| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15602164
Identifier: 15602164
GI number: 15602164
Start: 348683
End: 349198
Strand: Direct
Name: 15602164
Synonym: PM0299
Alternate gene names: NA
Gene position: 348683-349198 (Clockwise)
Preceding gene: 15602163
Following gene: 15602165
Centisome position: 15.45
GC content: 38.18
Gene sequence:
>516_bases ATGACAACAAATCGTCAAGAAGTATTACAAAATCGTTTAGGTCCAGAAATTCAAGAGTTAAAGGCACAATGTAAAACAGT CATGCTCGCTACTGTCGGTGAAGATGGTAATCCCAATGTGAGTTATGCACCATTTGCAATTAATAATGGGGAATACCAAG TCTTTATTTCTACTATTGCACGTCATGCACGTAATCTACAAGAAGTACCAAAAGTTTCTTTAATGTTGATCGAAGATGAA AGTCAAAGTCGTCAGATTTTTGCTCGTCGTCGTTTATCTTTTGATGCGGTTGCGCGTGTTGTCGAGAGAGAAAGTGAAGA ATGGCATTCTGGCGTTGAGGCACTCAAAGCAAGACATGGTGCATTAATGGATGAATTGTCTCGGATGAAAGATTTTCATT TGTTTAGTTTTAAGCCCTCACAAGGGTTATTTGTAAAAGGTTTTGGTCAAGCTTTCCAAGTGAGTAATGATGATTTAGTG AGCTTTGTTCACTTGGTTGAAGGACACCAAGAATAA
Upstream 100 bases:
>100_bases AACTATTTTTAAAGTTTATTTGGGGCGCGATGCTGAGCGTCAACTATTTCCAGAACAAGTTCAAAAATTTAAAGCATTTA TTTAGAAGGTTAAAAAAGTA
Downstream 100 bases:
>100_bases ATTTTGTCAACTTTTTAGGGTATTTACTTGAGGTTAGGAAAATGCGTACAACAACAATAAAATTTTCTGCAATTACATTG GCATTATTGAGTTATTGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MTTNRQEVLQNRLGPEIQELKAQCKTVMLATVGEDGNPNVSYAPFAINNGEYQVFISTIARHARNLQEVPKVSLMLIEDE SQSRQIFARRRLSFDAVARVVERESEEWHSGVEALKARHGALMDELSRMKDFHLFSFKPSQGLFVKGFGQAFQVSNDDLV SFVHLVEGHQE
Sequences:
>Translated_171_residues MTTNRQEVLQNRLGPEIQELKAQCKTVMLATVGEDGNPNVSYAPFAINNGEYQVFISTIARHARNLQEVPKVSLMLIEDE SQSRQIFARRRLSFDAVARVVERESEEWHSGVEALKARHGALMDELSRMKDFHLFSFKPSQGLFVKGFGQAFQVSNDDLV SFVHLVEGHQE >Mature_170_residues TTNRQEVLQNRLGPEIQELKAQCKTVMLATVGEDGNPNVSYAPFAINNGEYQVFISTIARHARNLQEVPKVSLMLIEDES QSRQIFARRRLSFDAVARVVERESEEWHSGVEALKARHGALMDELSRMKDFHLFSFKPSQGLFVKGFGQAFQVSNDDLVS FVHLVEGHQE
Specific function: Unknown
COG id: COG0748
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019595 - InterPro: IPR011576 - InterPro: IPR012349 - InterPro: IPR009002 - InterPro: IPR014419 [H]
Pfam domain/function: PF10615 DUF2470; PF01243 Pyridox_oxidase [H]
EC number: NA
Molecular weight: Translated: 19405; Mature: 19274
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNRQEVLQNRLGPEIQELKAQCKTVMLATVGEDGNPNVSYAPFAINNGEYQVFISTIA CCCCHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCCCCCCEECCEEECCCCHHHHHHHHH RHARNLQEVPKVSLMLIEDESQSRQIFARRRLSFDAVARVVERESEEWHSGVEALKARHG HHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALMDELSRMKDFHLFSFKPSQGLFVKGFGQAFQVSNDDLVSFVHLVEGHQE HHHHHHHHHHHCCEEEECCCCCCEEEECCCEEECCCHHHHHHHHHHCCCCC >Mature Secondary Structure TTNRQEVLQNRLGPEIQELKAQCKTVMLATVGEDGNPNVSYAPFAINNGEYQVFISTIA CCCHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCCCCCCEECCEEECCCCHHHHHHHHH RHARNLQEVPKVSLMLIEDESQSRQIFARRRLSFDAVARVVERESEEWHSGVEALKARHG HHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALMDELSRMKDFHLFSFKPSQGLFVKGFGQAFQVSNDDLVSFVHLVEGHQE HHHHHHHHHHHCCEEEECCCCCCEEEECCCEEECCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]