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The map label for this gene is dppB [H]

Identifier: 15602102

GI number: 15602102

Start: 267681

End: 268685

Strand: Direct

Name: dppB [H]

Synonym: PM0237

Alternate gene names: 15602102

Gene position: 267681-268685 (Clockwise)

Preceding gene: 15602101

Following gene: 15602103

Centisome position: 11.86

GC content: 41.19

Gene sequence:

>1005_bases
ATGTTTCAATTTATTCTTAAACGTCTTTTCATGGTTATTCCAACGTTTATTGCAATAACCTTAATTACTTTTGCTTTAGT
GCATATGATCCCCGGTGATCCGATTGAAATTCGTATGGGGGAACGCGGTTTAACACCAGAAGTGCATGCCGAAATGATGC
AAAAATTAGGCTTGGATCGTCCTTTGCCTGAACAATACTTTAGCTATGTTAAAGGGGTCTTACAGGGGGATTTAGGCACC
TCATTTCGTAATAATGAACCTGTTTTAAAAGAGTTTTTTACTCTTTTCCCTGCAACCGTTGAGTTAGCTTTTTTTGCATT
ATTGTGGTCTTTAATTTTAGGGATATTTTTAGGTGTTATTGCGGCAGTCAAAAAAGAGTCTTGGATTTCACATACGGTGA
CATCTTTGTCGCTGACGGGGTATTCGATGCCGATTTTCTGGTGGGGATTGATTTTAATTCTTTATTTTTCTACTCCGCTT
GGTTTACCCGCTTCAGGACGCTTACCCGCTGAATATTGGATTGAAGCGGATACCGGTTTTATGCTGATTGATACTTGGAA
TTCTGATGAACCGGGGGCCTTCTTAGCTGCGATTAAATCACTCATTTTGCCCTCTATTGTGCTTGGCACGATTCCTCTCG
CGGTGATTACACGTATGACGCGTTCCTCGATGTTAGAAGTGTTAGGCGAAGATTATATTCGGACGGCAAAAGCGAAAGGG
CTAAATACCACGCGTATCGTGGTGGTACACGCATTACGTAATGCGTTGATTCCCGTAGTGACCGTGGTTGGCTTGATTAT
TGGACAACTGTTATCCGGAGCGGTATTAACGGAGAATATTTTCTCATGGCCGGGGATCGGTAAGTGGATTATTGATGCGA
TTAACTCGCGTGATTATCCTGTTTTACAAGGTTCGGTGCTGATTATTGCCACCTTAATTATTATTGTCAATTTAACAGTT
GATGTATTTTATGGCATCGTCAATCCACGTATTCGCCATACTTAA

Upstream 100 bases:

>100_bases
CTTATTTGCTATCTTTTTGACCGCTTATGCTTTTCCTCTGTGAAGAGGAATAAGGGATTCAAAGCTATAGATTCACAATT
ATAAATACAGCGAGTCTTCA

Downstream 100 bases:

>100_bases
TTTGATTTGATTGGAGTGAAAAATGTCAAGTACGACTACGGTTAGTTCACCCGCCCCAAAAACCCCGTTACAAGAATTCT
GGTTTTATTTTAAACAAAAT

Product: hypothetical protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MFQFILKRLFMVIPTFIAITLITFALVHMIPGDPIEIRMGERGLTPEVHAEMMQKLGLDRPLPEQYFSYVKGVLQGDLGT
SFRNNEPVLKEFFTLFPATVELAFFALLWSLILGIFLGVIAAVKKESWISHTVTSLSLTGYSMPIFWWGLILILYFSTPL
GLPASGRLPAEYWIEADTGFMLIDTWNSDEPGAFLAAIKSLILPSIVLGTIPLAVITRMTRSSMLEVLGEDYIRTAKAKG
LNTTRIVVVHALRNALIPVVTVVGLIIGQLLSGAVLTENIFSWPGIGKWIIDAINSRDYPVLQGSVLIIATLIIIVNLTV
DVFYGIVNPRIRHT

Sequences:

>Translated_334_residues
MFQFILKRLFMVIPTFIAITLITFALVHMIPGDPIEIRMGERGLTPEVHAEMMQKLGLDRPLPEQYFSYVKGVLQGDLGT
SFRNNEPVLKEFFTLFPATVELAFFALLWSLILGIFLGVIAAVKKESWISHTVTSLSLTGYSMPIFWWGLILILYFSTPL
GLPASGRLPAEYWIEADTGFMLIDTWNSDEPGAFLAAIKSLILPSIVLGTIPLAVITRMTRSSMLEVLGEDYIRTAKAKG
LNTTRIVVVHALRNALIPVVTVVGLIIGQLLSGAVLTENIFSWPGIGKWIIDAINSRDYPVLQGSVLIIATLIIIVNLTV
DVFYGIVNPRIRHT
>Mature_334_residues
MFQFILKRLFMVIPTFIAITLITFALVHMIPGDPIEIRMGERGLTPEVHAEMMQKLGLDRPLPEQYFSYVKGVLQGDLGT
SFRNNEPVLKEFFTLFPATVELAFFALLWSLILGIFLGVIAAVKKESWISHTVTSLSLTGYSMPIFWWGLILILYFSTPL
GLPASGRLPAEYWIEADTGFMLIDTWNSDEPGAFLAAIKSLILPSIVLGTIPLAVITRMTRSSMLEVLGEDYIRTAKAKG
LNTTRIVVVHALRNALIPVVTVVGLIIGQLLSGAVLTENIFSWPGIGKWIIDAINSRDYPVLQGSVLIIATLIIIVNLTV
DVFYGIVNPRIRHT

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=337, Percent_Identity=60.2373887240356, Blast_Score=411, Evalue=1e-116,
Organism=Escherichia coli, GI1787053, Length=338, Percent_Identity=38.4615384615385, Blast_Score=244, Evalue=4e-66,
Organism=Escherichia coli, GI1787761, Length=329, Percent_Identity=42.5531914893617, Blast_Score=233, Evalue=1e-62,
Organism=Escherichia coli, GI1787550, Length=269, Percent_Identity=37.9182156133829, Blast_Score=199, Evalue=2e-52,
Organism=Escherichia coli, GI1789888, Length=336, Percent_Identity=33.9285714285714, Blast_Score=199, Evalue=2e-52,
Organism=Escherichia coli, GI1787497, Length=335, Percent_Identity=34.9253731343284, Blast_Score=197, Evalue=8e-52,
Organism=Escherichia coli, GI1788504, Length=376, Percent_Identity=26.8617021276596, Blast_Score=133, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37058; Mature: 37058

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQFILKRLFMVIPTFIAITLITFALVHMIPGDPIEIRMGERGLTPEVHAEMMQKLGLDR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC
PLPEQYFSYVKGVLQGDLGTSFRNNEPVLKEFFTLFPATVELAFFALLWSLILGIFLGVI
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVKKESWISHTVTSLSLTGYSMPIFWWGLILILYFSTPLGLPASGRLPAEYWIEADTGF
HHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEECCCCE
MLIDTWNSDEPGAFLAAIKSLILPSIVLGTIPLAVITRMTRSSMLEVLGEDYIRTAKAKG
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LNTTRIVVVHALRNALIPVVTVVGLIIGQLLSGAVLTENIFSWPGIGKWIIDAINSRDYP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCC
VLQGSVLIIATLIIIVNLTVDVFYGIVNPRIRHT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MFQFILKRLFMVIPTFIAITLITFALVHMIPGDPIEIRMGERGLTPEVHAEMMQKLGLDR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC
PLPEQYFSYVKGVLQGDLGTSFRNNEPVLKEFFTLFPATVELAFFALLWSLILGIFLGVI
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVKKESWISHTVTSLSLTGYSMPIFWWGLILILYFSTPLGLPASGRLPAEYWIEADTGF
HHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEECCCCE
MLIDTWNSDEPGAFLAAIKSLILPSIVLGTIPLAVITRMTRSSMLEVLGEDYIRTAKAKG
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LNTTRIVVVHALRNALIPVVTVVGLIIGQLLSGAVLTENIFSWPGIGKWIIDAINSRDYP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCC
VLQGSVLIIATLIIIVNLTVDVFYGIVNPRIRHT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]