| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is gpmB [H]
Identifier: 15602499
GI number: 15602499
Start: 736029
End: 736679
Strand: Direct
Name: gpmB [H]
Synonym: PM0634
Alternate gene names: 15602499
Gene position: 736029-736679 (Clockwise)
Preceding gene: 15602491
Following gene: 15602503
Centisome position: 32.6
GC content: 42.24
Gene sequence:
>651_bases ATGAAAACATTAACATTCTATTTGATACGTCATGGTAAAACGGAGTGGAACGAAAAAAGGTTATTACAAGGAAATGGGGA CTCCCCTTTGACACAAGAAGGCATTGAAGGTGCTAAGCGCACAGCAAAAGCGTTATCTAACATTGATTTCACTGCCGCCT ATAGTAGCGTATTGCCCCGTGCAATTTCCACTGCAAACATGATTTTAGCGCACAAAACCACCCCATTAATTTGTCATGCC GGCTTAAATGAATTGTGTTTTGGCTCATGGGAAGGGCAAGCCATTGAGGAATTAAGTTGCTTACCGGAATACCGTCAAAT GCGCGATCAACCTGCGCAGTATTTGGGGTTAACCAATGGCGGGGAAACTTATCAGCAATTAGCAACACGCGCGATCGGCG TCATTGAACAGATTATTCAACGTTATGACACTGGAAATATTCTCATTGTCTCTCATGGTCATACTTTACGTATGCTTTTG GCGTTGTTTCATGGTGCCACTTGGCAAACCCATCGAGAAAAAAGTACCAGCTTAGCGAACACGTCCATTAGCGTTGTACA CTATTTACAAACTGAGAATGAAACAGGACGCTTTGTGCTTGAAAAGGTCAATGATATACAGCATTTAACCGATTCATTCG ATGAGGAATAA
Upstream 100 bases:
>100_bases TCAATCAATCATAAAGGGAAAACATTATACCATACTTGGCTCCCCTCCATTATCAGGATTTTTTCGCTATAATGGATTGC AGATATAAATGAGGAACAAC
Downstream 100 bases:
>100_bases AGGCAGAAGTCTATTCTGCCTTATTGAGTATTAAAGTAACTGTAAGAATTCGCCAACAGTATGGAAAGAGCCAAAGACTA AGATTACATCATGCGCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: PGAM; Phosphoglyceromutase [H]
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MKTLTFYLIRHGKTEWNEKRLLQGNGDSPLTQEGIEGAKRTAKALSNIDFTAAYSSVLPRAISTANMILAHKTTPLICHA GLNELCFGSWEGQAIEELSCLPEYRQMRDQPAQYLGLTNGGETYQQLATRAIGVIEQIIQRYDTGNILIVSHGHTLRMLL ALFHGATWQTHREKSTSLANTSISVVHYLQTENETGRFVLEKVNDIQHLTDSFDEE
Sequences:
>Translated_216_residues MKTLTFYLIRHGKTEWNEKRLLQGNGDSPLTQEGIEGAKRTAKALSNIDFTAAYSSVLPRAISTANMILAHKTTPLICHA GLNELCFGSWEGQAIEELSCLPEYRQMRDQPAQYLGLTNGGETYQQLATRAIGVIEQIIQRYDTGNILIVSHGHTLRMLL ALFHGATWQTHREKSTSLANTSISVVHYLQTENETGRFVLEKVNDIQHLTDSFDEE >Mature_216_residues MKTLTFYLIRHGKTEWNEKRLLQGNGDSPLTQEGIEGAKRTAKALSNIDFTAAYSSVLPRAISTANMILAHKTTPLICHA GLNELCFGSWEGQAIEELSCLPEYRQMRDQPAQYLGLTNGGETYQQLATRAIGVIEQIIQRYDTGNILIVSHGHTLRMLL ALFHGATWQTHREKSTSLANTSISVVHYLQTENETGRFVLEKVNDIQHLTDSFDEE
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790856, Length=214, Percent_Identity=32.2429906542056, Blast_Score=86, Evalue=1e-18, Organism=Escherichia coli, GI1786857, Length=170, Percent_Identity=30.5882352941176, Blast_Score=75, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6324857, Length=216, Percent_Identity=28.7037037037037, Blast_Score=83, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR023086 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 24233; Mature: 24233
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLTFYLIRHGKTEWNEKRLLQGNGDSPLTQEGIEGAKRTAKALSNIDFTAAYSSVLPR CCCEEEEEEECCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AISTANMILAHKTTPLICHAGLNELCFGSWEGQAIEELSCLPEYRQMRDQPAQYLGLTNG HHHHHHHHEEECCCCEEEECCCHHHHCCCCCCHHHHHHHCCHHHHHHHCCHHHHCCCCCC GETYQQLATRAIGVIEQIIQRYDTGNILIVSHGHTLRMLLALFHGATWQTHREKSTSLAN CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHC TSISVVHYLQTENETGRFVLEKVNDIQHLTDSFDEE CHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKTLTFYLIRHGKTEWNEKRLLQGNGDSPLTQEGIEGAKRTAKALSNIDFTAAYSSVLPR CCCEEEEEEECCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AISTANMILAHKTTPLICHAGLNELCFGSWEGQAIEELSCLPEYRQMRDQPAQYLGLTNG HHHHHHHHEEECCCCEEEECCCHHHHCCCCCCHHHHHHHCCHHHHHHHCCHHHHCCCCCC GETYQQLATRAIGVIEQIIQRYDTGNILIVSHGHTLRMLLALFHGATWQTHREKSTSLAN CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHC TSISVVHYLQTENETGRFVLEKVNDIQHLTDSFDEE CHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA