| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15602869
Identifier: 15602869
GI number: 15602869
Start: 1184592
End: 1185830
Strand: Direct
Name: 15602869
Synonym: PM1004
Alternate gene names: NA
Gene position: 1184592-1185830 (Clockwise)
Preceding gene: 15602868
Following gene: 15602870
Centisome position: 52.47
GC content: 28.97
Gene sequence:
>1239_bases ATGTTAATACGAAATACGCTATTACTCACAATAAGCCATATGTTATCTCGAGGAAGCTTAATTTTTTCTTCCGTGATCAT ATCAAGCTTAATGGATAAAGAACAATTCTCAATCTACAGTTATTTCATATTAACAACGACGACAATATCTATTTATTCTG CCTTGGGAATAGGAATCACGACAAATAAATTTTTTTCCTCATTAAAAAAAGAACTTAATTTAGAAACACCCGTGATGACA CTATGGATTATAAATATTAGCCTAGCAATCTTAGGAGGAGTAATATTCACTCTATTATCAGAACAAATCATTCCTAAATC AATTAACTTTAATAAAAATTATTTTGCTATTGTTATTCTTTTTTTATGCTTGGATATTTATACAAGCAATGCGCTCATTG GATTAGGAGAATATATAAAATTATGTATTACATCACTCCTTTTCTTTTGCATAAACATCATTATGGTGGTGATAGCAATT TTAAATAACAATATCGATTACGCGATACTAGGATTAATCTCTGGTGTTATAGTTCAACTGATTTTTAATACAGTATTCGT ACTCCGATATCTTTCGAGCATACAGCTTTTAGAGAAAGTAAATATAAAAATAGCCCACTTAAAAGAAATTTTAAAAACAA TGGGACCCATGATGTTTGTTTCTCTCTTTGCCGCATCGAATACTTGGATAGTAAGTCAATATATTTTAGTTTCAAACAGA GAAAGTGCCCTTGAGTTCAATCTCTTTTCAATAGGATTACAATGGTTTTCACTGGCGCTCTTTTTACCCTCTGTTTTTTC TAGAGTATTACTAAACTATTTTATCTCTCATACACATTCAAATAGTTTAGTCATAGCGAAAAGAAATATTGCGTTGATTC TTTCCCTATTTTTATTGCTCACATTTGTTTCATATATTGCATCACCCATCATTCAAGGGATTTATAGTAGATACACGATT CCTGCAATATTAATACCTTTATTCTTATTCATTGCAGGAATAAATTCATCTACAAACATATTAGGTAATATTTTGATTTC TCAAAATCAAGAATGGGTATGGTTAATTTTCGTAACAATTGGTTTTCTATTGCTAAACATACTTTGTGCTTTAATAAAAG AAATCGACAGCATGACTGGTACAGTCATTATGTTAATTAATAACATTCTTATATTTTCACTTTCTCTGTTTTATTTATTC GTTTATAAAAAACCTCATAAAGAAGAAATAAAAATATGA
Upstream 100 bases:
>100_bases AAAGATTTTAAAGCATTAGGGAAAGAAAATTTTGTCCTTTATGACCTGAAATATGTGTTAGATCAATCTCAAGCCAATAT TAGATTATGAATCTGAAATT
Downstream 100 bases:
>100_bases AATATCTCGTTATACTTATATTAAGCTTATTTTCATTACTGTTTATATCAACAACAGGAAATTTGTTCTTTGTATTAAGT ATAACTCTTACACTAATAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MLIRNTLLLTISHMLSRGSLIFSSVIISSLMDKEQFSIYSYFILTTTTISIYSALGIGITTNKFFSSLKKELNLETPVMT LWIINISLAILGGVIFTLLSEQIIPKSINFNKNYFAIVILFLCLDIYTSNALIGLGEYIKLCITSLLFFCINIIMVVIAI LNNNIDYAILGLISGVIVQLIFNTVFVLRYLSSIQLLEKVNIKIAHLKEILKTMGPMMFVSLFAASNTWIVSQYILVSNR ESALEFNLFSIGLQWFSLALFLPSVFSRVLLNYFISHTHSNSLVIAKRNIALILSLFLLLTFVSYIASPIIQGIYSRYTI PAILIPLFLFIAGINSSTNILGNILISQNQEWVWLIFVTIGFLLLNILCALIKEIDSMTGTVIMLINNILIFSLSLFYLF VYKKPHKEEIKI
Sequences:
>Translated_412_residues MLIRNTLLLTISHMLSRGSLIFSSVIISSLMDKEQFSIYSYFILTTTTISIYSALGIGITTNKFFSSLKKELNLETPVMT LWIINISLAILGGVIFTLLSEQIIPKSINFNKNYFAIVILFLCLDIYTSNALIGLGEYIKLCITSLLFFCINIIMVVIAI LNNNIDYAILGLISGVIVQLIFNTVFVLRYLSSIQLLEKVNIKIAHLKEILKTMGPMMFVSLFAASNTWIVSQYILVSNR ESALEFNLFSIGLQWFSLALFLPSVFSRVLLNYFISHTHSNSLVIAKRNIALILSLFLLLTFVSYIASPIIQGIYSRYTI PAILIPLFLFIAGINSSTNILGNILISQNQEWVWLIFVTIGFLLLNILCALIKEIDSMTGTVIMLINNILIFSLSLFYLF VYKKPHKEEIKI >Mature_412_residues MLIRNTLLLTISHMLSRGSLIFSSVIISSLMDKEQFSIYSYFILTTTTISIYSALGIGITTNKFFSSLKKELNLETPVMT LWIINISLAILGGVIFTLLSEQIIPKSINFNKNYFAIVILFLCLDIYTSNALIGLGEYIKLCITSLLFFCINIIMVVIAI LNNNIDYAILGLISGVIVQLIFNTVFVLRYLSSIQLLEKVNIKIAHLKEILKTMGPMMFVSLFAASNTWIVSQYILVSNR ESALEFNLFSIGLQWFSLALFLPSVFSRVLLNYFISHTHSNSLVIAKRNIALILSLFLLLTFVSYIASPIIQGIYSRYTI PAILIPLFLFIAGINSSTNILGNILISQNQEWVWLIFVTIGFLLLNILCALIKEIDSMTGTVIMLINNILIFSLSLFYLF VYKKPHKEEIKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46520; Mature: 46520
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIRNTLLLTISHMLSRGSLIFSSVIISSLMDKEQFSIYSYFILTTTTISIYSALGIGIT CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC TNKFFSSLKKELNLETPVMTLWIINISLAILGGVIFTLLSEQIIPKSINFNKNYFAIVIL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH FLCLDIYTSNALIGLGEYIKLCITSLLFFCINIIMVVIAILNNNIDYAILGLISGVIVQL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH IFNTVFVLRYLSSIQLLEKVNIKIAHLKEILKTMGPMMFVSLFAASNTWIVSQYILVSNR HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHEECCC ESALEFNLFSIGLQWFSLALFLPSVFSRVLLNYFISHTHSNSLVIAKRNIALILSLFLLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHH TFVSYIASPIIQGIYSRYTIPAILIPLFLFIAGINSSTNILGNILISQNQEWVWLIFVTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCEEEHHHHHH GFLLLNILCALIKEIDSMTGTVIMLINNILIFSLSLFYLFVYKKPHKEEIKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLIRNTLLLTISHMLSRGSLIFSSVIISSLMDKEQFSIYSYFILTTTTISIYSALGIGIT CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC TNKFFSSLKKELNLETPVMTLWIINISLAILGGVIFTLLSEQIIPKSINFNKNYFAIVIL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH FLCLDIYTSNALIGLGEYIKLCITSLLFFCINIIMVVIAILNNNIDYAILGLISGVIVQL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH IFNTVFVLRYLSSIQLLEKVNIKIAHLKEILKTMGPMMFVSLFAASNTWIVSQYILVSNR HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHEECCC ESALEFNLFSIGLQWFSLALFLPSVFSRVLLNYFISHTHSNSLVIAKRNIALILSLFLLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHH TFVSYIASPIIQGIYSRYTIPAILIPLFLFIAGINSSTNILGNILISQNQEWVWLIFVTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCEEEHHHHHH GFLLLNILCALIKEIDSMTGTVIMLINNILIFSLSLFYLFVYKKPHKEEIKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA