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The map label for this gene is ompW [H]

Identifier: 15602196

GI number: 15602196

Start: 384823

End: 385437

Strand: Direct

Name: ompW [H]

Synonym: PM0331

Alternate gene names: 15602196

Gene position: 384823-385437 (Clockwise)

Preceding gene: 15602188

Following gene: 15602199

Centisome position: 17.05

GC content: 40.33

Gene sequence:

>615_bases
ATGAAAAAGACAGTATTAGCATTAGGTGTGATGGCAGCATTAGTGGCAGGTTCGGCAGTGGCACATCAAGCGGGTAGTGT
GATTGTGCGAGGCGGTCCAATTTTAGTAGTGCCAAACGCGTCGACGAATCATGATGGGTTTAAGTTTGATGTCAATTCCA
ACGCACAATTAGGCTTAACCGCCACTTATATGGCAACAGATAATCTTGGTGTTGAGTTATTAGCGGCGACACCATTCAGC
CATGAGATTACATTAGGCAATACCTTAGTTGGTAAAACGAAGCATTTACCGCCAAGTTTATATGCACAATATTATTTCTT
AGACAAAGATGCGAAAGCTCGTCCTTATGTGGGGGCGGGTGTTAACTACACCACATTCTTTAGTGAAAAAGCAGTATTAA
ATGGCGTGACTGATCTGAAATTAAAAGATTCTTGGGGACCTGCGTTCAATGCTGGGGTAGATATCCAAGTCGCAGATAAC
TTATTTTTAAATACGGCTATTTGGTATGCAAAAATCAAAAGTAAAGCCACATTTAAAGTTGGTGATGTAGAGCATAAAGT
CAATGTGAAATTAGATCCAACGGTGTTCTTTGTTGGCTTAGGTTATCGTTTTTAA

Upstream 100 bases:

>100_bases
GATCAGTAAATCGCAGTTTGTGACATGGTATGTTAAATAAGCTAAAAAGACGTAATTTTTAGCGGACTTTTGACAATTTA
TAGACAGATGAGGTTTTGCA

Downstream 100 bases:

>100_bases
ACCTGAAAATGATATAAAAAATAATGGGCAATATGATTTGCCCATTTTTTGTGGTGAAGTTTGTTAGGAAACGAGATCCA
ACATCTCTTGTGCATTTGCC

Product: OmpW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MKKTVLALGVMAALVAGSAVAHQAGSVIVRGGPILVVPNASTNHDGFKFDVNSNAQLGLTATYMATDNLGVELLAATPFS
HEITLGNTLVGKTKHLPPSLYAQYYFLDKDAKARPYVGAGVNYTTFFSEKAVLNGVTDLKLKDSWGPAFNAGVDIQVADN
LFLNTAIWYAKIKSKATFKVGDVEHKVNVKLDPTVFFVGLGYRF

Sequences:

>Translated_204_residues
MKKTVLALGVMAALVAGSAVAHQAGSVIVRGGPILVVPNASTNHDGFKFDVNSNAQLGLTATYMATDNLGVELLAATPFS
HEITLGNTLVGKTKHLPPSLYAQYYFLDKDAKARPYVGAGVNYTTFFSEKAVLNGVTDLKLKDSWGPAFNAGVDIQVADN
LFLNTAIWYAKIKSKATFKVGDVEHKVNVKLDPTVFFVGLGYRF
>Mature_204_residues
MKKTVLALGVMAALVAGSAVAHQAGSVIVRGGPILVVPNASTNHDGFKFDVNSNAQLGLTATYMATDNLGVELLAATPFS
HEITLGNTLVGKTKHLPPSLYAQYYFLDKDAKARPYVGAGVNYTTFFSEKAVLNGVTDLKLKDSWGPAFNAGVDIQVADN
LFLNTAIWYAKIKSKATFKVGDVEHKVNVKLDPTVFFVGLGYRF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=212, Percent_Identity=46.6981132075472, Blast_Score=182, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 21870; Mature: 21870

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS00695 ENT_VIR_OMP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTVLALGVMAALVAGSAVAHQAGSVIVRGGPILVVPNASTNHDGFKFDVNSNAQLGLT
CCCHHHHHHHHHHHHHCCHHHHCCCCEEEECCCEEEECCCCCCCCCEEEEECCCCEEEEE
ATYMATDNLGVELLAATPFSHEITLGNTLVGKTKHLPPSLYAQYYFLDKDAKARPYVGAG
EEEEEECCCCEEEEEECCCCCEEEECCEEECCCCCCCHHHEEEEEEECCCCCCCCEEECC
VNYTTFFSEKAVLNGVTDLKLKDSWGPAFNAGVDIQVADNLFLNTAIWYAKIKSKATFKV
CCEEEEECCCHHHCCCEEEEEECCCCCCCCCCEEEEECCCEEEEHEEEEEEECCCCEEEE
GDVEHKVNVKLDPTVFFVGLGYRF
CCCCEEEEEEECCEEEEEEECCCC
>Mature Secondary Structure
MKKTVLALGVMAALVAGSAVAHQAGSVIVRGGPILVVPNASTNHDGFKFDVNSNAQLGLT
CCCHHHHHHHHHHHHHCCHHHHCCCCEEEECCCEEEECCCCCCCCCEEEEECCCCEEEEE
ATYMATDNLGVELLAATPFSHEITLGNTLVGKTKHLPPSLYAQYYFLDKDAKARPYVGAG
EEEEEECCCCEEEEEECCCCCEEEECCEEECCCCCCCHHHEEEEEEECCCCCCCCEEECC
VNYTTFFSEKAVLNGVTDLKLKDSWGPAFNAGVDIQVADNLFLNTAIWYAKIKSKATFKV
CCEEEEECCCHHHCCCEEEEEECCCCCCCCCCEEEEECCCEEEEHEEEEEEECCCCEEEE
GDVEHKVNVKLDPTVFFVGLGYRF
CCCCEEEEEEECCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2336399; 10952301 [H]