| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is yjiY [C]
Identifier: 15601997
GI number: 15601997
Start: 156093
End: 157637
Strand: Direct
Name: yjiY [C]
Synonym: PM0132
Alternate gene names: 15601997
Gene position: 156093-157637 (Clockwise)
Preceding gene: 15601991
Following gene: 15601998
Centisome position: 6.91
GC content: 39.61
Gene sequence:
>1545_bases ATGTTATGGTTCTTCTTTTGCGTTGCAATATTAGTTTTGGGCTATTTTGTATACGGCAAATTTATTGAAAAGATCTTTGT GATCAACCCAAAAAAAGCAACACCCGCTTATACAATGAACGATGGTGTTGACTACATGCCAATGTCAACTAAAAAGATTT GGTTGATTCAATTATTAAACATTGCAGGAACAGGACCAATCTTTGGACCAATTCTCGGTGCTTTATATGGACCAGTCGCA ATGTTATGGATTGTGATCGGTTGTATTTTTGCCGGTGCAGTGCATGATTACTTCTGTGGTATGTTAAGTGTGCGTAATGG GGGCGCGTCAATGCCAACATTAGCAGGTCGTTATTTAGGCGCACCAGTGAAAGCCTTTATTAATATGCTTGCGGTAGTGT TATTACTTCTCGTTGGTGTGGTTTTCGTTGCTAGCCCAGCAAAATTATTAAGTACTATTACCATGGATAATTTGGGTGTC GTAGAGAGCGCAGGGGCGGCTGCAACCGTATTTGGTTATGATGCTGCTACCGTCTTAGTGATTTGGACAACCATTATTTT TGTTTACTACATCATCGCAACTTTATTACCGATTGATAAAATTATCGGTCGTATCTATCCGCTATTCGGTGCTTTATTAC TGTTCATGACATTCGGTATGATGTTTGGCTTAGTCAGCAGTCATTTAAATAGTAATGAGCCAATCGAGTTTTTCCGTACA GTCGGTGGATTAGAAGTGGGTAAATTCTTTGAGAATTTACAACCAAAAGGTGATTTACCAATTTGGCCATTATTATTCTT AACTATCTCTTGTGGTGCATTATCTGGTTTCCATGCGACGCAATCGCCATTAATGGCACGTTGTGCACAAAATGAAAAAG AAGGTCGTTTCATTTTCTATGGTGCGATGATTGCTGAAGGGGTGATTGCTTTAGTTTGGTGTGCAGTAGGATTAAGTTTC TATCAAGACCCAACAGAATTACAAGCTGCGATTGCAGCCGGTTCACCGTCAAAAGTTGTATATGATTCTTCAATCTACTT CCTCGGTGCTGTGGGTGGTGTATTTGCAATTCTTGGTGTGGTGGTATTACCAATTACCTCTGGCGATACCGCATTCCGTG CAGCACGTTTAATCATTGCTGAGTTCTTTAAATTTGAGCAAAAAACATTGGTGAAACGTTTAGTGATTGCTGTTCCATTG TTTGTGTTAGGGTTCATTGTATCGAAAATTGACTTCAGCGTATTGTGGCGTTATTTCAGCTGGGCAAACCAAACGACAGC AATGGTGATGTTATGGACTGCCGCAGCGTATTTATTCCGTTACGGTAAATTCCACTGGGTTTGTACGCTTCCAGCAATGT TCATCAGTACCGTTTGTTTCACTTACTTAGCGTATAACAAGATCGGTTTCAATTTAGACTATCAACTTTCTGTTTATATT GGTATTGGTTTAACCGTGTTCTGTACTGTCTTGTTCTTTACGTTATTAAAACCAATTGCTAAAGGTGATCCTGATGCCTT GGTTGACGATTTAGTCAAACAATAA
Upstream 100 bases:
>100_bases TTGCTTGTTTACTTAATAATTACAACTGCAATAAAATACGCACGGCTTTTGCATGAAAAAGTTGTCTAAATATTTAATCT ACTAAGATAGGTACTCTATT
Downstream 100 bases:
>100_bases TCTCGTTTTTTATCTCATCCGATGCCCTGTTGATCGTTGATTGATAGGGCATTTTTGTTTCTGCTGTTTAGTCTTTTCGT TTTTTATGATGAAACTCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MLWFFFCVAILVLGYFVYGKFIEKIFVINPKKATPAYTMNDGVDYMPMSTKKIWLIQLLNIAGTGPIFGPILGALYGPVA MLWIVIGCIFAGAVHDYFCGMLSVRNGGASMPTLAGRYLGAPVKAFINMLAVVLLLLVGVVFVASPAKLLSTITMDNLGV VESAGAAATVFGYDAATVLVIWTTIIFVYYIIATLLPIDKIIGRIYPLFGALLLFMTFGMMFGLVSSHLNSNEPIEFFRT VGGLEVGKFFENLQPKGDLPIWPLLFLTISCGALSGFHATQSPLMARCAQNEKEGRFIFYGAMIAEGVIALVWCAVGLSF YQDPTELQAAIAAGSPSKVVYDSSIYFLGAVGGVFAILGVVVLPITSGDTAFRAARLIIAEFFKFEQKTLVKRLVIAVPL FVLGFIVSKIDFSVLWRYFSWANQTTAMVMLWTAAAYLFRYGKFHWVCTLPAMFISTVCFTYLAYNKIGFNLDYQLSVYI GIGLTVFCTVLFFTLLKPIAKGDPDALVDDLVKQ
Sequences:
>Translated_514_residues MLWFFFCVAILVLGYFVYGKFIEKIFVINPKKATPAYTMNDGVDYMPMSTKKIWLIQLLNIAGTGPIFGPILGALYGPVA MLWIVIGCIFAGAVHDYFCGMLSVRNGGASMPTLAGRYLGAPVKAFINMLAVVLLLLVGVVFVASPAKLLSTITMDNLGV VESAGAAATVFGYDAATVLVIWTTIIFVYYIIATLLPIDKIIGRIYPLFGALLLFMTFGMMFGLVSSHLNSNEPIEFFRT VGGLEVGKFFENLQPKGDLPIWPLLFLTISCGALSGFHATQSPLMARCAQNEKEGRFIFYGAMIAEGVIALVWCAVGLSF YQDPTELQAAIAAGSPSKVVYDSSIYFLGAVGGVFAILGVVVLPITSGDTAFRAARLIIAEFFKFEQKTLVKRLVIAVPL FVLGFIVSKIDFSVLWRYFSWANQTTAMVMLWTAAAYLFRYGKFHWVCTLPAMFISTVCFTYLAYNKIGFNLDYQLSVYI GIGLTVFCTVLFFTLLKPIAKGDPDALVDDLVKQ >Mature_514_residues MLWFFFCVAILVLGYFVYGKFIEKIFVINPKKATPAYTMNDGVDYMPMSTKKIWLIQLLNIAGTGPIFGPILGALYGPVA MLWIVIGCIFAGAVHDYFCGMLSVRNGGASMPTLAGRYLGAPVKAFINMLAVVLLLLVGVVFVASPAKLLSTITMDNLGV VESAGAAATVFGYDAATVLVIWTTIIFVYYIIATLLPIDKIIGRIYPLFGALLLFMTFGMMFGLVSSHLNSNEPIEFFRT VGGLEVGKFFENLQPKGDLPIWPLLFLTISCGALSGFHATQSPLMARCAQNEKEGRFIFYGAMIAEGVIALVWCAVGLSF YQDPTELQAAIAAGSPSKVVYDSSIYFLGAVGGVFAILGVVVLPITSGDTAFRAARLIIAEFFKFEQKTLVKRLVIAVPL FVLGFIVSKIDFSVLWRYFSWANQTTAMVMLWTAAAYLFRYGKFHWVCTLPAMFISTVCFTYLAYNKIGFNLDYQLSVYI GIGLTVFCTVLFFTLLKPIAKGDPDALVDDLVKQ
Specific function: Unknown
COG id: COG1966
COG function: function code T; Carbon starvation protein, predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CstA family [H]
Homologues:
Organism=Escherichia coli, GI87082431, Length=349, Percent_Identity=30.0859598853868, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI1786814, Length=584, Percent_Identity=24.3150684931507, Blast_Score=102, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003706 [H]
Pfam domain/function: PF02554 CstA [H]
EC number: NA
Molecular weight: Translated: 56334; Mature: 56334
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWFFFCVAILVLGYFVYGKFIEKIFVINPKKATPAYTMNDGVDYMPMSTKKIWLIQLLN CHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEECCCCCCCCCCCCHHHHHHHHH IAGTGPIFGPILGALYGPVAMLWIVIGCIFAGAVHDYFCGMLSVRNGGASMPTLAGRYLG HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC APVKAFINMLAVVLLLLVGVVFVASPAKLLSTITMDNLGVVESAGAAATVFGYDAATVLV CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHH IWTTIIFVYYIIATLLPIDKIIGRIYPLFGALLLFMTFGMMFGLVSSHLNSNEPIEFFRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VGGLEVGKFFENLQPKGDLPIWPLLFLTISCGALSGFHATQSPLMARCAQNEKEGRFIFY HCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEE GAMIAEGVIALVWCAVGLSFYQDPTELQAAIAAGSPSKVVYDSSIYFLGAVGGVFAILGV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHH VVLPITSGDTAFRAARLIIAEFFKFEQKTLVKRLVIAVPLFVLGFIVSKIDFSVLWRYFS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WANQTTAMVMLWTAAAYLFRYGKFHWVCTLPAMFISTVCFTYLAYNKIGFNLDYQLSVYI HCCCHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE GIGLTVFCTVLFFTLLKPIAKGDPDALVDDLVKQ CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure MLWFFFCVAILVLGYFVYGKFIEKIFVINPKKATPAYTMNDGVDYMPMSTKKIWLIQLLN CHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEECCCCCCCCCCCCHHHHHHHHH IAGTGPIFGPILGALYGPVAMLWIVIGCIFAGAVHDYFCGMLSVRNGGASMPTLAGRYLG HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC APVKAFINMLAVVLLLLVGVVFVASPAKLLSTITMDNLGVVESAGAAATVFGYDAATVLV CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHH IWTTIIFVYYIIATLLPIDKIIGRIYPLFGALLLFMTFGMMFGLVSSHLNSNEPIEFFRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VGGLEVGKFFENLQPKGDLPIWPLLFLTISCGALSGFHATQSPLMARCAQNEKEGRFIFY HCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEE GAMIAEGVIALVWCAVGLSFYQDPTELQAAIAAGSPSKVVYDSSIYFLGAVGGVFAILGV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHH VVLPITSGDTAFRAARLIIAEFFKFEQKTLVKRLVIAVPLFVLGFIVSKIDFSVLWRYFS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WANQTTAMVMLWTAAAYLFRYGKFHWVCTLPAMFISTVCFTYLAYNKIGFNLDYQLSVYI HCCCHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE GIGLTVFCTVLFFTLLKPIAKGDPDALVDDLVKQ CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]