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The map label for this gene is yciM [C]

Identifier: 15602663

GI number: 15602663

Start: 941984

End: 943171

Strand: Reverse

Name: yciM [C]

Synonym: PM0798

Alternate gene names: 15602663

Gene position: 943171-941984 (Counterclockwise)

Preceding gene: 15602664

Following gene: 15602662

Centisome position: 41.78

GC content: 38.05

Gene sequence:

>1188_bases
ATGCTCGAGTTACTCTTCCTGCTTTTACCTATTGCTGCAGCTTATGGTTGGTATATGGGGCACCGTAGTGCGAAAAAAGA
TCAGGAAGACATGACAAACAAACTCTCCCGTGATTATGTCACTGGCGTGAATTTCCTTTTATCAAATCAACCAGAAAAAG
CAGTTGATTTGTTTCTCGATATTCTGCAAAAGCAAGAAACAGAAAATGAAATCGATAGCACTTCACAGTTTGAAGCTGAA
CTGACACTAGGCAATCTTTATCGCTCTCGAGGTGAAGTTGATCGCGCTTTACGTATTCATCAAGCGTTAGATCGTAGCCC
TGATTATACCTTTGAACAAAAACTGCTGGCTAAGCAACAATTAGCAAAAGATTTCATGGCCGTAGGATTTTATGATCGTG
CTGAAATGCTTTATATTTTGTTAGTTGATGAGCCAGAGTTTGCTGAAAATGCATTACAACAACTGGCAGTGTTGTATCAA
AAAACGAAAGAATGGGAAAAAGCGATTAATGTTGCAGAAAAATTAGCGAAAATTTCACCACAAGAAAATAATATTGAGCT
TGCACAATATTACTGTGAATTGGCTCAAAGTTTATCGTTAGAAGAGAAGACACAACAAGAGCGTCAGAAAGGATTATTAG
TGTCAGCATTAAAAGTGGCACCAAATTGTGTGAGAGCCTCAATTTTACTTGGTCAACTTTTAATCCAAGAAAAACGTTAC
CAGCAGGCTGTAATGACGTTAGAGAATGTCCTTGAACAAAACGCTGATTATGTGGGAGAAGTCTTAGATTTACTGAAAGC
CTGTTATCACAAGCTCAACCAATTAGAGAGCTTTGAATTATTTTTGATTAAAGCCAGCCGTGTCACCAAAAATAGTGCCG
TAGAATTAGCACTTTCTGATTTAATTGAAGAAATCGACGGTAAAACAGCCGCACAAGCGAAGTTGTATCAGCAATTAAAC
CAACATCCGACAACCTTTTTATTTCACCGCTTTATTCAATATCAAATTAATGATGCTGAAGAAGGGAGAGGAAAAGAAAG
TCTTGTGTTGTTGCATAAAATGGTGGGGGAACGCATTAAGCAGAATTTTGACTACCGTTGCACAAATTGTGGTTATCAAA
CACACAAACTAACCTGGTGTTGTCCATCTTGCCGACATTGGGAAACAATCAAACCGATAGAAGATTAA

Upstream 100 bases:

>100_bases
TCAAATTAAAGCTGAAAAACATGTCCTTAACACGTCAGCTTAAACGCCAAACGTTACAAATTAATGAATTAACAACGACT
CGAGATAAGGTCGCTAAATA

Downstream 100 bases:

>100_bases
GCAAACATAATTAATTGAACACAGAGAGGGAAAATTATGACGAGTAAAATCATTGTTGCACTAGATTATGAAAAAGAAGA
AGAGGCATTGTGTTTAGTTG

Product: tetratricopeptide repeat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MLELLFLLLPIAAAYGWYMGHRSAKKDQEDMTNKLSRDYVTGVNFLLSNQPEKAVDLFLDILQKQETENEIDSTSQFEAE
LTLGNLYRSRGEVDRALRIHQALDRSPDYTFEQKLLAKQQLAKDFMAVGFYDRAEMLYILLVDEPEFAENALQQLAVLYQ
KTKEWEKAINVAEKLAKISPQENNIELAQYYCELAQSLSLEEKTQQERQKGLLVSALKVAPNCVRASILLGQLLIQEKRY
QQAVMTLENVLEQNADYVGEVLDLLKACYHKLNQLESFELFLIKASRVTKNSAVELALSDLIEEIDGKTAAQAKLYQQLN
QHPTTFLFHRFIQYQINDAEEGRGKESLVLLHKMVGERIKQNFDYRCTNCGYQTHKLTWCCPSCRHWETIKPIED

Sequences:

>Translated_395_residues
MLELLFLLLPIAAAYGWYMGHRSAKKDQEDMTNKLSRDYVTGVNFLLSNQPEKAVDLFLDILQKQETENEIDSTSQFEAE
LTLGNLYRSRGEVDRALRIHQALDRSPDYTFEQKLLAKQQLAKDFMAVGFYDRAEMLYILLVDEPEFAENALQQLAVLYQ
KTKEWEKAINVAEKLAKISPQENNIELAQYYCELAQSLSLEEKTQQERQKGLLVSALKVAPNCVRASILLGQLLIQEKRY
QQAVMTLENVLEQNADYVGEVLDLLKACYHKLNQLESFELFLIKASRVTKNSAVELALSDLIEEIDGKTAAQAKLYQQLN
QHPTTFLFHRFIQYQINDAEEGRGKESLVLLHKMVGERIKQNFDYRCTNCGYQTHKLTWCCPSCRHWETIKPIED
>Mature_395_residues
MLELLFLLLPIAAAYGWYMGHRSAKKDQEDMTNKLSRDYVTGVNFLLSNQPEKAVDLFLDILQKQETENEIDSTSQFEAE
LTLGNLYRSRGEVDRALRIHQALDRSPDYTFEQKLLAKQQLAKDFMAVGFYDRAEMLYILLVDEPEFAENALQQLAVLYQ
KTKEWEKAINVAEKLAKISPQENNIELAQYYCELAQSLSLEEKTQQERQKGLLVSALKVAPNCVRASILLGQLLIQEKRY
QQAVMTLENVLEQNADYVGEVLDLLKACYHKLNQLESFELFLIKASRVTKNSAVELALSDLIEEIDGKTAAQAKLYQQLN
QHPTTFLFHRFIQYQINDAEEGRGKESLVLLHKMVGERIKQNFDYRCTNCGYQTHKLTWCCPSCRHWETIKPIED

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=385, Percent_Identity=48.5714285714286, Blast_Score=385, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45605; Mature: 45605

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELLFLLLPIAAAYGWYMGHRSAKKDQEDMTNKLSRDYVTGVNFLLSNQPEKAVDLFLD
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ILQKQETENEIDSTSQFEAELTLGNLYRSRGEVDRALRIHQALDRSPDYTFEQKLLAKQQ
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LAKDFMAVGFYDRAEMLYILLVDEPEFAENALQQLAVLYQKTKEWEKAINVAEKLAKISP
HHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QENNIELAQYYCELAQSLSLEEKTQQERQKGLLVSALKVAPNCVRASILLGQLLIQEKRY
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
QQAVMTLENVLEQNADYVGEVLDLLKACYHKLNQLESFELFLIKASRVTKNSAVELALSD
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEHHHHCCHHHHHHHHHH
LIEEIDGKTAAQAKLYQQLNQHPTTFLFHRFIQYQINDAEEGRGKESLVLLHKMVGERIK
HHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
QNFDYRCTNCGYQTHKLTWCCPSCRHWETIKPIED
HCCCCEECCCCCCCCEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MLELLFLLLPIAAAYGWYMGHRSAKKDQEDMTNKLSRDYVTGVNFLLSNQPEKAVDLFLD
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ILQKQETENEIDSTSQFEAELTLGNLYRSRGEVDRALRIHQALDRSPDYTFEQKLLAKQQ
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LAKDFMAVGFYDRAEMLYILLVDEPEFAENALQQLAVLYQKTKEWEKAINVAEKLAKISP
HHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QENNIELAQYYCELAQSLSLEEKTQQERQKGLLVSALKVAPNCVRASILLGQLLIQEKRY
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
QQAVMTLENVLEQNADYVGEVLDLLKACYHKLNQLESFELFLIKASRVTKNSAVELALSD
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEHHHHCCHHHHHHHHHH
LIEEIDGKTAAQAKLYQQLNQHPTTFLFHRFIQYQINDAEEGRGKESLVLLHKMVGERIK
HHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
QNFDYRCTNCGYQTHKLTWCCPSCRHWETIKPIED
HCCCCEECCCCCCCCEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]