHKTLFCMVRFGNVLGSSGSVIPLFKQQIKEGG
PITVTDERIIRYFMTIPEAAQLVIQAGAMAKGGDVFILDMGEPVKILELAKKLILLSGLSIKNENNPNGDIEIKFTGLRP
GEKLYEELLIGGENVRKTLHPRILTAQETCLPFSELSLLLDELERACKKSDYQKIHDILRNAPTGYQPVTELADLIYTQQ
NNHIHLWG

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869 [H]

Pfam domain/function: PF02719 Polysacc_synt_2 [H]

EC number: NA

Molecular weight: Translated: 72798; Mature: 72798

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMHYLITSLTLLSKTNKKIFLLVLDFIACPILLWQCYMLRYWSIEISVNLPFLLGISLL
CCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHH
TVGSLLLFGVYDFIIRSFSETLILRLGLATIITVLNLYLVTFIAEEMLPRSIPLMYGFLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
FTWIWLSRGIIRFIVKAHLTTKAPKIRIVVYGAGASGQQIISALQRSCEYLPLFFIDDNK
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCH
QLWGRTLGGFKVYSFETAMTLLKDYRVDEILIALPSVSRERRRELIKKLNKTPCKIKELP
HHHHCCCCCEEEEEHHHHHHHHHHCCCCHHEEECCCCCHHHHHHHHHHHCCCCCCHHCCC
SLQQLVDGEVGLSDIQEIAIEDLLGRDPVPPITALLNKNIQHKSVMVTGAGGSIGSELCR
CHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEEECCCCHHHHHHH
QILLNHPTKLVLFDVSEYALYSIHLELLHIQQEKGTHVEIIPLLGSVQNLKLLIKVMQTF
HHHHCCCCEEEEEECCHHHHHHEEHHHEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHH
EVNTVYHAAAYKHVPLVEYNVIQAVYNNIFGTYNAAKAAMRCQVDAFVLISTDKAVRPTN
CCCCEEHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEEEEEECCCCCCCCC
VMGTTKRVAELCLQACADTYGKTLDGVVHKTLFCMVRFGNVLGSSGSVIPLFKQQIKEGG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCC
PITVTDERIIRYFMTIPEAAQLVIQAGAMAKGGDVFILDMGEPVKILELAKKLILLSGLS
CEEEEHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCC
IKNENNPNGDIEIKFTGLRPGEKLYEELLIGGENVRKTLHPRILTAQETCLPFSELSLLL
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHCCCEEECHHHCCCHHHHHHHH
DELERACKKSDYQKIHDILRNAPTGYQPVTELADLIYTQQNNHIHLWG
HHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHEECCCCEEEECC
>Mature Secondary Structure
MNMHYLITSLTLLSKTNKKIFLLVLDFIACPILLWQCYMLRYWSIEISVNLPFLLGISLL
CCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHH
TVGSLLLFGVYDFIIRSFSETLILRLGLATIITVLNLYLVTFIAEEMLPRSIPLMYGFLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
FTWIWLSRGIIRFIVKAHLTTKAPKIRIVVYGAGASGQQIISALQRSCEYLPLFFIDDNK
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCH
QLWGRTLGGFKVYSFETAMTLLKDYRVDEILIALPSVSRERRRELIKKLNKTPCKIKELP
HHHHCCCCCEEEEEHHHHHHHHHHCCCCHHEEECCCCCHHHHHHHHHHHCCCCCCHHCCC
SLQQLVDGEVGLSDIQEIAIEDLLGRDPVPPITALLNKNIQHKSVMVTGAGGSIGSELCR
CHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEEECCCCHHHHHHH
QILLNHPTKLVLFDVSEYALYSIHLELLHIQQEKGTHVEIIPLLGSVQNLKLLIKVMQTF
HHHHCCCCEEEEEECCHHHHHHEEHHHEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHH
EVNTVYHAAAYKHVPLVEYNVIQAVYNNIFGTYNAAKAAMRCQVDAFVLISTDKAVRPTN
CCCCEEHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEEEEEECCCCCCCCC
VMGTTKRVAELCLQACADTYGKTLDGVVHKTLFCMVRFGNVLGSSGSVIPLFKQQIKEGG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCC
PITVTDERIIRYFMTIPEAAQLVIQAGAMAKGGDVFILDMGEPVKILELAKKLILLSGLS
CEEEEHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCC
IKNENNPNGDIEIKFTGLRPGEKLYEELLIGGENVRKTLHPRILTAQETCLPFSELSLLL
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHCCCEEECHHHCCCHHHHHHHH
DELERACKKSDYQKIHDILRNAPTGYQPVTELADLIYTQQNNHIHLWG
HHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7961465 [H]