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The map label for this gene is yxfB

Identifier: 15674247

GI number: 15674247

Start: 2358185

End: 2358775

Strand: Reverse

Name: yxfB

Synonym: L141634

Alternate gene names: 15674247

Gene position: 2358775-2358185 (Counterclockwise)

Preceding gene: 15674248

Following gene: 15674246

Centisome position: 99.71

GC content: 36.38

Gene sequence:

>591_bases
ATGTTAAAACAGTTAGAAATGGCTCACTGGATGTTGAAAGATATCATCAAAACTAATGATGTTGTGGTGGATGCAACGAT
GGGGAATGGTTATGATACTCAATTTTTAGCGGAATTAGGGGCGAATGTATATGCTTTTGATGTGCAAGAAGAAGCGCTGA
ATGCAACTGAAAAACGTTTAGATGATGCTGGAATAAAGAATCAAATATTTGAAAAAAATCTCTCGAAGTTACTGACAGAG
CCGTCAGTAAATCTAGTTTTGTCTGGTCATGAAAAGCTTTCTGAATATGTCAAGGAGCCAATCAAAGCAGCTATTTTTAA
TCTTGGATACTTACCAAAAACTGATAAAAGTGTGGTTACAAAGGCTGATACCACTTTGACTGCTCTAGATGCTTTGACTA
ATCAGTTAGTTGTAGGTGGAAGAATTGCGATTATGATTTATTACGGTCATGAGGGGGGAATGGAAGAAAAAAATGCCGTT
ATTAAGTGGACTTCTAGTTTGCCACAAAAAGACTGGGAAGTGACTTCTTATGCACCTCTTAACCAAATTCATACGCCGCC
AATTTTAGTTCTAATCGAAAAAAGAAAATAA

Upstream 100 bases:

>100_bases
TTTTTATTGAATTTGGTGTTATAATAGGAAAGAAATTGAAAATCTGTCAGTAAAACTGAAATTGGTATATAAAAATAATT
AGAAAGTGATGAGGAAATAA

Downstream 100 bases:

>100_bases
ATTTACTTGAATAGTTATGAATCTTATGTATTCTTTTATCTCTTGTTTTTTCCAAAAAAAAGAGTAAAATAGAGAAATGC
TTATTTTTTTAAGTAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MLKQLEMAHWMLKDIIKTNDVVVDATMGNGYDTQFLAELGANVYAFDVQEEALNATEKRLDDAGIKNQIFEKNLSKLLTE
PSVNLVLSGHEKLSEYVKEPIKAAIFNLGYLPKTDKSVVTKADTTLTALDALTNQLVVGGRIAIMIYYGHEGGMEEKNAV
IKWTSSLPQKDWEVTSYAPLNQIHTPPILVLIEKRK

Sequences:

>Translated_196_residues
MLKQLEMAHWMLKDIIKTNDVVVDATMGNGYDTQFLAELGANVYAFDVQEEALNATEKRLDDAGIKNQIFEKNLSKLLTE
PSVNLVLSGHEKLSEYVKEPIKAAIFNLGYLPKTDKSVVTKADTTLTALDALTNQLVVGGRIAIMIYYGHEGGMEEKNAV
IKWTSSLPQKDWEVTSYAPLNQIHTPPILVLIEKRK
>Mature_196_residues
MLKQLEMAHWMLKDIIKTNDVVVDATMGNGYDTQFLAELGANVYAFDVQEEALNATEKRLDDAGIKNQIFEKNLSKLLTE
PSVNLVLSGHEKLSEYVKEPIKAAIFNLGYLPKTDKSVVTKADTTLTALDALTNQLVVGGRIAIMIYYGHEGGMEEKNAV
IKWTSSLPQKDWEVTSYAPLNQIHTPPILVLIEKRK

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010719 [H]

Pfam domain/function: PF06962 rRNA_methylase [H]

EC number: NA

Molecular weight: Translated: 21892; Mature: 21892

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKQLEMAHWMLKDIIKTNDVVVDATMGNGYDTQFLAELGANVYAFDVQEEALNATEKRL
CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCEEEEECHHHHHHHHHHHH
DDAGIKNQIFEKNLSKLLTEPSVNLVLSGHEKLSEYVKEPIKAAIFNLGYLPKTDKSVVT
HHCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEE
KADTTLTALDALTNQLVVGGRIAIMIYYGHEGGMEEKNAVIKWTSSLPQKDWEVTSYAPL
ECCHHHHHHHHHHHHEEECCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
NQIHTPPILVLIEKRK
CCCCCCCEEEEEECCC
>Mature Secondary Structure
MLKQLEMAHWMLKDIIKTNDVVVDATMGNGYDTQFLAELGANVYAFDVQEEALNATEKRL
CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCEEEEECHHHHHHHHHHHH
DDAGIKNQIFEKNLSKLLTEPSVNLVLSGHEKLSEYVKEPIKAAIFNLGYLPKTDKSVVT
HHCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEE
KADTTLTALDALTNQLVVGGRIAIMIYYGHEGGMEEKNAVIKWTSSLPQKDWEVTSYAPL
ECCHHHHHHHHHHHHEEECCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
NQIHTPPILVLIEKRK
CCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]