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The map label for this gene is rcpA [C]

Identifier: 15602717

GI number: 15602717

Start: 1003010

End: 1004422

Strand: Reverse

Name: rcpA [C]

Synonym: PM0852

Alternate gene names: 15602717

Gene position: 1004422-1003010 (Counterclockwise)

Preceding gene: 15602718

Following gene: 15602716

Centisome position: 44.49

GC content: 36.66

Gene sequence:

>1413_bases
ATGAATAATAAATGTATAACAAAAAAATGGCTTTCTGTGTTATTAATTGGAAGCGGATTGATTTGGTCATCTTTAGTGTA
TTCTAAAACCTTTAATTTAGAGCAAGGTGGAACAAAACTTGTTCGTACTGACGAGAAAATTGATACGATCTTTGTTTCTT
CGCCTTCCGTAGCCGATTATGAAATTTTGGATGATAATAGTTTTATTATTTATGCCAAAGAAGAAGGAAGAGCGGAAGTT
ACGGCATTCGGTCAAGATGGTAAGCCCTTGACAACGGACTTTATCAATGTGAATCCATTAATTAGTAATATCAACGATAT
ATCTGATACAAATCGTCAAATTAAAGCACGCTTTCCTAATTCAAACCTCTCAGTTAAAAAAGTCGGTAAGGCATATGTGA
TAGAAGGGAAAGCGCGGACGCAAGAGGAAAGTGAAGAAGCACATCGTATTGTGGGTGAAGCCTTAGGGAATAGTAAGAAA
GTAACAGAAACAAGTTTTAATCGTTCTGAAGGCGTTAAAGAATATATTCCATTTTTGGATAAATATCAATTTGATGGTGT
AATTAATAATGCAAGTGTGGCGGATTCAACACAAATTAATGTGAAACTCTCTGTTGTCGAAGTTAATAAGAAACTCACTG
AAGCTTTAGGTATTAACTGGGGAAGAGTGGTTGGTGTCCATAGTGGACCGTTACTTGGTGGAAGTGTTTCTTTAAGCGGT
GGTTTCAGCGGAAGTGGTGGTTCAACGCTTAATATAAATGCAACCGGTGTTTCAGCTTTTATTAATGCTTTAAATAATCA
GGATAATGGCAAGATTTTGGCTGAACCAAGTATTTCTCTCTTATCAGGAGAAACGGCAGATATTTTGGTTGGGGGCGAAT
TGCCTTTTGCTCAAAAAGATAAAGAGGGTAGCGCAACAATCATTTATAAAGAATTTGGAGTCAAGTTGATTGTGGGGGCA
AAGGTACAAAAAAATAAACGTATTCGCTTAGCACTAGACCAAAGTGTAAGTACGATTGCGGGAAGTTATGCTTATGATAA
TGTAGGTACTGTGCCTTATTTCAATACACGTCGTGCTAAATCGATTTTTGAAGTTGCAGATGGGGAAAGTTTTATTATTG
GAGGACTATTTAGTTCTCAGGATGCAGAAGGAATAAATAAAGTACCACTGCTAGGTGATATCCCAATATTAGGCTCATTT
TTCCGTAATGCAAGAACAGATCGAGAAGACAAAGAACTCGTGATTGTTGCGACGGTGAATGTGGTGAAACCAGTACATGA
AAGTGATATTGTGTATCCTACCTTTGAACAAACAGGGACTATGGAACGCTTTTTTAATCTGACACCGATTAAAAATGTAT
ACCATAAAACATTAAGCACTAATTTCTTAAGAAATGGAGGGTTCATCCAATGA

Upstream 100 bases:

>100_bases
TTGAGAAAGACTCTAAGTTAATTGTATTACCTTCAGTTGATGAGGCAGAAAGTTCAAATAACCGTGGTGTGTTTATTAGA
AAATTAAGAGGTAACAAATC

Downstream 100 bases:

>100_bases
GAAAGTTAGTCACTAGTATTGTGTTTGTTGTGTTGATGTATTCTGCACAAGGTGTAGCATTTTCTAAAAATGAATTAGTC
ACGAACACTAATGTAGCACA

Product: RcpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MNNKCITKKWLSVLLIGSGLIWSSLVYSKTFNLEQGGTKLVRTDEKIDTIFVSSPSVADYEILDDNSFIIYAKEEGRAEV
TAFGQDGKPLTTDFINVNPLISNINDISDTNRQIKARFPNSNLSVKKVGKAYVIEGKARTQEESEEAHRIVGEALGNSKK
VTETSFNRSEGVKEYIPFLDKYQFDGVINNASVADSTQINVKLSVVEVNKKLTEALGINWGRVVGVHSGPLLGGSVSLSG
GFSGSGGSTLNINATGVSAFINALNNQDNGKILAEPSISLLSGETADILVGGELPFAQKDKEGSATIIYKEFGVKLIVGA
KVQKNKRIRLALDQSVSTIAGSYAYDNVGTVPYFNTRRAKSIFEVADGESFIIGGLFSSQDAEGINKVPLLGDIPILGSF
FRNARTDREDKELVIVATVNVVKPVHESDIVYPTFEQTGTMERFFNLTPIKNVYHKTLSTNFLRNGGFIQ

Sequences:

>Translated_470_residues
MNNKCITKKWLSVLLIGSGLIWSSLVYSKTFNLEQGGTKLVRTDEKIDTIFVSSPSVADYEILDDNSFIIYAKEEGRAEV
TAFGQDGKPLTTDFINVNPLISNINDISDTNRQIKARFPNSNLSVKKVGKAYVIEGKARTQEESEEAHRIVGEALGNSKK
VTETSFNRSEGVKEYIPFLDKYQFDGVINNASVADSTQINVKLSVVEVNKKLTEALGINWGRVVGVHSGPLLGGSVSLSG
GFSGSGGSTLNINATGVSAFINALNNQDNGKILAEPSISLLSGETADILVGGELPFAQKDKEGSATIIYKEFGVKLIVGA
KVQKNKRIRLALDQSVSTIAGSYAYDNVGTVPYFNTRRAKSIFEVADGESFIIGGLFSSQDAEGINKVPLLGDIPILGSF
FRNARTDREDKELVIVATVNVVKPVHESDIVYPTFEQTGTMERFFNLTPIKNVYHKTLSTNFLRNGGFIQ
>Mature_470_residues
MNNKCITKKWLSVLLIGSGLIWSSLVYSKTFNLEQGGTKLVRTDEKIDTIFVSSPSVADYEILDDNSFIIYAKEEGRAEV
TAFGQDGKPLTTDFINVNPLISNINDISDTNRQIKARFPNSNLSVKKVGKAYVIEGKARTQEESEEAHRIVGEALGNSKK
VTETSFNRSEGVKEYIPFLDKYQFDGVINNASVADSTQINVKLSVVEVNKKLTEALGINWGRVVGVHSGPLLGGSVSLSG
GFSGSGGSTLNINATGVSAFINALNNQDNGKILAEPSISLLSGETADILVGGELPFAQKDKEGSATIIYKEFGVKLIVGA
KVQKNKRIRLALDQSVSTIAGSYAYDNVGTVPYFNTRRAKSIFEVADGESFIIGGLFSSQDAEGINKVPLLGDIPILGSF
FRNARTDREDKELVIVATVNVVKPVHESDIVYPTFEQTGTMERFFNLTPIKNVYHKTLSTNFLRNGGFIQ

Specific function: Involved in the secretion of an unknown compound (Potential) [H]

COG id: COG4964

COG function: function code U; Flp pilus assembly protein, secretin CpaC

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BON domain [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=231, Percent_Identity=28.5714285714286, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI87082242, Length=169, Percent_Identity=31.9526627218935, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR004846
- InterPro:   IPR007055 [H]

Pfam domain/function: PF04972 BON; PF00263 Secretin [H]

EC number: NA

Molecular weight: Translated: 51117; Mature: 51117

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKCITKKWLSVLLIGSGLIWSSLVYSKTFNLEQGGTKLVRTDEKIDTIFVSSPSVADY
CCCCCHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCEEEECCCCEEEEEECCCCCCCE
EILDDNSFIIYAKEEGRAEVTAFGQDGKPLTTDFINVNPLISNINDISDTNRQIKARFPN
EEECCCEEEEEECCCCCEEEEEECCCCCEEEEEEEECCHHHHCCHHCCCCCCEEEEECCC
SNLSVKKVGKAYVIEGKARTQEESEEAHRIVGEALGNSKKVTETSFNRSEGVKEYIPFLD
CCCCCEECCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHCCHHHHHHHHH
KYQFDGVINNASVADSTQINVKLSVVEVNKKLTEALGINWGRVVGVHSGPLLGGSVSLSG
CEECCCEECCCCCCCCEEEEEEEEEEECCHHHHHHHCCCCCEEEEECCCCCCCCEEEECC
GFSGSGGSTLNINATGVSAFINALNNQDNGKILAEPSISLLSGETADILVGGELPFAQKD
CCCCCCCCEEEEECCHHHHHHHHHCCCCCCEEEECCCEEEECCCCEEEEECCCCCCCCCC
KEGSATIIYKEFGVKLIVGAKVQKNKRIRLALDQSVSTIAGSYAYDNVGTVPYFNTRRAK
CCCCEEEEEEECCEEEEEECEECCCCEEEEEECCCHHHHHCCCEECCCCCCCCCCCHHHH
SIFEVADGESFIIGGLFSSQDAEGINKVPLLGDIPILGSFFRNARTDREDKELVIVATVN
HHHHHCCCCEEEEEEEECCCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCEEEEEEEE
VVKPVHESDIVYPTFEQTGTMERFFNLTPIKNVYHKTLSTNFLRNGGFIQ
EECCCCCCCCEEECHHCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNNKCITKKWLSVLLIGSGLIWSSLVYSKTFNLEQGGTKLVRTDEKIDTIFVSSPSVADY
CCCCCHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCEEEECCCCEEEEEECCCCCCCE
EILDDNSFIIYAKEEGRAEVTAFGQDGKPLTTDFINVNPLISNINDISDTNRQIKARFPN
EEECCCEEEEEECCCCCEEEEEECCCCCEEEEEEEECCHHHHCCHHCCCCCCEEEEECCC
SNLSVKKVGKAYVIEGKARTQEESEEAHRIVGEALGNSKKVTETSFNRSEGVKEYIPFLD
CCCCCEECCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHCCHHHHHHHHH
KYQFDGVINNASVADSTQINVKLSVVEVNKKLTEALGINWGRVVGVHSGPLLGGSVSLSG
CEECCCEECCCCCCCCEEEEEEEEEEECCHHHHHHHCCCCCEEEEECCCCCCCCEEEECC
GFSGSGGSTLNINATGVSAFINALNNQDNGKILAEPSISLLSGETADILVGGELPFAQKD
CCCCCCCCEEEEECCHHHHHHHHHCCCCCCEEEECCCEEEECCCCEEEEECCCCCCCCCC
KEGSATIIYKEFGVKLIVGAKVQKNKRIRLALDQSVSTIAGSYAYDNVGTVPYFNTRRAK
CCCCEEEEEEECCEEEEEECEECCCCEEEEEECCCHHHHHCCCEECCCCCCCCCCCHHHH
SIFEVADGESFIIGGLFSSQDAEGINKVPLLGDIPILGSFFRNARTDREDKELVIVATVN
HHHHHCCCCEEEEEEEECCCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCEEEEEEEE
VVKPVHESDIVYPTFEQTGTMERFFNLTPIKNVYHKTLSTNFLRNGGFIQ
EECCCCCCCCEEECHHCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]