| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
Click here to switch to the map view.
The map label for this gene is 15601932
Identifier: 15601932
GI number: 15601932
Start: 93488
End: 94069
Strand: Direct
Name: 15601932
Synonym: PM0067
Alternate gene names: NA
Gene position: 93488-94069 (Clockwise)
Preceding gene: 15601931
Following gene: 15601933
Centisome position: 4.14
GC content: 38.14
Gene sequence:
>582_bases ATGTGGCGGAATAGTATGCAAAAAATTCTCTTCATATTAACTGCACTGATTGGGCTGTTACTTTCAGGCTGTGCCAGCAA ACCGCAATTAGTGGCACCGCAGCAGATTACCCATAATCAACACACCTATACTTTAGCCACGCAACAAGATTTGGGGAATC TTGCCCGTTTCTTTTATTTAGAAGAAGGGGAAAGTGTAGAAAATTGGAAAAGTGCGGTGGAATTGTTATTTGATCGTAAT CCCATGCAAGTCAGCTTAGATGATCGTATCGCATTGCGTCAACGTGTCTATAAAAATACTGGGGTCAAACATTTTAAATT ACAGCAACAACAGGAAACTCTGTATTCTTTTGTCATCTATGAACCGACAGTGAAAAATAATGATTGGCAAGTCGATGTCG CAAAAGGAAAAAGCATTGTGGGCTGTGGATTTGTGCAATACCAATATTCATTAAAAATTCCGAAAAGCAAAAAATTGCGC CACATGAAAAATGAAAAAGTGATTCGTTATTTGAAAAAGTATGTAGTAGAGAAAGAAATGAAGCACATTAAACAAGTGGC TTGGCAATGGATGTGTGCATAG
Upstream 100 bases:
>100_bases AATCGTTTAAGCGAGGTGGAACAATTAAAAGGGTTTGATTTAGGCGGGTATTGGTTTGATCCAACGAGTTCAAGTGAAAC CGAGTTCGTATTTAAACGTG
Downstream 100 bases:
>100_bases ATGGAAGAAAAAAGCTATTCTTCACAAGTGAAAAAAGCGGCAAATTGTGCGGTCTATACTGCTTTAATGTTGATTCTGGT GAAGGGATTTGCATGGTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MWRNSMQKILFILTALIGLLLSGCASKPQLVAPQQITHNQHTYTLATQQDLGNLARFFYLEEGESVENWKSAVELLFDRN PMQVSLDDRIALRQRVYKNTGVKHFKLQQQQETLYSFVIYEPTVKNNDWQVDVAKGKSIVGCGFVQYQYSLKIPKSKKLR HMKNEKVIRYLKKYVVEKEMKHIKQVAWQWMCA
Sequences:
>Translated_193_residues MWRNSMQKILFILTALIGLLLSGCASKPQLVAPQQITHNQHTYTLATQQDLGNLARFFYLEEGESVENWKSAVELLFDRN PMQVSLDDRIALRQRVYKNTGVKHFKLQQQQETLYSFVIYEPTVKNNDWQVDVAKGKSIVGCGFVQYQYSLKIPKSKKLR HMKNEKVIRYLKKYVVEKEMKHIKQVAWQWMCA >Mature_193_residues MWRNSMQKILFILTALIGLLLSGCASKPQLVAPQQITHNQHTYTLATQQDLGNLARFFYLEEGESVENWKSAVELLFDRN PMQVSLDDRIALRQRVYKNTGVKHFKLQQQQETLYSFVIYEPTVKNNDWQVDVAKGKSIVGCGFVQYQYSLKIPKSKKLR HMKNEKVIRYLKKYVVEKEMKHIKQVAWQWMCA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22672; Mature: 22672
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWRNSMQKILFILTALIGLLLSGCASKPQLVAPQQITHNQHTYTLATQQDLGNLARFFYL CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHCCCCCEEEEECHHHHHHHHHHHHC EEGESVENWKSAVELLFDRNPMQVSLDDRIALRQRVYKNTGVKHFKLQQQQETLYSFVIY CCCCCHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEE EPTVKNNDWQVDVAKGKSIVGCGFVQYQYSLKIPKSKKLRHMKNEKVIRYLKKYVVEKEM CCCCCCCCEEEECCCCCEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH KHIKQVAWQWMCA HHHHHHHHHHCCC >Mature Secondary Structure MWRNSMQKILFILTALIGLLLSGCASKPQLVAPQQITHNQHTYTLATQQDLGNLARFFYL CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHCCCCCEEEEECHHHHHHHHHHHHC EEGESVENWKSAVELLFDRNPMQVSLDDRIALRQRVYKNTGVKHFKLQQQQETLYSFVIY CCCCCHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEE EPTVKNNDWQVDVAKGKSIVGCGFVQYQYSLKIPKSKKLRHMKNEKVIRYLKKYVVEKEM CCCCCCCCEEEECCCCCEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH KHIKQVAWQWMCA HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7768823; 7542800 [H]