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The map label for this gene is recN [H]

Identifier: 15602197

GI number: 15602197

Start: 385501

End: 387177

Strand: Reverse

Name: recN [H]

Synonym: PM0332

Alternate gene names: 15602197

Gene position: 387177-385501 (Counterclockwise)

Preceding gene: 15602198

Following gene: 15602195

Centisome position: 17.15

GC content: 41.2

Gene sequence:

>1677_bases
ATGCTTATTCAACTCACTATTAATCATTTTGCGATCGTTCGTCATTTGAATATTGAATTTACGCAAGGTATGTCCGTCAT
TACAGGTGAAACTGGTGCAGGAAAATCCATTGCGCTTGATGCATTAGGGGTTTGTCTTGGTCAGCGTACCGATATCAGTA
TGCTACGCGAAGGGCAAGAACGTGCGGATATTAGCGCGACGTTTGCTCTTGAGAAAAATGCCCCTGCGCGTCAATGGTTA
ATACAACAGGAATTACACGACACGGAAAATCCTGAAGAATGTATTTTGCGTCGTCTTATTAACCATGACGGTCGCTCTAA
AGCCTTTATTAATGGGATTCCTGTTTCAGTAGCTCAGCTGAAAGAATTTGGTCAATATCTTGTCCATATTAATGGACAAC
ATGCCTCCCAATTGTTACTCAAACCAGAATACCAGCTACAGTTGTTAGATCGATTCTGTGGACATACTGCCCTTCTGAAC
CAAATGCAAACAGATTATCAAGCTTGGAAAGCCTTACAATATCAAGTACAAACTTTTAAACAACAAGTGGCAGAAAATGA
AGCGAAGAAGCAGTTACTGCAATATCAAGTTGAAGAACTGGATGCGTTTAATTTGCGTGACAATGAATATGTAGAATTAG
AAGAAGAACATAAACGTCTTTCCAACACGGAACAATTAACCACGCTTTCACAATCTACACTGCAACTATTAAGTGAAAAT
GAGACAGTCAATATTGATTCTCTGCTTTATCGAGCAACACAACACCTTGCAGATCTCTGTGAGTTAGATCAACGCTATAG
CAATGTCGCACATCTATTGCAAGACGCCTTGATCCAAATTCAAGAAGCAAGCCATGAAATGCAGCAGCTCGCAAGCGATA
TAGAACAAGATCCGGCTTTACTGCACGATATCGAGCAACGCATGGGACAAGCCTTACAGCTTGCGCGTAAGCATCATGTC
AAACCTGAAAATTTAGTTGAATTACACCGCACTTTACAGCAAGAATTGACTCAATTAGTCGATTTTTCTGAAAGTGAACA
GCGTTTAATTGCACAAGAACAAATCGCCTATGCGAAAGCCCAAGCGAGTGCATTGGCGTTACATCAGAGTCGCCAACAAG
GCGCCAATCAATTAGCGCAACAAGTTAGCAAATCCATTAAACAATTAGCCATGGAAAATGCCGAGTTTTTTATTGAACTC
AATCCTGAACATGACAAAATAACAAGCCATGGCATTAACAGCATACAATTTAACTTACGCAGTAACTTAGGGCAAAGTGC
GCAACCGCTGAATAAAATCGCCTCAGGTGGAGAACTCTCCCGTATTTCACTGGCGATCCAAGTGCTTACTTCAGATAAAT
CCGCTATTCCAACTTTAATTTTTGATGAAGTAGATGTGGGCATTAGTGGTGCCACCGCCAGTGTCGTCGGAAAATTACTG
CGTAAACTCGGACAACGTTGCCAAGTATTATGTATCACTCATTTACCACAAGTCGCCTGCCAAGGTCATCAACACTTTAG
TGTAGAAAAACACATTATTGACGAAAAAACAGAAACTAAAATGACCGCACTTTCACCGGCACAGCGCGTAAAAGCATTAG
CTAAATTGTTGGGTGGTAGTAAGATTACTGACAGTGCGTTGGCAAATGCACAAGAGATGTTGGATCTCGTTTCCTAA

Upstream 100 bases:

>100_bases
ACGCAATTCCGTTTAAAAATGCTTAAAATTTAGCAAAAGCACTTTACTGTATATAAAAACAGTTATAAACTGATAAATAT
ACAGTAAGGGAGATTTTGCA

Downstream 100 bases:

>100_bases
CAAACTTCACCACAAAAAATGGGCAAATCATATTGCCCATTATTTTTTATATCATTTTCAGGTTTAAAAACGATAACCTA
AGCCAACAAAGAACACCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MLIQLTINHFAIVRHLNIEFTQGMSVITGETGAGKSIALDALGVCLGQRTDISMLREGQERADISATFALEKNAPARQWL
IQQELHDTENPEECILRRLINHDGRSKAFINGIPVSVAQLKEFGQYLVHINGQHASQLLLKPEYQLQLLDRFCGHTALLN
QMQTDYQAWKALQYQVQTFKQQVAENEAKKQLLQYQVEELDAFNLRDNEYVELEEEHKRLSNTEQLTTLSQSTLQLLSEN
ETVNIDSLLYRATQHLADLCELDQRYSNVAHLLQDALIQIQEASHEMQQLASDIEQDPALLHDIEQRMGQALQLARKHHV
KPENLVELHRTLQQELTQLVDFSESEQRLIAQEQIAYAKAQASALALHQSRQQGANQLAQQVSKSIKQLAMENAEFFIEL
NPEHDKITSHGINSIQFNLRSNLGQSAQPLNKIASGGELSRISLAIQVLTSDKSAIPTLIFDEVDVGISGATASVVGKLL
RKLGQRCQVLCITHLPQVACQGHQHFSVEKHIIDEKTETKMTALSPAQRVKALAKLLGGSKITDSALANAQEMLDLVS

Sequences:

>Translated_558_residues
MLIQLTINHFAIVRHLNIEFTQGMSVITGETGAGKSIALDALGVCLGQRTDISMLREGQERADISATFALEKNAPARQWL
IQQELHDTENPEECILRRLINHDGRSKAFINGIPVSVAQLKEFGQYLVHINGQHASQLLLKPEYQLQLLDRFCGHTALLN
QMQTDYQAWKALQYQVQTFKQQVAENEAKKQLLQYQVEELDAFNLRDNEYVELEEEHKRLSNTEQLTTLSQSTLQLLSEN
ETVNIDSLLYRATQHLADLCELDQRYSNVAHLLQDALIQIQEASHEMQQLASDIEQDPALLHDIEQRMGQALQLARKHHV
KPENLVELHRTLQQELTQLVDFSESEQRLIAQEQIAYAKAQASALALHQSRQQGANQLAQQVSKSIKQLAMENAEFFIEL
NPEHDKITSHGINSIQFNLRSNLGQSAQPLNKIASGGELSRISLAIQVLTSDKSAIPTLIFDEVDVGISGATASVVGKLL
RKLGQRCQVLCITHLPQVACQGHQHFSVEKHIIDEKTETKMTALSPAQRVKALAKLLGGSKITDSALANAQEMLDLVS
>Mature_558_residues
MLIQLTINHFAIVRHLNIEFTQGMSVITGETGAGKSIALDALGVCLGQRTDISMLREGQERADISATFALEKNAPARQWL
IQQELHDTENPEECILRRLINHDGRSKAFINGIPVSVAQLKEFGQYLVHINGQHASQLLLKPEYQLQLLDRFCGHTALLN
QMQTDYQAWKALQYQVQTFKQQVAENEAKKQLLQYQVEELDAFNLRDNEYVELEEEHKRLSNTEQLTTLSQSTLQLLSEN
ETVNIDSLLYRATQHLADLCELDQRYSNVAHLLQDALIQIQEASHEMQQLASDIEQDPALLHDIEQRMGQALQLARKHHV
KPENLVELHRTLQQELTQLVDFSESEQRLIAQEQIAYAKAQASALALHQSRQQGANQLAQQVSKSIKQLAMENAEFFIEL
NPEHDKITSHGINSIQFNLRSNLGQSAQPLNKIASGGELSRISLAIQVLTSDKSAIPTLIFDEVDVGISGATASVVGKLL
RKLGQRCQVLCITHLPQVACQGHQHFSVEKHIIDEKTETKMTALSPAQRVKALAKLLGGSKITDSALANAQEMLDLVS

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=554, Percent_Identity=48.014440433213, Blast_Score=507, Evalue=1e-145,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 62526; Mature: 62526

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIQLTINHFAIVRHLNIEFTQGMSVITGETGAGKSIALDALGVCLGQRTDISMLREGQE
CEEEEEEHHHHHHHHCCCEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHCCHH
RADISATFALEKNAPARQWLIQQELHDTENPEECILRRLINHDGRSKAFINGIPVSVAQL
HHCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCHHHHHH
KEFGQYLVHINGQHASQLLLKPEYQLQLLDRFCGHTALLNQMQTDYQAWKALQYQVQTFK
HHHHHHHEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQVAENEAKKQLLQYQVEELDAFNLRDNEYVELEEEHKRLSNTEQLTTLSQSTLQLLSEN
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHCCCHHHHHHHHHHHHHHHCCC
ETVNIDSLLYRATQHLADLCELDQRYSNVAHLLQDALIQIQEASHEMQQLASDIEQDPAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LHDIEQRMGQALQLARKHHVKPENLVELHRTLQQELTQLVDFSESEQRLIAQEQIAYAKA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QASALALHQSRQQGANQLAQQVSKSIKQLAMENAEFFIELNPEHDKITSHGINSIQFNLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCEEEEEH
SNLGQSAQPLNKIASGGELSRISLAIQVLTSDKSAIPTLIFDEVDVGISGATASVVGKLL
HCCCCCHHHHHHHHCCCCHHHHHHEEHEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHH
RKLGQRCQVLCITHLPQVACQGHQHFSVEKHIIDEKTETKMTALSPAQRVKALAKLLGGS
HHHHHHHEEHHHHHCHHHHHCCCCCCCHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCC
KITDSALANAQEMLDLVS
CCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLIQLTINHFAIVRHLNIEFTQGMSVITGETGAGKSIALDALGVCLGQRTDISMLREGQE
CEEEEEEHHHHHHHHCCCEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHCCHH
RADISATFALEKNAPARQWLIQQELHDTENPEECILRRLINHDGRSKAFINGIPVSVAQL
HHCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCHHHHHH
KEFGQYLVHINGQHASQLLLKPEYQLQLLDRFCGHTALLNQMQTDYQAWKALQYQVQTFK
HHHHHHHEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQVAENEAKKQLLQYQVEELDAFNLRDNEYVELEEEHKRLSNTEQLTTLSQSTLQLLSEN
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHCCCHHHHHHHHHHHHHHHCCC
ETVNIDSLLYRATQHLADLCELDQRYSNVAHLLQDALIQIQEASHEMQQLASDIEQDPAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LHDIEQRMGQALQLARKHHVKPENLVELHRTLQQELTQLVDFSESEQRLIAQEQIAYAKA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QASALALHQSRQQGANQLAQQVSKSIKQLAMENAEFFIELNPEHDKITSHGINSIQFNLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCEEEEEH
SNLGQSAQPLNKIASGGELSRISLAIQVLTSDKSAIPTLIFDEVDVGISGATASVVGKLL
HCCCCCHHHHHHHHCCCCHHHHHHEEHEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHH
RKLGQRCQVLCITHLPQVACQGHQHFSVEKHIIDEKTETKMTALSPAQRVKALAKLLGGS
HHHHHHHEEHHHHHCHHHHHCCCCCCCHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCC
KITDSALANAQEMLDLVS
CCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]