| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15602210
Identifier: 15602210
GI number: 15602210
Start: 407639
End: 408340
Strand: Reverse
Name: 15602210
Synonym: PM0345
Alternate gene names: NA
Gene position: 408340-407639 (Counterclockwise)
Preceding gene: 15602211
Following gene: 15602206
Centisome position: 18.09
GC content: 40.74
Gene sequence:
>702_bases ATGACAGAACAAAACATCCCTACGAAAAAAACACGCAAAGGCAAAGATCCTCACGCGCCTTTTGTACGCGAAAAATTATC CCTACCAAATGGGCATAACAAATTGTTATTGCATTCTTGTTGTGCGCCTTGCTCGGGAGAAGTAATGGAGGCAATTCATG CTTCAGGTATTGAATTTACTATTTACTTCTACAACCCAAACATTCACCCATTAAAAGAATATCTCATTCGTAAAGAAGAA AATATTCGTTTTGCGGAGAAATGGGGCATTCCGTTTATTGATGCCGATTATGATCGTCAAGAATGGTTTGACCGTGCCAA AGGCATGGAAGATGAGCCAGAGCGTGGTATTCGTTGCACTATGTGCTTTGATATGCGTTTTGAAAAAGCTGCAGAATATG CACACAACAATGGTTTCCCCGTATTTACTAGCTGCTTAGGTATTTCGCGTTGGAAAGACATGAACCAAATCAATGGTTGT GGACACCGTGCCGCCGAAAAATATGATGATGTAGTGTATTGGGATTATAACTGGCGTAAAGGTGGTGGCTCACAACGTAT GATTGAAATCAGTAAGCGTGAACGTTTTTACCAGCAAGAATATTGCGGTTGTGTGTATTCTTTGCGTGACACGAATAAAT GGCGTGAAGCAAACGGACGCCAAAAAATTGAAATTGGCAAATTGTATTATTCCGCCGATTAA
Upstream 100 bases:
>100_bases ATCCGTCGATCGCGCTTATTAACCACTTAATAAGGCGAGACATGTTAGCGTAACGACCGCCTAAAGTGCGGTCATTTATT TAGTAATTTTAAACACGACA
Downstream 100 bases:
>100_bases AACAACCAAGTAAACCATCGTGCCGTCATATAACATGACGGCACTTTTTTAGGCTTTATATATGCAACGTTTTCGCCAAT CTTTCGAAACCCAATGCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MTEQNIPTKKTRKGKDPHAPFVREKLSLPNGHNKLLLHSCCAPCSGEVMEAIHASGIEFTIYFYNPNIHPLKEYLIRKEE NIRFAEKWGIPFIDADYDRQEWFDRAKGMEDEPERGIRCTMCFDMRFEKAAEYAHNNGFPVFTSCLGISRWKDMNQINGC GHRAAEKYDDVVYWDYNWRKGGGSQRMIEISKRERFYQQEYCGCVYSLRDTNKWREANGRQKIEIGKLYYSAD
Sequences:
>Translated_233_residues MTEQNIPTKKTRKGKDPHAPFVREKLSLPNGHNKLLLHSCCAPCSGEVMEAIHASGIEFTIYFYNPNIHPLKEYLIRKEE NIRFAEKWGIPFIDADYDRQEWFDRAKGMEDEPERGIRCTMCFDMRFEKAAEYAHNNGFPVFTSCLGISRWKDMNQINGC GHRAAEKYDDVVYWDYNWRKGGGSQRMIEISKRERFYQQEYCGCVYSLRDTNKWREANGRQKIEIGKLYYSAD >Mature_232_residues TEQNIPTKKTRKGKDPHAPFVREKLSLPNGHNKLLLHSCCAPCSGEVMEAIHASGIEFTIYFYNPNIHPLKEYLIRKEEN IRFAEKWGIPFIDADYDRQEWFDRAKGMEDEPERGIRCTMCFDMRFEKAAEYAHNNGFPVFTSCLGISRWKDMNQINGCG HRAAEKYDDVVYWDYNWRKGGGSQRMIEISKRERFYQQEYCGCVYSLRDTNKWREANGRQKIEIGKLYYSAD
Specific function: Unknown
COG id: COG1636
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003828 [H]
Pfam domain/function: PF02677 DUF208 [H]
EC number: NA
Molecular weight: Translated: 27440; Mature: 27309
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQNIPTKKTRKGKDPHAPFVREKLSLPNGHNKLLLHSCCAPCSGEVMEAIHASGIEFT CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEHHHHCCCCCHHHHHHHHCCCCEEE IYFYNPNIHPLKEYLIRKEENIRFAEKWGIPFIDADYDRQEWFDRAKGMEDEPERGIRCT EEEECCCCCHHHHHHHCCCCCCEEHHHCCCCEECCCCCHHHHHHHHCCCCCCCCCCCEEE MCFDMRFEKAAEYAHNNGFPVFTSCLGISRWKDMNQINGCGHRAAEKYDDVVYWDYNWRK EEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCCCC GGGSQRMIEISKRERFYQQEYCGCVYSLRDTNKWREANGRQKIEIGKLYYSAD CCCCCCEEEHHHHHHHHHHHHHHHHEEHHCCCHHHHCCCCCEEEEEEEEEECC >Mature Secondary Structure TEQNIPTKKTRKGKDPHAPFVREKLSLPNGHNKLLLHSCCAPCSGEVMEAIHASGIEFT CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEHHHHCCCCCHHHHHHHHCCCCEEE IYFYNPNIHPLKEYLIRKEENIRFAEKWGIPFIDADYDRQEWFDRAKGMEDEPERGIRCT EEEECCCCCHHHHHHHCCCCCCEEHHHCCCCEECCCCCHHHHHHHHCCCCCCCCCCCEEE MCFDMRFEKAAEYAHNNGFPVFTSCLGISRWKDMNQINGCGHRAAEKYDDVVYWDYNWRK EEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCCCC GGGSQRMIEISKRERFYQQEYCGCVYSLRDTNKWREANGRQKIEIGKLYYSAD CCCCCCEEEHHHHHHHHHHHHHHHHEEHHCCCHHHHCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]