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The map label for this gene is yrbI [C]

Identifier: 15602389

GI number: 15602389

Start: 599268

End: 599813

Strand: Reverse

Name: yrbI [C]

Synonym: PM0524

Alternate gene names: 15602389

Gene position: 599813-599268 (Counterclockwise)

Preceding gene: 15602390

Following gene: 15602371

Centisome position: 26.57

GC content: 44.14

Gene sequence:

>546_bases
ATGTTAACGGAAAAACTCAAAAAAATTAAATTTGTGATTACAGATATCGACGGTGTACTGACCGACGGCTCTTTGCATTA
CGATGCCCATGGTGAAGCTTTCAAAACCTTTCATGTTCGTGATGGCTTGGGGATCAGAATGTTAATGGAATCTGGCATTC
AAGTCGCGGTACTCTCGGGGCGAGATTCCCCGATTCTACGCAAACGTATTGCAGATCTAGGCATCCAACACTTTTTCCTC
GGCAAATTGGAAAAAGAAAGCGCCTGTCTTGAATTGATACAACAAGCCAATGTCTGTGCGCAAGAAACGGCTTATATTGG
TGATGACAGCGTTGATCTGCCTGCTTTTGCCGTCTGTGGTGTTGCCTTTGCAGTACAAGATGCGCCGGCTTATATCAAAA
TGCACGCTGATCACGTACTAATCCTGAAAGGTGGACAAGGGGCCTTTCGTGAAATGTCGGATATGATTTTAGCGGCACAG
AATAAAAGTGACATCTACACGAGTGCGCAAGGCTTCTTAAAAGCCGCAAAAAAAATGACACAATAA

Upstream 100 bases:

>100_bases
TAGCTGAAGCTGAAGCCTTTATGAAAGAGAAGAAAATCCACTCTTTAGTGGTGATTAATGATCAACAAAATGTGGTTGGC
CTAGTGGAGTTTACAAGCTA

Downstream 100 bases:

>100_bases
ACCGTCCGCAACAAAAAAACACGCGTAAAAGCGTGTTTTTTTATGAAGAAAGAAAACCTCTTTTATTTAATAATTCTTAA
ATGAGAAGTCGCTTTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: KDO 8-P phosphatase [H]

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MLTEKLKKIKFVITDIDGVLTDGSLHYDAHGEAFKTFHVRDGLGIRMLMESGIQVAVLSGRDSPILRKRIADLGIQHFFL
GKLEKESACLELIQQANVCAQETAYIGDDSVDLPAFAVCGVAFAVQDAPAYIKMHADHVLILKGGQGAFREMSDMILAAQ
NKSDIYTSAQGFLKAAKKMTQ

Sequences:

>Translated_181_residues
MLTEKLKKIKFVITDIDGVLTDGSLHYDAHGEAFKTFHVRDGLGIRMLMESGIQVAVLSGRDSPILRKRIADLGIQHFFL
GKLEKESACLELIQQANVCAQETAYIGDDSVDLPAFAVCGVAFAVQDAPAYIKMHADHVLILKGGQGAFREMSDMILAAQ
NKSDIYTSAQGFLKAAKKMTQ
>Mature_181_residues
MLTEKLKKIKFVITDIDGVLTDGSLHYDAHGEAFKTFHVRDGLGIRMLMESGIQVAVLSGRDSPILRKRIADLGIQHFFL
GKLEKESACLELIQQANVCAQETAYIGDDSVDLPAFAVCGVAFAVQDAPAYIKMHADHVLILKGGQGAFREMSDMILAAQ
NKSDIYTSAQGFLKAAKKMTQ

Specific function: Catalyzes the hydrolysis of KDO 8-P to KDO and inorganic phosphate [H]

COG id: COG1778

COG function: function code R; Low specificity phosphatase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdsC family [H]

Homologues:

Organism=Homo sapiens, GI8923900, Length=154, Percent_Identity=27.9220779220779, Blast_Score=71, Evalue=4e-13,
Organism=Escherichia coli, GI2367202, Length=160, Percent_Identity=40, Blast_Score=130, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006549
- InterPro:   IPR010023 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: =3.1.3.45 [H]

Molecular weight: Translated: 19774; Mature: 19774

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTEKLKKIKFVITDIDGVLTDGSLHYDAHGEAFKTFHVRDGLGIRMLMESGIQVAVLSG
CCHHHHHHHEEEEECCCCEEECCEEEECCCCCEEEEEEECCCCCHHHHHHCCCEEEEECC
RDSPILRKRIADLGIQHFFLGKLEKESACLELIQQANVCAQETAYIGDDSVDLPAFAVCG
CCCHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHEECCCCCCCCHHHHHHH
VAFAVQDAPAYIKMHADHVLILKGGQGAFREMSDMILAAQNKSDIYTSAQGFLKAAKKMT
HHHHHCCCCEEEEEECCEEEEEECCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHC
Q
C
>Mature Secondary Structure
MLTEKLKKIKFVITDIDGVLTDGSLHYDAHGEAFKTFHVRDGLGIRMLMESGIQVAVLSG
CCHHHHHHHEEEEECCCCEEECCEEEECCCCCEEEEEEECCCCCHHHHHHCCCEEEEECC
RDSPILRKRIADLGIQHFFLGKLEKESACLELIQQANVCAQETAYIGDDSVDLPAFAVCG
CCCHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHEECCCCCCCCHHHHHHH
VAFAVQDAPAYIKMHADHVLILKGGQGAFREMSDMILAAQNKSDIYTSAQGFLKAAKKMT
HHHHHCCCCEEEEEECCEEEEEECCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 12639950; 11835514 [H]