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The map label for this gene is yrbC [C]

Identifier: 15602042

GI number: 15602042

Start: 200845

End: 201483

Strand: Direct

Name: yrbC [C]

Synonym: PM0177

Alternate gene names: 15602042

Gene position: 200845-201483 (Clockwise)

Preceding gene: 15602041

Following gene: 15602043

Centisome position: 8.9

GC content: 38.5

Gene sequence:

>639_bases
ATGTTAACCATGTTGAAAAAAATGCTAGCAAAAATGGTCGTGATAGCGACCGCACTTGTTTCTATGCATGCCTTTGCTGC
GGATACCCCCTATGATTTAACGGTCGAAGTGTCGGATAAATTATTTAAAAATATCACTAGCAATCAAGCGAAAATTAAGC
AAGATCCGAATTATTTAAAAACGATTGTACGTGCAGAACTGATGCCTTATGTACATGTGAAATATGCCGGTTCAAAAGTG
TTAGGGAAAAATTTTAAAACCACTACACCAGAGCAAAGAGAAAAATTCTTTACGGCGTTTGAGCAATATATCGAGCAAAC
TTATGCTCAAGTCCTTACCCTGTATTCTGATCAAAAATTAGAAATTGAAAAACCGAAAACGGATGCAACAGAGAAAACCG
CCAGTATCCGTGTGAAAGTGATTCAAACAGGTAATCAGCCGCCAGTAAATTTGACGTTCTACTGGTACAAAAACAGTAAA
ACAGGCAAATGGCAAGTCTTTGATATGAGTGCAGAAGGCGTGAGTATGGTAGAAACCAAAGAAAAAGAATGGTCGCCAAC
GATTGTAAAAAGTGGTCTTGATGCACTGACAGAACAAGTGGAAAAAGCGGCTAAAACACCGGTCAGCCTAAATAAGTAA

Upstream 100 bases:

>100_bases
ATGGTGATCGTAATAAAAACGATCGCCAAGAAGAGGGTGAACCAAAAGCGCAGTAGCGTATGATAAGAAATTTAGGAATG
TAATTGAGTAGGAGAATGTT

Downstream 100 bases:

>100_bases
TCGCATGAAAACGGATAAAAGTTTAACTTGGGCAAGCGAACAAAATAATGATAAGATAACGCTCCGATTAGCCGGAGAGT
TATCTCGTGACACGTTGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MLTMLKKMLAKMVVIATALVSMHAFAADTPYDLTVEVSDKLFKNITSNQAKIKQDPNYLKTIVRAELMPYVHVKYAGSKV
LGKNFKTTTPEQREKFFTAFEQYIEQTYAQVLTLYSDQKLEIEKPKTDATEKTASIRVKVIQTGNQPPVNLTFYWYKNSK
TGKWQVFDMSAEGVSMVETKEKEWSPTIVKSGLDALTEQVEKAAKTPVSLNK

Sequences:

>Translated_212_residues
MLTMLKKMLAKMVVIATALVSMHAFAADTPYDLTVEVSDKLFKNITSNQAKIKQDPNYLKTIVRAELMPYVHVKYAGSKV
LGKNFKTTTPEQREKFFTAFEQYIEQTYAQVLTLYSDQKLEIEKPKTDATEKTASIRVKVIQTGNQPPVNLTFYWYKNSK
TGKWQVFDMSAEGVSMVETKEKEWSPTIVKSGLDALTEQVEKAAKTPVSLNK
>Mature_212_residues
MLTMLKKMLAKMVVIATALVSMHAFAADTPYDLTVEVSDKLFKNITSNQAKIKQDPNYLKTIVRAELMPYVHVKYAGSKV
LGKNFKTTTPEQREKFFTAFEQYIEQTYAQVLTLYSDQKLEIEKPKTDATEKTASIRVKVIQTGNQPPVNLTFYWYKNSK
TGKWQVFDMSAEGVSMVETKEKEWSPTIVKSGLDALTEQVEKAAKTPVSLNK

Specific function: Unknown

COG id: COG2854

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaC/ttg2D family [H]

Homologues:

Organism=Escherichia coli, GI1789583, Length=209, Percent_Identity=41.6267942583732, Blast_Score=181, Evalue=3e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023094
- InterPro:   IPR008869 [H]

Pfam domain/function: PF05494 Tol_Tol_Ttg2 [H]

EC number: NA

Molecular weight: Translated: 24062; Mature: 24062

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTMLKKMLAKMVVIATALVSMHAFAADTPYDLTVEVSDKLFKNITSNQAKIKQDPNYLK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCCCHHCCCCHHHHH
TIVRAELMPYVHVKYAGSKVLGKNFKTTTPEQREKFFTAFEQYIEQTYAQVLTLYSDQKL
HHHHHHHCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
EIEKPKTDATEKTASIRVKVIQTGNQPPVNLTFYWYKNSKTGKWQVFDMSAEGVSMVETK
EEECCCCCCCCHHHEEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEECCCCCHHHHCC
EKEWSPTIVKSGLDALTEQVEKAAKTPVSLNK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLTMLKKMLAKMVVIATALVSMHAFAADTPYDLTVEVSDKLFKNITSNQAKIKQDPNYLK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCCCHHCCCCHHHHH
TIVRAELMPYVHVKYAGSKVLGKNFKTTTPEQREKFFTAFEQYIEQTYAQVLTLYSDQKL
HHHHHHHCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
EIEKPKTDATEKTASIRVKVIQTGNQPPVNLTFYWYKNSKTGKWQVFDMSAEGVSMVETK
EEECCCCCCCCHHHEEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEECCCCCHHHHCC
EKEWSPTIVKSGLDALTEQVEKAAKTPVSLNK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]