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The map label for this gene is sohB [H]

Identifier: 15602450

GI number: 15602450

Start: 674049

End: 675110

Strand: Direct

Name: sohB [H]

Synonym: PM0585

Alternate gene names: 15602450

Gene position: 674049-675110 (Clockwise)

Preceding gene: 15602447

Following gene: 15602451

Centisome position: 29.86

GC content: 40.02

Gene sequence:

>1062_bases
ATGTGGTCTGATATTGCAACAGGATATGGGCTTTTTATTTTAGAAATCTTAACAATTTTATTGGTCATTGCAGGCATCGC
TTTTATGATTGTGACATTAAAGCAACATAAAGCAAAAAGTACGGGCGAACTTGTGGTGGTGGATTTATCAGAGGAATACC
AAGAAAACAGCAAAAGATTACGTGAGTTTAGTTTATCGGAAGAAACACGTAAGCAATTAGAGAAAACCCAAAAAAAAGCA
GATAAAGAAAAAGCGAAACGTGAAAAAGAAAAGCGTAAAAAAGGTGAAGACATCGCAGACGAGCATAAACCGCGCCTTTA
TGTCTTACAGTTTAAAGGCGATATTGCGGCGTCAGCGACGAGCGCATTACGTGAAGAAGTGAGTACCATTATTGGAGTTG
CCAAGCCAGAAGATGAGGTTTTAGTACGCTTAGAAAGTCCCGGTGGAATGGTACATGGTTATGGGTTAGCGGCGTCGCAG
TTGCTACGTTTAAAACAGCATGGCATTAAATTAACGGTTGCGGTAGATAAAGTGGCAGCCAGTGGGGGATATATGATGGC
TTGTGTGGCGGATACTATTGTTGCCGCGCCGTTTGCGATTTTGGGATCAGTCGGTGTGGTTGCACAAATTCCTAACATTC
ATCGTTTGTTAAAAAAACATGATGTGGATGTCGATGTGATGACGGCGGGTGAATATAAACGCACGATGACTGTGTTAGGC
GAAAATACAGAAAAAGGAAAACAGAAATTCCAGCAAGAATTAGAAGAAACGCATCAATTATTCAAACAATTTGTGACCCA
AAACCGTCCGCAAGTCAATATTGAGGAAATTGCCACGGGGGAACACTGGTTTGGTCAACAAGCGTTAGGATTGCATTTAG
TGGATGCAATTTCAACAAGTGATGATTTAATTCTAAACGCGATCAAAGAAAATAAAACCGTTTTATCCGTGAAATATCAT
GTAAAACAATCGTTCCTTCAAAAAGTCGGTAAACAGGCAGAAGAAAGTACAGATGCCTTTTTATTACGTTGGCTGAGACG
AAATAACAGTACATTACTTTAG

Upstream 100 bases:

>100_bases
AGAAAGGCGTGAATAAAATATTAGCGCTCAGAGGAGAGTAAGTTGCACTTTCACTTAAATTCGTTATGATTAACCATCAT
TTATTTTAAGGAGAAAAAAC

Downstream 100 bases:

>100_bases
CTGAAGCAACTTTACAGTAGTTGACTAAAAGTTTCGAAATATTAAGTATTTGTTGATTTACTTTATGAACAATAGGGCTT
ACTATATTGAGCTGAATTTT

Product: putative periplasmic protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MWSDIATGYGLFILEILTILLVIAGIAFMIVTLKQHKAKSTGELVVVDLSEEYQENSKRLREFSLSEETRKQLEKTQKKA
DKEKAKREKEKRKKGEDIADEHKPRLYVLQFKGDIAASATSALREEVSTIIGVAKPEDEVLVRLESPGGMVHGYGLAASQ
LLRLKQHGIKLTVAVDKVAASGGYMMACVADTIVAAPFAILGSVGVVAQIPNIHRLLKKHDVDVDVMTAGEYKRTMTVLG
ENTEKGKQKFQQELEETHQLFKQFVTQNRPQVNIEEIATGEHWFGQQALGLHLVDAISTSDDLILNAIKENKTVLSVKYH
VKQSFLQKVGKQAEESTDAFLLRWLRRNNSTLL

Sequences:

>Translated_353_residues
MWSDIATGYGLFILEILTILLVIAGIAFMIVTLKQHKAKSTGELVVVDLSEEYQENSKRLREFSLSEETRKQLEKTQKKA
DKEKAKREKEKRKKGEDIADEHKPRLYVLQFKGDIAASATSALREEVSTIIGVAKPEDEVLVRLESPGGMVHGYGLAASQ
LLRLKQHGIKLTVAVDKVAASGGYMMACVADTIVAAPFAILGSVGVVAQIPNIHRLLKKHDVDVDVMTAGEYKRTMTVLG
ENTEKGKQKFQQELEETHQLFKQFVTQNRPQVNIEEIATGEHWFGQQALGLHLVDAISTSDDLILNAIKENKTVLSVKYH
VKQSFLQKVGKQAEESTDAFLLRWLRRNNSTLL
>Mature_353_residues
MWSDIATGYGLFILEILTILLVIAGIAFMIVTLKQHKAKSTGELVVVDLSEEYQENSKRLREFSLSEETRKQLEKTQKKA
DKEKAKREKEKRKKGEDIADEHKPRLYVLQFKGDIAASATSALREEVSTIIGVAKPEDEVLVRLESPGGMVHGYGLAASQ
LLRLKQHGIKLTVAVDKVAASGGYMMACVADTIVAAPFAILGSVGVVAQIPNIHRLLKKHDVDVDVMTAGEYKRTMTVLG
ENTEKGKQKFQQELEETHQLFKQFVTQNRPQVNIEEIATGEHWFGQQALGLHLVDAISTSDDLILNAIKENKTVLSVKYH
VKQSFLQKVGKQAEESTDAFLLRWLRRNNSTLL

Specific function: Possible protease [H]

COG id: COG0616

COG function: function code OU; Periplasmic serine proteases (ClpP class)

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S49 family [H]

Homologues:

Organism=Escherichia coli, GI1787527, Length=350, Percent_Identity=52.5714285714286, Blast_Score=339, Evalue=2e-94,
Organism=Escherichia coli, GI1788064, Length=207, Percent_Identity=27.0531400966184, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002142
- InterPro:   IPR013703 [H]

Pfam domain/function: PF01343 Peptidase_S49; PF08496 Peptidase_S49_N [H]

EC number: 3.4.21.-

Molecular weight: Translated: 39434; Mature: 39434

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSDIATGYGLFILEILTILLVIAGIAFMIVTLKQHKAKSTGELVVVDLSEEYQENSKRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHH
REFSLSEETRKQLEKTQKKADKEKAKREKEKRKKGEDIADEHKPRLYVLQFKGDIAASAT
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEEEEECCCHHHHHH
SALREEVSTIIGVAKPEDEVLVRLESPGGMVHGYGLAASQLLRLKQHGIKLTVAVDKVAA
HHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECHHHHHHHHHHHHCCEEEEEEEEHHHC
SGGYMMACVADTIVAAPFAILGSVGVVAQIPNIHRLLKKHDVDVDVMTAGEYKRTMTVLG
CCCEEHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHCCCCEEEEECCCHHHHHHHHC
ENTEKGKQKFQQELEETHQLFKQFVTQNRPQVNIEEIATGEHWFGQQALGLHLVDAISTS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHCCCHHHHHHHHHHHCCC
DDLILNAIKENKTVLSVKYHVKQSFLQKVGKQAEESTDAFLLRWLRRNNSTLL
CHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MWSDIATGYGLFILEILTILLVIAGIAFMIVTLKQHKAKSTGELVVVDLSEEYQENSKRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHH
REFSLSEETRKQLEKTQKKADKEKAKREKEKRKKGEDIADEHKPRLYVLQFKGDIAASAT
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEEEEECCCHHHHHH
SALREEVSTIIGVAKPEDEVLVRLESPGGMVHGYGLAASQLLRLKQHGIKLTVAVDKVAA
HHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECHHHHHHHHHHHHCCEEEEEEEEHHHC
SGGYMMACVADTIVAAPFAILGSVGVVAQIPNIHRLLKKHDVDVDVMTAGEYKRTMTVLG
CCCEEHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHCCCCEEEEECCCHHHHHHHHC
ENTEKGKQKFQQELEETHQLFKQFVTQNRPQVNIEEIATGEHWFGQQALGLHLVDAISTS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHCCCHHHHHHHHHHHCCC
DDLILNAIKENKTVLSVKYHVKQSFLQKVGKQAEESTDAFLLRWLRRNNSTLL
CHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]