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The map label for this gene is yrbB [C]

Identifier: 15602043

GI number: 15602043

Start: 201488

End: 201865

Strand: Direct

Name: yrbB [C]

Synonym: PM0178

Alternate gene names: 15602043

Gene position: 201488-201865 (Clockwise)

Preceding gene: 15602042

Following gene: 15602044

Centisome position: 8.93

GC content: 40.74

Gene sequence:

>378_bases
ATGAAAACGGATAAAAGTTTAACTTGGGCAAGCGAACAAAATAATGATAAGATAACGCTCCGATTAGCCGGAGAGTTATC
TCGTGACACGTTGCTACCGCTATGGTCGCAGCGTGCTTCTTTTTTGCCTGAAGAAAAGAGCCAGGTACAAACCTTATACT
GGGATTTGACAGATGTCGCGAGAGTAGATTCGGCAGGATTTGCTTTATTGTGTGATTTTATTAGGCATTGCCAGAAAGTG
ATGAAGCAAGAGACAAGTATTATTTTACATAATGCACCGCGCCAATTATTGACATTGGCGGATTTATTTGGGCTATCTGA
CTGGATAGCAACATTTGTTCAATCCGACGGAAATGATAAATGGAAACGCAAGAAATAG

Upstream 100 bases:

>100_bases
AAAGAATGGTCGCCAACGATTGTAAAAAGTGGTCTTGATGCACTGACAGAACAAGTGGAAAAAGCGGCTAAAACACCGGT
CAGCCTAAATAAGTAATCGC

Downstream 100 bases:

>100_bases
AACGAATTTTAAAAGACGCCTTAAAGCTAGATGAAGTGTATGTACAAGGCGAAAATGCACACTATGGTGTAATTGCTGTG
AGCGATGAATTTGCGGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKTDKSLTWASEQNNDKITLRLAGELSRDTLLPLWSQRASFLPEEKSQVQTLYWDLTDVARVDSAGFALLCDFIRHCQKV
MKQETSIILHNAPRQLLTLADLFGLSDWIATFVQSDGNDKWKRKK

Sequences:

>Translated_125_residues
MKTDKSLTWASEQNNDKITLRLAGELSRDTLLPLWSQRASFLPEEKSQVQTLYWDLTDVARVDSAGFALLCDFIRHCQKV
MKQETSIILHNAPRQLLTLADLFGLSDWIATFVQSDGNDKWKRKK
>Mature_125_residues
MKTDKSLTWASEQNNDKITLRLAGELSRDTLLPLWSQRASFLPEEKSQVQTLYWDLTDVARVDSAGFALLCDFIRHCQKV
MKQETSIILHNAPRQLLTLADLFGLSDWIATFVQSDGNDKWKRKK

Specific function: Unknown

COG id: COG3113

COG function: function code R; Predicted NTP binding protein (contains STAS domain)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645 [H]

Pfam domain/function: PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 14398; Mature: 14398

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTDKSLTWASEQNNDKITLRLAGELSRDTLLPLWSQRASFLPEEKSQVQTLYWDLTDVA
CCCCCCCEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
RVDSAGFALLCDFIRHCQKVMKQETSIILHNAPRQLLTLADLFGLSDWIATFVQSDGNDK
HHCCCCHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
WKRKK
CCCCC
>Mature Secondary Structure
MKTDKSLTWASEQNNDKITLRLAGELSRDTLLPLWSQRASFLPEEKSQVQTLYWDLTDVA
CCCCCCCEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
RVDSAGFALLCDFIRHCQKVMKQETSIILHNAPRQLLTLADLFGLSDWIATFVQSDGNDK
HHCCCCHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
WKRKK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]