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The map label for this gene is kpsF [C]

Identifier: 15602390

GI number: 15602390

Start: 599813

End: 600853

Strand: Reverse

Name: kpsF [C]

Synonym: PM0525

Alternate gene names: 15602390

Gene position: 600853-599813 (Counterclockwise)

Preceding gene: 15602391

Following gene: 15602389

Centisome position: 26.62

GC content: 41.59

Gene sequence:

>1041_bases
TTGATACAAAACATTCTCTTACTCCAAATAAATGGAAAACTCAAAATCAAACGAAAATCTTATGTTATAATTCCCCCAGT
TTTTATGTCGATAAAGGACTCAGAAATGAATTATTTGCAAATCGCACGTGAAACATTAGCGGTCGAAGAACAAGCACTGG
CACGTTTAGGTCAGCGGCTTGATACCCACTTTAACGAAATCGTTGAGTTAATTTTACAGTGCCAAGGACGCTTAGTGATC
GGCGGGATCGGGAAATCGGGGTTAGTGGGGAAAAAAATGGTCGCCACTTTTGCTTCTACTGGAACACCAAGTTTTTTCCT
ACACCCGACAGAAGCCTTCCACGGTGACTTAGGTATGCTCAAACCAATTGATATTGTCATGTTGATTTCTTATAGCGGTG
AAACAGATGATGTCAATAAACTCATTCCTAGTCTCAAAAATTTTGGCAATAAAATCATCGCCCTTACAGGAAACCCAAAT
TCAACCCTCGCCAAACATTCTGATTATGTCCTAGATATCAGTGTTGAACGTGAAGTCTGCCCTAATAATCTTGCCCCTAC
GACCTCTGTGCTGGTCACAATGGCATTAGGCGATGCCTTAGCAGTTGCCTTAATTAAAGCGCGTGATTTTAAACCAGCTG
ACTTCGCACGCTTCCATCCAGGCGGTAGTCTTGGACGGCGTCTATTATGTCGCGTCAAAGATGAAATGCAGACACGTCTG
CCTGTCACACGCTTAGAGACCTCTTTTACAGACTGTCTGAGTATTATGAATGAAGGACGAATGGGGGTTGCTTTAGTAAT
GGAACAAAATCAATTAAAAGGGATCATCACTGATGGGGATATTCGTCGCGCGCTTACGGCTAATGGTGCAGAAACCTTAC
GTAAAACAGCACAAGATTTAATGACATCGAACCCTAAAACTATTCATCAAGATGCCTATTTAGCTGAAGCTGAAGCCTTT
ATGAAAGAGAAGAAAATCCACTCTTTAGTGGTGATTAATGATCAACAAAATGTGGTTGGCCTAGTGGAGTTTACAAGCTA
A

Upstream 100 bases:

>100_bases
TTGTCTGACCAACTCAGGCGCGCAGTATAACGTAATTCTCCCCCAAAAGACAGAACTTATTTGAAACGCCACAAAAATCT
ACCGCACTTTTGAGCTTTTC

Downstream 100 bases:

>100_bases
TGTTAACGGAAAAACTCAAAAAAATTAAATTTGTGATTACAGATATCGACGGTGTACTGACCGACGGCTCTTTGCATTAC
GATGCCCATGGTGAAGCTTT

Product: KpsF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MIQNILLLQINGKLKIKRKSYVIIPPVFMSIKDSEMNYLQIARETLAVEEQALARLGQRLDTHFNEIVELILQCQGRLVI
GGIGKSGLVGKKMVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIALTGNPN
STLAKHSDYVLDISVEREVCPNNLAPTTSVLVTMALGDALAVALIKARDFKPADFARFHPGGSLGRRLLCRVKDEMQTRL
PVTRLETSFTDCLSIMNEGRMGVALVMEQNQLKGIITDGDIRRALTANGAETLRKTAQDLMTSNPKTIHQDAYLAEAEAF
MKEKKIHSLVVINDQQNVVGLVEFTS

Sequences:

>Translated_346_residues
MIQNILLLQINGKLKIKRKSYVIIPPVFMSIKDSEMNYLQIARETLAVEEQALARLGQRLDTHFNEIVELILQCQGRLVI
GGIGKSGLVGKKMVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIALTGNPN
STLAKHSDYVLDISVEREVCPNNLAPTTSVLVTMALGDALAVALIKARDFKPADFARFHPGGSLGRRLLCRVKDEMQTRL
PVTRLETSFTDCLSIMNEGRMGVALVMEQNQLKGIITDGDIRRALTANGAETLRKTAQDLMTSNPKTIHQDAYLAEAEAF
MKEKKIHSLVVINDQQNVVGLVEFTS
>Mature_346_residues
MIQNILLLQINGKLKIKRKSYVIIPPVFMSIKDSEMNYLQIARETLAVEEQALARLGQRLDTHFNEIVELILQCQGRLVI
GGIGKSGLVGKKMVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIALTGNPN
STLAKHSDYVLDISVEREVCPNNLAPTTSVLVTMALGDALAVALIKARDFKPADFARFHPGGSLGRRLLCRVKDEMQTRL
PVTRLETSFTDCLSIMNEGRMGVALVMEQNQLKGIITDGDIRRALTANGAETLRKTAQDLMTSNPKTIHQDAYLAEAEAF
MKEKKIHSLVVINDQQNVVGLVEFTS

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=328, Percent_Identity=40.8536585365854, Blast_Score=248, Evalue=6e-67,
Organism=Escherichia coli, GI87082151, Length=309, Percent_Identity=41.4239482200647, Blast_Score=244, Evalue=6e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 38093; Mature: 38093

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQNILLLQINGKLKIKRKSYVIIPPVFMSIKDSEMNYLQIARETLAVEEQALARLGQRL
CCCCEEEEEECCEEEEEECCEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
DTHFNEIVELILQCQGRLVIGGIGKSGLVGKKMVATFASTGTPSFFLHPTEAFHGDLGML
HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEECCCHHHCCCCCCC
KPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIALTGNPNSTLAKHSDYVLDISVEREVC
CCEEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHCCCCEEEEEEECCCCC
PNNLAPTTSVLVTMALGDALAVALIKARDFKPADFARFHPGGSLGRRLLCRVKDEMQTRL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCC
PVTRLETSFTDCLSIMNEGRMGVALVMEQNQLKGIITDGDIRRALTANGAETLRKTAQDL
CHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCHHHHHHHCCCHHHHHHHHHHH
MTSNPKTIHQDAYLAEAEAFMKEKKIHSLVVINDQQNVVGLVEFTS
HCCCCCEEHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECC
>Mature Secondary Structure
MIQNILLLQINGKLKIKRKSYVIIPPVFMSIKDSEMNYLQIARETLAVEEQALARLGQRL
CCCCEEEEEECCEEEEEECCEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
DTHFNEIVELILQCQGRLVIGGIGKSGLVGKKMVATFASTGTPSFFLHPTEAFHGDLGML
HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEECCCHHHCCCCCCC
KPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIALTGNPNSTLAKHSDYVLDISVEREVC
CCEEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHCCCCEEEEEEECCCCC
PNNLAPTTSVLVTMALGDALAVALIKARDFKPADFARFHPGGSLGRRLLCRVKDEMQTRL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCC
PVTRLETSFTDCLSIMNEGRMGVALVMEQNQLKGIITDGDIRRALTANGAETLRKTAQDL
CHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCHHHHHHHCCCHHHHHHHHHHH
MTSNPKTIHQDAYLAEAEAFMKEKKIHSLVVINDQQNVVGLVEFTS
HCCCCCEEHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]