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The map label for this gene is ymbH

Identifier: 30024026

GI number: 30024026

Start: 1215335

End: 1216084

Strand: Direct

Name: ymbH

Synonym: L200048

Alternate gene names: NA

Gene position: 1215335-1216084 (Clockwise)

Preceding gene: 15673175

Following gene: 15673179

Centisome position: 51.38

GC content: 30.13

Gene sequence:

>750_bases
ATGATAACCTTTTTGATAACTAGTATCGGTGTTTTCGCTATTTATATTATTTCCATAATTATTTCAAAACTCATCTTTTC
TAAAGTAAAGGATAAAAACTTACAACGAACTTTAAAATATGGAAGTGTATACCCAAATTCAGGATTCATGGGAATTCCAT
TAGCTCAGGCACTTTTTGGAAGCCATGGTGTATTTTTTAGTGTTATCTCAGTTTTAGCTTTTAACATATTTTCTTGGAGC
CATGGTGTAAGTCTATTTAACGAGCAAAAAGGTTGGAAAGAGTTATCACGTGATATTTTGGTGAATCCCAATATTATAGC
TATTTTACTAGGGATTTTTGTATTTGTTTTTTCAATACCTATCCCTAACGTAGTTAACCAATTACTAGATTATATAGCTG
CGATGTTTGCACCTCTGTCCATGATTATAATAGGTTGTAGTTTAGCAGATATTCAGTTAAAAGCTTTAAGTTTTAATCGA
TTATTAATTTTAGCTATCCTTTTGAAAAATTTTATATACCCAATTTTTTCTATATTTATTTTAATATCATTGGGAGTCAC
GGGTACCTCACTTTTAACAACAGTAATATTGACTTCTTGTCCAGTTGCTGGCTTAGTTGTTTTATTTACATTGGAATCGA
AAGGTGATGCAGAACCAGGAATACTCTTGGTTAGTTTGTCTACGATTTTATCATTAATAACAATCCCATTCATCATTTTT
TTCCTTAATTTTTTGCATCTAAATTCCTAA

Upstream 100 bases:

>100_bases
CAGAGATACAACTAATACTGATTTAACAAAAATTATTTTATATTTTATCTCTCCATGTGTAATCATTAAAGCTTTTGAGC
AAAAATTTACTGCGGATCGT

Downstream 100 bases:

>100_bases
TGTTGAACCTCTACAATTGTGATATAATATTATATTCTAAAGCAGTCTGCTAACGGTTTGAAAAAATAGTTGACGTTAAG
TCAAGTTTTTAGAGTAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: Permease; Transporter Auxin Efflux Carrier Family Protein; Malate Permease; Auxin Efflux Carrier Family Protein; AEC Family Permease; Transporter Protein; Malate Permease Related Permease

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MITFLITSIGVFAIYIISIIISKLIFSKVKDKNLQRTLKYGSVYPNSGFMGIPLAQALFGSHGVFFSVISVLAFNIFSWS
HGVSLFNEQKGWKELSRDILVNPNIIAILLGIFVFVFSIPIPNVVNQLLDYIAAMFAPLSMIIIGCSLADIQLKALSFNR
LLILAILLKNFIYPIFSIFILISLGVTGTSLLTTVILTSCPVAGLVVLFTLESKGDAEPGILLVSLSTILSLITIPFIIF
FLNFLHLNS

Sequences:

>Translated_249_residues
MITFLITSIGVFAIYIISIIISKLIFSKVKDKNLQRTLKYGSVYPNSGFMGIPLAQALFGSHGVFFSVISVLAFNIFSWS
HGVSLFNEQKGWKELSRDILVNPNIIAILLGIFVFVFSIPIPNVVNQLLDYIAAMFAPLSMIIIGCSLADIQLKALSFNR
LLILAILLKNFIYPIFSIFILISLGVTGTSLLTTVILTSCPVAGLVVLFTLESKGDAEPGILLVSLSTILSLITIPFIIF
FLNFLHLNS
>Mature_249_residues
MITFLITSIGVFAIYIISIIISKLIFSKVKDKNLQRTLKYGSVYPNSGFMGIPLAQALFGSHGVFFSVISVLAFNIFSWS
HGVSLFNEQKGWKELSRDILVNPNIIAILLGIFVFVFSIPIPNVVNQLLDYIAAMFAPLSMIIIGCSLADIQLKALSFNR
LLILAILLKNFIYPIFSIFILISLGVTGTSLLTTVILTSCPVAGLVVLFTLESKGDAEPGILLVSLSTILSLITIPFIIF
FLNFLHLNS

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27324; Mature: 27324

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITFLITSIGVFAIYIISIIISKLIFSKVKDKNLQRTLKYGSVYPNSGFMGIPLAQALFG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHC
SHGVFFSVISVLAFNIFSWSHGVSLFNEQKGWKELSRDILVNPNIIAILLGIFVFVFSIP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
IPNVVNQLLDYIAAMFAPLSMIIIGCSLADIQLKALSFNRLLILAILLKNFIYPIFSIFI
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LISLGVTGTSLLTTVILTSCPVAGLVVLFTLESKGDAEPGILLVSLSTILSLITIPFIIF
HHHHCCCHHHHHHHHHHHHCCHHHHHHHEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHH
FLNFLHLNS
HHHHHHCCC
>Mature Secondary Structure
MITFLITSIGVFAIYIISIIISKLIFSKVKDKNLQRTLKYGSVYPNSGFMGIPLAQALFG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHC
SHGVFFSVISVLAFNIFSWSHGVSLFNEQKGWKELSRDILVNPNIIAILLGIFVFVFSIP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
IPNVVNQLLDYIAAMFAPLSMIIIGCSLADIQLKALSFNRLLILAILLKNFIYPIFSIFI
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LISLGVTGTSLLTTVILTSCPVAGLVVLFTLESKGDAEPGILLVSLSTILSLITIPFIIF
HHHHCCCHHHHHHHHHHHHCCHHHHHHHEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHH
FLNFLHLNS
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA