| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15602828
Identifier: 15602828
GI number: 15602828
Start: 1136413
End: 1137060
Strand: Reverse
Name: 15602828
Synonym: PM0963
Alternate gene names: NA
Gene position: 1137060-1136413 (Counterclockwise)
Preceding gene: 15602829
Following gene: 15602827
Centisome position: 50.37
GC content: 35.8
Gene sequence:
>648_bases ATGATCTATCATAAAGGTATGGTAACTTTCGTCATTTTAGTGTTATTAAGCAGTGGATTAACTATTTTAATGTTATTGAA TGACGATATTTTACATTGGCATTTGTCTGCGCTTCATCAACGGAAATTAGATGTCCAACAAATGTTAGTATTACAACGTC AGAACGAGGAAAAAAAGCAACATCTTTGTAAACATATCTCATCAACATCTTCGGAAAATCGGCAACAAGTCACTTTTCGT CTTGTTGAAGGTAAAGCGAATTATGTTTGGTGTATTTGTCGGACGTTATTTAAAGCACAACCTCGTCAAGCGCTTAATAT CGGGAAATTAGCGTATTTTATTCAACGAGAATATCGAGGTCTTTTCTCTCATCAATTTTCTGTCCAACATGCTCCCTATT TTTACTGGTTTGATACTAAACAAACGAGTTGGACGCTGACACAAAATATCGAGGCGATAATTATTGCTGAAGGCGATTTA CATATTCACGGAAAAGGGAAGATAAAAGGAACAATTGTGACTGGAGGGCGATTAACTTTAGAGCCAAGTGTGCAAGTAAG TTACCATAAAGCGACAGTAGCATATTGGGTAACACAATTACGAGATTGGCAATTAGCAGAGAAAAGTTGGCATGATTTTT TATTATGA
Upstream 100 bases:
>100_bases CTGCGCTTGAAATCTATTTGAAAGGATACTTAAAAAAACAGCCACATTTTCAATATGAAACGACAATGGTTGCACCACTC TTGAATCATGGAGAGAAGCA
Downstream 100 bases:
>100_bases TAAAGGCATGAGTTTACCTGTATTGTTAATGGCACTAATGTTGTTTAGTGGTATTTTCCTTTCAACACAGCAGTGGCTAA GTTATCAACGCCAACGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MIYHKGMVTFVILVLLSSGLTILMLLNDDILHWHLSALHQRKLDVQQMLVLQRQNEEKKQHLCKHISSTSSENRQQVTFR LVEGKANYVWCICRTLFKAQPRQALNIGKLAYFIQREYRGLFSHQFSVQHAPYFYWFDTKQTSWTLTQNIEAIIIAEGDL HIHGKGKIKGTIVTGGRLTLEPSVQVSYHKATVAYWVTQLRDWQLAEKSWHDFLL
Sequences:
>Translated_215_residues MIYHKGMVTFVILVLLSSGLTILMLLNDDILHWHLSALHQRKLDVQQMLVLQRQNEEKKQHLCKHISSTSSENRQQVTFR LVEGKANYVWCICRTLFKAQPRQALNIGKLAYFIQREYRGLFSHQFSVQHAPYFYWFDTKQTSWTLTQNIEAIIIAEGDL HIHGKGKIKGTIVTGGRLTLEPSVQVSYHKATVAYWVTQLRDWQLAEKSWHDFLL >Mature_215_residues MIYHKGMVTFVILVLLSSGLTILMLLNDDILHWHLSALHQRKLDVQQMLVLQRQNEEKKQHLCKHISSTSSENRQQVTFR LVEGKANYVWCICRTLFKAQPRQALNIGKLAYFIQREYRGLFSHQFSVQHAPYFYWFDTKQTSWTLTQNIEAIIIAEGDL HIHGKGKIKGTIVTGGRLTLEPSVQVSYHKATVAYWVTQLRDWQLAEKSWHDFLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022543 [H]
Pfam domain/function: PF10833 DUF2572 [H]
EC number: NA
Molecular weight: Translated: 25136; Mature: 25136
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYHKGMVTFVILVLLSSGLTILMLLNDDILHWHLSALHQRKLDVQQMLVLQRQNEEKKQ CEEECHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHH HLCKHISSTSSENRQQVTFRLVEGKANYVWCICRTLFKAQPRQALNIGKLAYFIQREYRG HHHHHHHCCCCCCCCEEEEEEEECCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LFSHQFSVQHAPYFYWFDTKQTSWTLTQNIEAIIIAEGDLHIHGKGKIKGTIVTGGRLTL HHHCCEECCCCCEEEEEECCCCEEEEECCCCEEEEECCCEEEEECCEEEEEEEECCEEEE EPSVQVSYHKATVAYWVTQLRDWQLAEKSWHDFLL CCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure MIYHKGMVTFVILVLLSSGLTILMLLNDDILHWHLSALHQRKLDVQQMLVLQRQNEEKKQ CEEECHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHH HLCKHISSTSSENRQQVTFRLVEGKANYVWCICRTLFKAQPRQALNIGKLAYFIQREYRG HHHHHHHCCCCCCCCEEEEEEEECCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LFSHQFSVQHAPYFYWFDTKQTSWTLTQNIEAIIIAEGDLHIHGKGKIKGTIVTGGRLTL HHHCCEECCCCCEEEEEECCCCEEEEECCCCEEEEECCCEEEEECCEEEEEEEECCEEEE EPSVQVSYHKATVAYWVTQLRDWQLAEKSWHDFLL CCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]