| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is ycbG [C]
Identifier: 15602347
GI number: 15602347
Start: 564347
End: 564793
Strand: Reverse
Name: ycbG [C]
Synonym: PM0482
Alternate gene names: 15602347
Gene position: 564793-564347 (Counterclockwise)
Preceding gene: 15602350
Following gene: 15602342
Centisome position: 25.02
GC content: 38.03
Gene sequence:
>447_bases ATGAAATATCAAAAACTTGAGAATCAAGAAGCGCATTGGAAATGGTTGTATTTAATCAAAAAGCACCGTGAAGGTGAAAA CATTACGCGCTATGAAGAACGCAGTTTAAGTGAAGACAAGGTAAAACAACTCCTCTCTCAGCAAAATCAGCCCCAAGCAA TTGAGAACTGGATCAAAGCCCACCTATCGCCTCACTTGATGATCAAACTTGATCAAGCGATTCGTGCACGTCGTAAACGT TTCTTTAATGGTGAAAAACAATCCACCAAGAAAAAATCCATTGACTTAGAATATGCTGTCTGGCTTAGACTTTCACGTTA TTCACGTAAAATGAAAATGACGCTTTCTGAAACCATTACTTACATGATCGATGAACGAGAAAGTAAAGCCCAATATGAAC ACCAAATTTCTGCCATGAAAGCAGGGCTCAAAGACTTATTAAAATGA
Upstream 100 bases:
>100_bases ACATTTCCCTGAATAGTAAAAATCTGCTAGAAAAAATGCCTAAAACAGAGTATATTGACGGAGTTACCACGTCACGAATA AGCCAAAGTGAGAGCATACC
Downstream 100 bases:
>100_bases ACCGAGAAAAAAAGACAAGGTTACATCCTTGTCTTTTTTGTTACGATGACTAAATGTTAAGAGAAAACCTTATTCAACGA TTGGAATAATTTTCGTCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKYQKLENQEAHWKWLYLIKKHREGENITRYEERSLSEDKVKQLLSQQNQPQAIENWIKAHLSPHLMIKLDQAIRARRKR FFNGEKQSTKKKSIDLEYAVWLRLSRYSRKMKMTLSETITYMIDERESKAQYEHQISAMKAGLKDLLK
Sequences:
>Translated_148_residues MKYQKLENQEAHWKWLYLIKKHREGENITRYEERSLSEDKVKQLLSQQNQPQAIENWIKAHLSPHLMIKLDQAIRARRKR FFNGEKQSTKKKSIDLEYAVWLRLSRYSRKMKMTLSETITYMIDERESKAQYEHQISAMKAGLKDLLK >Mature_148_residues MKYQKLENQEAHWKWLYLIKKHREGENITRYEERSLSEDKVKQLLSQQNQPQAIENWIKAHLSPHLMIKLDQAIRARRKR FFNGEKQSTKKKSIDLEYAVWLRLSRYSRKMKMTLSETITYMIDERESKAQYEHQISAMKAGLKDLLK
Specific function: Unknown
COG id: COG3120
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0268 family
Homologues:
Organism=Escherichia coli, GI1787190, Length=147, Percent_Identity=51.7006802721088, Blast_Score=154, Evalue=3e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y482_PASMU (Q9CNF0)
Other databases:
- EMBL: AE004439 - RefSeq: NP_245419.1 - GeneID: 1243829 - GenomeReviews: AE004439_GR - KEGG: pmu:PM0482 - NMPDR: fig|272843.1.peg.482 - HOGENOM: HBG297085 - OMA: ECGWKWK - ProtClustDB: PRK05097 - BioCyc: PMUL272843:PM0482-MONOMER - HAMAP: MF_01073 - InterPro: IPR009390 - ProDom: PD033720
Pfam domain/function: PF06303 DUF1047
EC number: NA
Molecular weight: Translated: 17926; Mature: 17926
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYQKLENQEAHWKWLYLIKKHREGENITRYEERSLSEDKVKQLLSQQNQPQAIENWIKA CCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHH HLSPHLMIKLDQAIRARRKRFFNGEKQSTKKKSIDLEYAVWLRLSRYSRKMKMTLSETIT HCCCHHEEEHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH YMIDERESKAQYEHQISAMKAGLKDLLK HHHCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKYQKLENQEAHWKWLYLIKKHREGENITRYEERSLSEDKVKQLLSQQNQPQAIENWIKA CCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHH HLSPHLMIKLDQAIRARRKRFFNGEKQSTKKKSIDLEYAVWLRLSRYSRKMKMTLSETIT HCCCHHEEEHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH YMIDERESKAQYEHQISAMKAGLKDLLK HHHCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100