| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is dipZ [H]
Identifier: 15602086
GI number: 15602086
Start: 244510
End: 246270
Strand: Direct
Name: dipZ [H]
Synonym: PM0221
Alternate gene names: 15602086
Gene position: 244510-246270 (Clockwise)
Preceding gene: 15602083
Following gene: 15602087
Centisome position: 10.83
GC content: 39.75
Gene sequence:
>1761_bases ATGTTGTCGTGGAATGACATGGTTTTGCTTATGAAAAAAATATTTTTTATTTTCTTTTTAATTTGGACAAGTTTATCCGT CAATGCGGGCGTATTTGATAAAAAAAACGCCTTTTTGAAAGCGGAACAAGCATTTGTCTTCACAGAAAGCCAGCAGAATG ACAGGTTATCTTTAAATTGGGATATTGCTTCTGGTTATTATCTGTATAAAAAAAGTCTTGAAATAAAAGGGGAGAATGGG CAACTGTTTATCCCTCAACTGCCGTTAGCGGAAATACATCAAGATGATTTTTTTGGTGACGTTGAGATTTATCGTCATCA ATTGACCTTTTCTTTGCCTTTTACTCAGTTATCTGCGACGAAACAAGTTGAAATTACTTATCAAGGCTGCACAGAAGGTT TTTGCTATCCACCTGAAACCCGAGTGATTGCGTTAACCTCGTTAGAGAGGGAATCTGGGCAAATTTCAAGCGCGGTATTG AAAGAAGAGAGTGTACTTTCTGAACTACCATTAGCAGAGCAAGATCGTTTAGCTGCAAAGTTGATCGAGAGTAAATATGC GGTCTTTTGGTTTTTCTTGTTTGGGCTGGGACTCGCTTTTACTCCCTGTGTTTTGCCGATGCTGCCTTTATTGTCAGCTA TTGTCATTGGTCGTGAACAGCGTCCGAGTACAGCCAAAGCGTTCGGATTAAGCGTTGTGTATGTACAAGGGATGGCGTTG ACTTATACCTTGCTTGGTTTAATTGTGGCAGCGATTGGTTTACCTTTTCAAGTGGCATTACAAAGCCCTTATGTCTTATT AACGTTATCCGCGATTTTTGTGTTGCTCGCTTTATCTATGTTTGGGCTATTCACTTTGCAATTACCTGTCAGCTTGCAAA CCAAATTAACCCAATATAGCCAGCAGCAGAAATCAGGGGTATTTGGTGGGGTGTTTGTGATGGGAATGATTGCAGGCTTA GTCGCGTCACCTTGCACCTCTGCACCATTATCCGGCGCATTACTTTATGTGGCGCAAAGTGGTGATTTATTCACCGGTGC GATCACCTTATATTTATTAGCCTTAGGGATGGGCTTACCACTCATTTTTATTACTGTCTTTGGTAATAACATCTTGCCAA AATCAGGTAATTGGATGATTCAAGTGAAAAATGCGTTTGGTTTTGTGTTGTTAGCCTTGCCGATCTTTTTAATTTCGCGT GTGTTTCCTGAAATCGAAATGCCATTATGGTTCAGTTTAGCGTTTGCGTTCTCGCTATGGTTGTTGTATCAATTCAGAAA TAATAAAGGGGTATGGGTATTCACTTTTATCCTTGGTGTAATGGGATATTTATATTATAGCTATGCAATGAACCGACATA CGCCAGCACATCAGACGACTTCTCTGTCTCAATTTGAACGCATTACCAGTTATGCCCAATTACAACAAGTGTTAAGCAAG AATCCTAACTCTCTGGCGATGTTAGATTTATATGCGGATTGGTGTGTTGCCTGTAAAGAGTTTGAAACGCATACCTTTAG CGATGTTGCTGTACAGAAAGCATTTACCGATGTTTTACTTTTACAAGTTGATATGACGAAGAACAGTGAGGCGAATCGGG AACTTATGCAAAAGCTTCACGTCATTGGTTTGCCTACCTTGATTTTCTTTAATCAACAAGGTCAGGAAATTGAAGGCTCA AGAATAACAGGCTTTATGCAAGCCAGCCCTTTTGTGGATTGGTTACAAAAAATGAAGTCTATTCAGCCAATTAGCCAATA A
Upstream 100 bases:
>100_bases TATTTTTTATGGGAAAATAAGTGATCTCAGAATCCGTCACAGAGATAAACGGATTGTAATGTTTGTAATAATATGAAAAA TAAGTCGTTTTTATTATTTT
Downstream 100 bases:
>100_bases GGAAGAGGCTTCCTCTTATCTTTGTGAGCGCTAAAACAATACAGCTTATTTTTATGATGAGAGAAATAAGCTGTTTTTTT ATTGAAAATCGTTACACAAG
Product: thiol:disulfide interchange protein precursor
Products: NA
Alternate protein names: Protein-disulfide reductase; Disulfide reductase [H]
Number of amino acids: Translated: 586; Mature: 586
Protein sequence:
>586_residues MLSWNDMVLLMKKIFFIFFLIWTSLSVNAGVFDKKNAFLKAEQAFVFTESQQNDRLSLNWDIASGYYLYKKSLEIKGENG QLFIPQLPLAEIHQDDFFGDVEIYRHQLTFSLPFTQLSATKQVEITYQGCTEGFCYPPETRVIALTSLERESGQISSAVL KEESVLSELPLAEQDRLAAKLIESKYAVFWFFLFGLGLAFTPCVLPMLPLLSAIVIGREQRPSTAKAFGLSVVYVQGMAL TYTLLGLIVAAIGLPFQVALQSPYVLLTLSAIFVLLALSMFGLFTLQLPVSLQTKLTQYSQQQKSGVFGGVFVMGMIAGL VASPCTSAPLSGALLYVAQSGDLFTGAITLYLLALGMGLPLIFITVFGNNILPKSGNWMIQVKNAFGFVLLALPIFLISR VFPEIEMPLWFSLAFAFSLWLLYQFRNNKGVWVFTFILGVMGYLYYSYAMNRHTPAHQTTSLSQFERITSYAQLQQVLSK NPNSLAMLDLYADWCVACKEFETHTFSDVAVQKAFTDVLLLQVDMTKNSEANRELMQKLHVIGLPTLIFFNQQGQEIEGS RITGFMQASPFVDWLQKMKSIQPISQ
Sequences:
>Translated_586_residues MLSWNDMVLLMKKIFFIFFLIWTSLSVNAGVFDKKNAFLKAEQAFVFTESQQNDRLSLNWDIASGYYLYKKSLEIKGENG QLFIPQLPLAEIHQDDFFGDVEIYRHQLTFSLPFTQLSATKQVEITYQGCTEGFCYPPETRVIALTSLERESGQISSAVL KEESVLSELPLAEQDRLAAKLIESKYAVFWFFLFGLGLAFTPCVLPMLPLLSAIVIGREQRPSTAKAFGLSVVYVQGMAL TYTLLGLIVAAIGLPFQVALQSPYVLLTLSAIFVLLALSMFGLFTLQLPVSLQTKLTQYSQQQKSGVFGGVFVMGMIAGL VASPCTSAPLSGALLYVAQSGDLFTGAITLYLLALGMGLPLIFITVFGNNILPKSGNWMIQVKNAFGFVLLALPIFLISR VFPEIEMPLWFSLAFAFSLWLLYQFRNNKGVWVFTFILGVMGYLYYSYAMNRHTPAHQTTSLSQFERITSYAQLQQVLSK NPNSLAMLDLYADWCVACKEFETHTFSDVAVQKAFTDVLLLQVDMTKNSEANRELMQKLHVIGLPTLIFFNQQGQEIEGS RITGFMQASPFVDWLQKMKSIQPISQ >Mature_586_residues MLSWNDMVLLMKKIFFIFFLIWTSLSVNAGVFDKKNAFLKAEQAFVFTESQQNDRLSLNWDIASGYYLYKKSLEIKGENG QLFIPQLPLAEIHQDDFFGDVEIYRHQLTFSLPFTQLSATKQVEITYQGCTEGFCYPPETRVIALTSLERESGQISSAVL KEESVLSELPLAEQDRLAAKLIESKYAVFWFFLFGLGLAFTPCVLPMLPLLSAIVIGREQRPSTAKAFGLSVVYVQGMAL TYTLLGLIVAAIGLPFQVALQSPYVLLTLSAIFVLLALSMFGLFTLQLPVSLQTKLTQYSQQQKSGVFGGVFVMGMIAGL VASPCTSAPLSGALLYVAQSGDLFTGAITLYLLALGMGLPLIFITVFGNNILPKSGNWMIQVKNAFGFVLLALPIFLISR VFPEIEMPLWFSLAFAFSLWLLYQFRNNKGVWVFTFILGVMGYLYYSYAMNRHTPAHQTTSLSQFERITSYAQLQQVLSK NPNSLAMLDLYADWCVACKEFETHTFSDVAVQKAFTDVLLLQVDMTKNSEANRELMQKLHVIGLPTLIFFNQQGQEIEGS RITGFMQASPFVDWLQKMKSIQPISQ
Specific function: Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a
COG id: COG4232
COG function: function code OC; Thiol:disulfide interchange protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1790578, Length=579, Percent_Identity=48.1865284974093, Blast_Score=515, Evalue=1e-147,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003834 - InterPro: IPR022910 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF02683 DsbD; PF00085 Thioredoxin [H]
EC number: =1.8.1.8 [H]
Molecular weight: Translated: 65670; Mature: 65670
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSWNDMVLLMKKIFFIFFLIWTSLSVNAGVFDKKNAFLKAEQAFVFTESQQNDRLSLNW CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECEEEEEECCCCCCEEEEEE DIASGYYLYKKSLEIKGENGQLFIPQLPLAEIHQDDFFGDVEIYRHQLTFSLPFTQLSAT EECCCEEEEEEEEEEECCCCCEEECCCCHHHHCCCCCCCCHHHEEEEEEEECCHHHHCCC KQVEITYQGCTEGFCYPPETRVIALTSLERESGQISSAVLKEESVLSELPLAEQDRLAAK EEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH LIESKYAVFWFFLFGLGLAFTPCVLPMLPLLSAIVIGREQRPSTAKAFGLSVVYVQGMAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCEEEEEHHHHHH TYTLLGLIVAAIGLPFQVALQSPYVLLTLSAIFVLLALSMFGLFTLQLPVSLQTKLTQYS HHHHHHHHHHHHCCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHH QQQKSGVFGGVFVMGMIAGLVASPCTSAPLSGALLYVAQSGDLFTGAITLYLLALGMGLP HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCC LIFITVFGNNILPKSGNWMIQVKNAFGFVLLALPIFLISRVFPEIEMPLWFSLAFAFSLW EEEHEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LLYQFRNNKGVWVFTFILGVMGYLYYSYAMNRHTPAHQTTSLSQFERITSYAQLQQVLSK HHHHEECCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC NPNSLAMLDLYADWCVACKEFETHTFSDVAVQKAFTDVLLLQVDMTKNSEANRELMQKLH CCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHH VIGLPTLIFFNQQGQEIEGSRITGFMQASPFVDWLQKMKSIQPISQ HHCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLSWNDMVLLMKKIFFIFFLIWTSLSVNAGVFDKKNAFLKAEQAFVFTESQQNDRLSLNW CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECEEEEEECCCCCCEEEEEE DIASGYYLYKKSLEIKGENGQLFIPQLPLAEIHQDDFFGDVEIYRHQLTFSLPFTQLSAT EECCCEEEEEEEEEEECCCCCEEECCCCHHHHCCCCCCCCHHHEEEEEEEECCHHHHCCC KQVEITYQGCTEGFCYPPETRVIALTSLERESGQISSAVLKEESVLSELPLAEQDRLAAK EEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH LIESKYAVFWFFLFGLGLAFTPCVLPMLPLLSAIVIGREQRPSTAKAFGLSVVYVQGMAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCEEEEEHHHHHH TYTLLGLIVAAIGLPFQVALQSPYVLLTLSAIFVLLALSMFGLFTLQLPVSLQTKLTQYS HHHHHHHHHHHHCCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHH QQQKSGVFGGVFVMGMIAGLVASPCTSAPLSGALLYVAQSGDLFTGAITLYLLALGMGLP HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCC LIFITVFGNNILPKSGNWMIQVKNAFGFVLLALPIFLISRVFPEIEMPLWFSLAFAFSLW EEEHEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LLYQFRNNKGVWVFTFILGVMGYLYYSYAMNRHTPAHQTTSLSQFERITSYAQLQQVLSK HHHHEECCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC NPNSLAMLDLYADWCVACKEFETHTFSDVAVQKAFTDVLLLQVDMTKNSEANRELMQKLH CCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHH VIGLPTLIFFNQQGQEIEGSRITGFMQASPFVDWLQKMKSIQPISQ HHCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]