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The map label for this gene is yxfC

Identifier: 15674248

GI number: 15674248

Start: 2358906

End: 2359847

Strand: Reverse

Name: yxfC

Synonym: L142355

Alternate gene names: 15674248

Gene position: 2359847-2358906 (Counterclockwise)

Preceding gene: NA

Following gene: 15674247

Centisome position: 99.76

GC content: 37.15

Gene sequence:

>942_bases
ATGCAAAAGAGATATACAACTTGGAATGAATATTTGCGAACCAATTTTGGTGAAAAAATATTTAAAGTTCCTATTGATGC
TGGTTTTGACTGCCCTAATCGGGATGGTACGGTTGCTCATGGTGGATGTACTTTTTGTACAGTATCTGGTTCAGGGGATA
TGATTTTGGAGCCAGAGGCTCCAATTGCGGACCAATTTGCTGCCGAAGTGGCTCAATTTCATAAAAAGTGGCCTGGAGTG
AAGAAATATATTGTTTATTTCCAAAATTTCACTAATACTCACGCGCCTGTTGAAGTACTGAGAGAGCGTTTTGAACAAGC
GGTAAACCAACCAGATGTTGTAGGTATTTCAATTGGTACTCGTCCTGACTGTTTACCAGATGACGTTGTAGATTACTTGG
CAGAATTAAATCGTCGAATGGAAGTTTGGATTGATTTGGGTCTGCAGACAACTTATGAAGAAACATCAGATTTGATTAAT
CGAGCTCATGATTATGAAACCTATGTAGATGCGGTGAAGCGATTGAGGGTTCATAATATTAATGTTTGTACTCACTTAAT
CAATGGTTTACCTGGTGAAACTAGTGAGATGATGTTAGAAAATGTTCGCAGAATGGTTTTAGATTCTGATATTCAAGGTG
TGAAATTACATTTACTTCATTTGATGAAGCAAACTCGTTTGCAACGTGATTATCATGAAGGAAAATTACAGCTGATGTCG
CAAGAGGAATATGTAAAAGTGATTTGTGACCAACTAGAGATGATTCCAAAAGAAATTGTTATTCATCGTTTAACAGGAGA
TGCTCCGCGGGATTTAATTATTGGACCTATGTGGTCTTTAAAAAAGTGGGAAGTTTTGAATAGTATTGATGCTGAAATGG
AACGGCGAGGAAGTGTTCAAGGTTGTAAAGATGTTCGGATTAGTGATCTAATTACATTTTAA

Upstream 100 bases:

>100_bases
CGCAGCTTTTAAGAGACCTACGGGTCTCTTTTTTTATTATAAATACAGAAAATGTTTAAGAAATTTTGATATAATTTGAT
AAACGGAGAGATGATATAAA

Downstream 100 bases:

>100_bases
CTGACAGGAGGTGAATTTTTATTCATCTCTTTTTTATTGAATTTGGTGTTATAATAGGAAAGAAATTGAAAATCTGTCAG
TAAAACTGAAATTGGTATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MQKRYTTWNEYLRTNFGEKIFKVPIDAGFDCPNRDGTVAHGGCTFCTVSGSGDMILEPEAPIADQFAAEVAQFHKKWPGV
KKYIVYFQNFTNTHAPVEVLRERFEQAVNQPDVVGISIGTRPDCLPDDVVDYLAELNRRMEVWIDLGLQTTYEETSDLIN
RAHDYETYVDAVKRLRVHNINVCTHLINGLPGETSEMMLENVRRMVLDSDIQGVKLHLLHLMKQTRLQRDYHEGKLQLMS
QEEYVKVICDQLEMIPKEIVIHRLTGDAPRDLIIGPMWSLKKWEVLNSIDAEMERRGSVQGCKDVRISDLITF

Sequences:

>Translated_313_residues
MQKRYTTWNEYLRTNFGEKIFKVPIDAGFDCPNRDGTVAHGGCTFCTVSGSGDMILEPEAPIADQFAAEVAQFHKKWPGV
KKYIVYFQNFTNTHAPVEVLRERFEQAVNQPDVVGISIGTRPDCLPDDVVDYLAELNRRMEVWIDLGLQTTYEETSDLIN
RAHDYETYVDAVKRLRVHNINVCTHLINGLPGETSEMMLENVRRMVLDSDIQGVKLHLLHLMKQTRLQRDYHEGKLQLMS
QEEYVKVICDQLEMIPKEIVIHRLTGDAPRDLIIGPMWSLKKWEVLNSIDAEMERRGSVQGCKDVRISDLITF
>Mature_313_residues
MQKRYTTWNEYLRTNFGEKIFKVPIDAGFDCPNRDGTVAHGGCTFCTVSGSGDMILEPEAPIADQFAAEVAQFHKKWPGV
KKYIVYFQNFTNTHAPVEVLRERFEQAVNQPDVVGISIGTRPDCLPDDVVDYLAELNRRMEVWIDLGLQTTYEETSDLIN
RAHDYETYVDAVKRLRVHNINVCTHLINGLPGETSEMMLENVRRMVLDSDIQGVKLHLLHLMKQTRLQRDYHEGKLQLMS
QEEYVKVICDQLEMIPKEIVIHRLTGDAPRDLIIGPMWSLKKWEVLNSIDAEMERRGSVQGCKDVRISDLITF

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=302, Percent_Identity=36.7549668874172, Blast_Score=228, Evalue=4e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 36015; Mature: 36015

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKRYTTWNEYLRTNFGEKIFKVPIDAGFDCPNRDGTVAHGGCTFCTVSGSGDMILEPEA
CCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEECCEEEEEECCCCCEEECCCC
PIADQFAAEVAQFHKKWPGVKKYIVYFQNFTNTHAPVEVLRERFEQAVNQPDVVGISIGT
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCC
RPDCLPDDVVDYLAELNRRMEVWIDLGLQTTYEETSDLINRAHDYETYVDAVKRLRVHNI
CCCCCHHHHHHHHHHHCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
NVCTHLINGLPGETSEMMLENVRRMVLDSDIQGVKLHLLHLMKQTRLQRDYHEGKLQLMS
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QEEYVKVICDQLEMIPKEIVIHRLTGDAPRDLIIGPMWSLKKWEVLNSIDAEMERRGSVQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCC
GCKDVRISDLITF
CCCCCCHHHHHCC
>Mature Secondary Structure
MQKRYTTWNEYLRTNFGEKIFKVPIDAGFDCPNRDGTVAHGGCTFCTVSGSGDMILEPEA
CCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEECCEEEEEECCCCCEEECCCC
PIADQFAAEVAQFHKKWPGVKKYIVYFQNFTNTHAPVEVLRERFEQAVNQPDVVGISIGT
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCC
RPDCLPDDVVDYLAELNRRMEVWIDLGLQTTYEETSDLINRAHDYETYVDAVKRLRVHNI
CCCCCHHHHHHHHHHHCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
NVCTHLINGLPGETSEMMLENVRRMVLDSDIQGVKLHLLHLMKQTRLQRDYHEGKLQLMS
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QEEYVKVICDQLEMIPKEIVIHRLTGDAPRDLIIGPMWSLKKWEVLNSIDAEMERRGSVQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCC
GCKDVRISDLITF
CCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]