Click here to switch to the map view.

The map label for this gene is nspC

Identifier: 15602236

GI number: 15602236

Start: 435794

End: 436915

Strand: Direct

Name: nspC

Synonym: PM0371

Alternate gene names: NA

Gene position: 435794-436915 (Clockwise)

Preceding gene: 15602233

Following gene: 15602237

Centisome position: 19.3

GC content: 39.57

Gene sequence:

>1122_bases
CTGAGAATGACCACATTACAAACACCTTATTATCTGATTGATAAAAGCAAGTTATTACGCAACATGGAAAAAATTGCCTA
TTTACGTGAAAAATCGGGGGCAAAAGCATTGTTGGCGCTAAAATGTTTTGCAACTTGGGGGGTGTTTGATTTTATGTGTC
AATACATGGATGGTACAACCTCCTCCTCACTTTATGAAGTTAAATTAGGTCGCGAGAAGTTTGGTGGCGAAACCCATGCG
TATAGCGTGGCATATTCGCCTGAAGAAATTGGCGAAGTGGTGGCAAACGCAGATAAAATTATTTTTAACTCCATTAGTCA
ATTACAGCGTTTTTGTGATCACACCACGCATTTACCACGTGGTTTACGTGTAAATCCGCGAGTCAGTACATCGAGTTTTT
TATTAGCTGATCCTGCGCGTCCACACAGTCGTTTAGGGGAGTGGGATGTCGCCAAAATCCGTGATGTGATGCCATTAATC
AATGGGTTTATGTTTCATAATAACTGTGAAAATGAAGATTTTGGTAAGTTTTGTGAGATGTTAGATCGCATTGAACAGGA
ATTTGGTGAATTATTGCATCAGGTCGATTGGGTCAGTCTCGGCGGTGGTATTCACTTTACGGGTGAAAACTATCCTTTAG
AGGCATTTGCAGAACGGTTAAAACAATTTTCTGCAAAATTTGGCGTGCAAGTGTATTTAGAACCCGGTGAAGCCGCGATT
ACTTTAAGTACAAGTTTAGAAGTCACCGTCTTAGATATTCTCAATAATGGTAAAGAATTGGCGATTGTGGATGCTGCAAC
AGAAGCGCACATGTTAGATCTTTTAATTTATCGTTCTGAAGCTAAATTATTACCAGATGCGTTTCAAGGTAAAGGCGACT
ATCAATATATGGTTTGTGGTAAATCTTGCTTAGCGGGTGATATTTTTGGCGAATACCGTTTTGAGAAACCATTACAAATT
GGTGATCGTATCTCATTTTGTGATGCGGCTGGTTATACTATGGTGAAGAAAAATTGGTTTAATGGCGTGAATATGCCTGC
CATTGCGATTAAAGAGCTCGATGGGCGTATTCGCGTTGTGAAAACATTTGGCTATCAAGATTATGTTGAGAGTTTGTCTT
AA

Upstream 100 bases:

>100_bases
CATTTTAGAATCGATTGAAAACGATTGCGCATTCTAATTCCTACGCTATAATACGGCGCTTTGACAAAGATTGAGATGAC
GTAACGAACGAAAGAGGTAA

Downstream 100 bases:

>100_bases
GCAAGAAAAGTGCGGGACGTTTTATCAAAATATTGAAATGACATTAGGTTGTCATGCCGTTTTTTTGTCTTATTATGCCA
TATGATAGGGCAAACACCTT

Product: NspC

Products: NA

Alternate protein names: Carboxynorspermidine Decarboxylase NspC; Diaminopimelate Decarboxylase; Pyridoxal-Dependent Decarboxylase NspC; Carboxynorspermidine/Carboxyspermidine Decarboxylase; Pyridoxal-Dependent Decarboxylase; Carboxynorspermide Decarboxylase; LOW QUALITY PROTEIN Orn/DAP/Arg Decarboxylase; 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MRMTTLQTPYYLIDKSKLLRNMEKIAYLREKSGAKALLALKCFATWGVFDFMCQYMDGTTSSSLYEVKLGREKFGGETHA
YSVAYSPEEIGEVVANADKIIFNSISQLQRFCDHTTHLPRGLRVNPRVSTSSFLLADPARPHSRLGEWDVAKIRDVMPLI
NGFMFHNNCENEDFGKFCEMLDRIEQEFGELLHQVDWVSLGGGIHFTGENYPLEAFAERLKQFSAKFGVQVYLEPGEAAI
TLSTSLEVTVLDILNNGKELAIVDAATEAHMLDLLIYRSEAKLLPDAFQGKGDYQYMVCGKSCLAGDIFGEYRFEKPLQI
GDRISFCDAAGYTMVKKNWFNGVNMPAIAIKELDGRIRVVKTFGYQDYVESLS

Sequences:

>Translated_373_residues
MRMTTLQTPYYLIDKSKLLRNMEKIAYLREKSGAKALLALKCFATWGVFDFMCQYMDGTTSSSLYEVKLGREKFGGETHA
YSVAYSPEEIGEVVANADKIIFNSISQLQRFCDHTTHLPRGLRVNPRVSTSSFLLADPARPHSRLGEWDVAKIRDVMPLI
NGFMFHNNCENEDFGKFCEMLDRIEQEFGELLHQVDWVSLGGGIHFTGENYPLEAFAERLKQFSAKFGVQVYLEPGEAAI
TLSTSLEVTVLDILNNGKELAIVDAATEAHMLDLLIYRSEAKLLPDAFQGKGDYQYMVCGKSCLAGDIFGEYRFEKPLQI
GDRISFCDAAGYTMVKKNWFNGVNMPAIAIKELDGRIRVVKTFGYQDYVESLS
>Mature_373_residues
MRMTTLQTPYYLIDKSKLLRNMEKIAYLREKSGAKALLALKCFATWGVFDFMCQYMDGTTSSSLYEVKLGREKFGGETHA
YSVAYSPEEIGEVVANADKIIFNSISQLQRFCDHTTHLPRGLRVNPRVSTSSFLLADPARPHSRLGEWDVAKIRDVMPLI
NGFMFHNNCENEDFGKFCEMLDRIEQEFGELLHQVDWVSLGGGIHFTGENYPLEAFAERLKQFSAKFGVQVYLEPGEAAI
TLSTSLEVTVLDILNNGKELAIVDAATEAHMLDLLIYRSEAKLLPDAFQGKGDYQYMVCGKSCLAGDIFGEYRFEKPLQI
GDRISFCDAAGYTMVKKNWFNGVNMPAIAIKELDGRIRVVKTFGYQDYVESLS

Specific function: Unknown

COG id: COG0019

COG function: function code E; Diaminopimelate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42096; Mature: 42096

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMTTLQTPYYLIDKSKLLRNMEKIAYLREKSGAKALLALKCFATWGVFDFMCQYMDGTT
CCCEEECCCEEEECHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCC
SSSLYEVKLGREKFGGETHAYSVAYSPEEIGEVVANADKIIFNSISQLQRFCDHTTHLPR
CCCEEEEEECHHHCCCCCEEEEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
GLRVNPRVSTSSFLLADPARPHSRLGEWDVAKIRDVMPLINGFMFHNNCENEDFGKFCEM
CCCCCCCCCCCCEEEECCCCCHHHCCCCHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHH
LDRIEQEFGELLHQVDWVSLGGGIHFTGENYPLEAFAERLKQFSAKFGVQVYLEPGEAAI
HHHHHHHHHHHHHHCCEEEECCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEE
TLSTSLEVTVLDILNNGKELAIVDAATEAHMLDLLIYRSEAKLLPDAFQGKGDYQYMVCG
EEECCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCHHHCCCCCEEEEEEC
KSCLAGDIFGEYRFEKPLQIGDRISFCDAAGYTMVKKNWFNGVNMPAIAIKELDGRIRVV
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCEEEE
KTFGYQDYVESLS
EECCHHHHHHHCC
>Mature Secondary Structure
MRMTTLQTPYYLIDKSKLLRNMEKIAYLREKSGAKALLALKCFATWGVFDFMCQYMDGTT
CCCEEECCCEEEECHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCC
SSSLYEVKLGREKFGGETHAYSVAYSPEEIGEVVANADKIIFNSISQLQRFCDHTTHLPR
CCCEEEEEECHHHCCCCCEEEEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
GLRVNPRVSTSSFLLADPARPHSRLGEWDVAKIRDVMPLINGFMFHNNCENEDFGKFCEM
CCCCCCCCCCCCEEEECCCCCHHHCCCCHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHH
LDRIEQEFGELLHQVDWVSLGGGIHFTGENYPLEAFAERLKQFSAKFGVQVYLEPGEAAI
HHHHHHHHHHHHHHCCEEEECCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEE
TLSTSLEVTVLDILNNGKELAIVDAATEAHMLDLLIYRSEAKLLPDAFQGKGDYQYMVCG
EEECCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCHHHCCCCCEEEEEEC
KSCLAGDIFGEYRFEKPLQIGDRISFCDAAGYTMVKKNWFNGVNMPAIAIKELDGRIRVV
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCEEEE
KTFGYQDYVESLS
EECCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA