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The map label for this gene is ybfE [H]

Identifier: 15602219

GI number: 15602219

Start: 414396

End: 414680

Strand: Reverse

Name: ybfE [H]

Synonym: PM0354

Alternate gene names: 15602219

Gene position: 414680-414396 (Counterclockwise)

Preceding gene: 15602220

Following gene: 15602218

Centisome position: 18.37

GC content: 35.44

Gene sequence:

>285_bases
ATGGCAAAACAAGACGCAGATTGTATTACATTGGATCTGTTTGCTAATACTCGCAAAGTTGGACGCCCAAAAACAAATCC
ACTGAGTCGTGAACAACAAATTCGTATCAATAAACGTAATCAGTTAAAACGGGATAAATCCATCGGGTTAAAACGGGTCG
AACTTAAATTACACACGGATTTAGTTGAGCAACTAGAAGATTTAGCGGCAAATTTGCATGTTAGTCGATCAGAATTGATT
GTAACGATTTTACAAGATTATTTTAATATTCAAGAAGATAGGTAG

Upstream 100 bases:

>100_bases
ATTCGTGTTTTAATCCCACATAAATTGTGTTATAGTTCAGCATTAATTTAGTTGTGGCTTATCATTCTCACTTAGCCACA
GATTTTCAGTGATTTGATAG

Downstream 100 bases:

>100_bases
CAAAAATGGCTGTTGTTGGTTTATTTTATGGCAGTGATACAGGCAATACCGAAAATATTGCCAAAATGATTCAAAAACAA
CTCGGTAGTGACTTAGTTGA

Product: LexA regulated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MAKQDADCITLDLFANTRKVGRPKTNPLSREQQIRINKRNQLKRDKSIGLKRVELKLHTDLVEQLEDLAANLHVSRSELI
VTILQDYFNIQEDR

Sequences:

>Translated_94_residues
MAKQDADCITLDLFANTRKVGRPKTNPLSREQQIRINKRNQLKRDKSIGLKRVELKLHTDLVEQLEDLAANLHVSRSELI
VTILQDYFNIQEDR
>Mature_93_residues
AKQDADCITLDLFANTRKVGRPKTNPLSREQQIRINKRNQLKRDKSIGLKRVELKLHTDLVEQLEDLAANLHVSRSELIV
TILQDYFNIQEDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081770, Length=84, Percent_Identity=65.4761904761905, Blast_Score=107, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002145 [H]

Pfam domain/function: PF01402 RHH_1 [H]

EC number: NA

Molecular weight: Translated: 10969; Mature: 10838

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQDADCITLDLFANTRKVGRPKTNPLSREQQIRINKRNQLKRDKSIGLKRVELKLHTD
CCCCCCCEEEEEECCCCHHCCCCCCCCCCCCHHEEECCHHHHHHHHHCCEEEEHHHHHHH
LVEQLEDLAANLHVSRSELIVTILQDYFNIQEDR
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AKQDADCITLDLFANTRKVGRPKTNPLSREQQIRINKRNQLKRDKSIGLKRVELKLHTD
CCCCCCEEEEEECCCCHHCCCCCCCCCCCCHHEEECCHHHHHHHHHCCEEEEHHHHHHH
LVEQLEDLAANLHVSRSELIVTILQDYFNIQEDR
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]