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The map label for this gene is yaaJ [C]

Identifier: 15601956

GI number: 15601956

Start: 116288

End: 117661

Strand: Direct

Name: yaaJ [C]

Synonym: PM0091

Alternate gene names: 15601956

Gene position: 116288-117661 (Clockwise)

Preceding gene: 15601955

Following gene: 15601957

Centisome position: 5.15

GC content: 42.5

Gene sequence:

>1374_bases
ATGTCATTAGAATCAACTTTATCATCAATTAATAGTTTTATTTGGGGTCCACCTCTACTGCTTTTGCTTTCTGGTACAGG
GCTTTATTTAACATTCCGTTTAGGTTTTATCCAGTTTATCCAGTTGCCTCGTGCATTATCTTATCTTTTTAGAAAAGAAA
AGGGTGCCGCTAAAAAAGGTGATGTGTCTTCTTTTGCGGCACTTTGTACAGCATTAGCGGCGACGATTGGTACAGGGAAT
ATTGTTGGGGTGGCAACCGCGGTACAAGCTGGTGGACCGGGTGCGGTTTTTTGGATGTGGATTGTTGCGTTATTAGGGAT
GGCGACAAAATATGCAGAATGTTTGTTGGCAGTAAAATATCGTGTTCGTGATAAACAAGGTTTTATGGCGGGTGGTCCAA
TGTACTACATTGAGCGTGGTCTTGGGATCAAATGGTTAGCGAAACTTTTTGCGCTATTTGGTATTTTAGTTGCATTTTTT
GGCATTGGAACCTTTCCACAAATTAATGCGATTACTCATGCCATGCAGGATACCTTTAGCGTGCCAATCCCGTTAACTGC
CTCCATTATTACGGCATTAGTTGCACTGATCATCCTGGGGGGCGTAAGACGTATCGCGATTGTTTCTTCTTATGTCGTGC
CTTTCATGGCTGTTCTTTATGTGTTGACCTCGTTAATTATTTTAGCGATAAACTGGCAAGTGGTACCACAAGCGATTGGA
CTGATTATTTATAGTGCTTTTAATCCCACTGCTGCGTTAGGCGGTGCGCTAGGTTATACCGTGATGAAAGCCATTCAATC
AGGTGTAGCACGCGGTATCTTCTCGAATGAATCGGGGTTAGGAAGTGCACCTATTGCCGCGGCTGCCGCACAAACCAAGG
AACCCGTGCGACAAGGGCTGATTTCGATGACGGGGACGTTTTTAGACACAATTGTTGTGTGTTCGATGACTGGTATTGTG
TTAGTGATCACAGGCGCATGGCAATCGACAGAGATAGCAGGTGCAGCATTAACCAATCATGCCTTTTCAACGGGATTGGG
CTCTAATTTAGGCGGTACGATTGTTACCGTAGGATTGTTGTTCTTTGCATTTACCACAATTTTAGGTTGGTGCTATTACG
GTGAACGTTGTTTTGTGTATTTGGTTGGTACGAGTAAACTTAAAGCGTATCGTTTTATATTCATTGTGTTAGTTGGATGT
GGCGCATTTATTCATTTAGATGTCATTTGGATTCTTGCTGATATTGTTAATGGTTTGATGGCACTGCCAAATTTAGTGGC
GTTAATTGGTTTACGTCATGTCATTGTGAGTGAAACGGAAGCGTATTTTTCGCGTTTGAAATTGCAGCAAACAGATGCAG
ATGAAACTGCTTAA

Upstream 100 bases:

>100_bases
TTTACATGCATGGACTACATGCGTGCTTTTCTCTTTTTTAACTCTTCCGCAAAATGCTTTTGCCTCCTTGTAATCTGTGA
TTTTTTACGAGGATCTTATC

Downstream 100 bases:

>100_bases
TTTGTTGAAATATAAGTATAAAATGATGAGAGGGGAGACGATGGAATCCCCTCAATCATATCAACTTTGAGTGAATAATC
CAGTACTAAATCACAATTTT

Product: hypothetical protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MSLESTLSSINSFIWGPPLLLLLSGTGLYLTFRLGFIQFIQLPRALSYLFRKEKGAAKKGDVSSFAALCTALAATIGTGN
IVGVATAVQAGGPGAVFWMWIVALLGMATKYAECLLAVKYRVRDKQGFMAGGPMYYIERGLGIKWLAKLFALFGILVAFF
GIGTFPQINAITHAMQDTFSVPIPLTASIITALVALIILGGVRRIAIVSSYVVPFMAVLYVLTSLIILAINWQVVPQAIG
LIIYSAFNPTAALGGALGYTVMKAIQSGVARGIFSNESGLGSAPIAAAAAQTKEPVRQGLISMTGTFLDTIVVCSMTGIV
LVITGAWQSTEIAGAALTNHAFSTGLGSNLGGTIVTVGLLFFAFTTILGWCYYGERCFVYLVGTSKLKAYRFIFIVLVGC
GAFIHLDVIWILADIVNGLMALPNLVALIGLRHVIVSETEAYFSRLKLQQTDADETA

Sequences:

>Translated_457_residues
MSLESTLSSINSFIWGPPLLLLLSGTGLYLTFRLGFIQFIQLPRALSYLFRKEKGAAKKGDVSSFAALCTALAATIGTGN
IVGVATAVQAGGPGAVFWMWIVALLGMATKYAECLLAVKYRVRDKQGFMAGGPMYYIERGLGIKWLAKLFALFGILVAFF
GIGTFPQINAITHAMQDTFSVPIPLTASIITALVALIILGGVRRIAIVSSYVVPFMAVLYVLTSLIILAINWQVVPQAIG
LIIYSAFNPTAALGGALGYTVMKAIQSGVARGIFSNESGLGSAPIAAAAAQTKEPVRQGLISMTGTFLDTIVVCSMTGIV
LVITGAWQSTEIAGAALTNHAFSTGLGSNLGGTIVTVGLLFFAFTTILGWCYYGERCFVYLVGTSKLKAYRFIFIVLVGC
GAFIHLDVIWILADIVNGLMALPNLVALIGLRHVIVSETEAYFSRLKLQQTDADETA
>Mature_456_residues
SLESTLSSINSFIWGPPLLLLLSGTGLYLTFRLGFIQFIQLPRALSYLFRKEKGAAKKGDVSSFAALCTALAATIGTGNI
VGVATAVQAGGPGAVFWMWIVALLGMATKYAECLLAVKYRVRDKQGFMAGGPMYYIERGLGIKWLAKLFALFGILVAFFG
IGTFPQINAITHAMQDTFSVPIPLTASIITALVALIILGGVRRIAIVSSYVVPFMAVLYVLTSLIILAINWQVVPQAIGL
IIYSAFNPTAALGGALGYTVMKAIQSGVARGIFSNESGLGSAPIAAAAAQTKEPVRQGLISMTGTFLDTIVVCSMTGIVL
VITGAWQSTEIAGAALTNHAFSTGLGSNLGGTIVTVGLLFFAFTTILGWCYYGERCFVYLVGTSKLKAYRFIFIVLVGCG
AFIHLDVIWILADIVNGLMALPNLVALIGLRHVIVSETEAYFSRLKLQQTDADETA

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=452, Percent_Identity=38.9380530973451, Blast_Score=268, Evalue=4e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 48589; Mature: 48458

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLESTLSSINSFIWGPPLLLLLSGTGLYLTFRLGFIQFIQLPRALSYLFRKEKGAAKKG
CCHHHHHHHHHHHHCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DVSSFAALCTALAATIGTGNIVGVATAVQAGGPGAVFWMWIVALLGMATKYAECLLAVKY
CHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVRDKQGFMAGGPMYYIERGLGIKWLAKLFALFGILVAFFGIGTFPQINAITHAMQDTFS
HHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
VPIPLTASIITALVALIILGGVRRIAIVSSYVVPFMAVLYVLTSLIILAINWQVVPQAIG
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
LIIYSAFNPTAALGGALGYTVMKAIQSGVARGIFSNESGLGSAPIAAAAAQTKEPVRQGL
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ISMTGTFLDTIVVCSMTGIVLVITGAWQSTEIAGAALTNHAFSTGLGSNLGGTIVTVGLL
HHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
FFAFTTILGWCYYGERCFVYLVGTSKLKAYRFIFIVLVGCGAFIHLDVIWILADIVNGLM
HHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALPNLVALIGLRHVIVSETEAYFSRLKLQQTDADETA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SLESTLSSINSFIWGPPLLLLLSGTGLYLTFRLGFIQFIQLPRALSYLFRKEKGAAKKG
CHHHHHHHHHHHHCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DVSSFAALCTALAATIGTGNIVGVATAVQAGGPGAVFWMWIVALLGMATKYAECLLAVKY
CHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVRDKQGFMAGGPMYYIERGLGIKWLAKLFALFGILVAFFGIGTFPQINAITHAMQDTFS
HHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
VPIPLTASIITALVALIILGGVRRIAIVSSYVVPFMAVLYVLTSLIILAINWQVVPQAIG
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
LIIYSAFNPTAALGGALGYTVMKAIQSGVARGIFSNESGLGSAPIAAAAAQTKEPVRQGL
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ISMTGTFLDTIVVCSMTGIVLVITGAWQSTEIAGAALTNHAFSTGLGSNLGGTIVTVGLL
HHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
FFAFTTILGWCYYGERCFVYLVGTSKLKAYRFIFIVLVGCGAFIHLDVIWILADIVNGLM
HHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALPNLVALIGLRHVIVSETEAYFSRLKLQQTDADETA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]