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The map label for this gene is yxdF

Identifier: 15674233

GI number: 15674233

Start: 2339285

End: 2339818

Strand: Direct

Name: yxdF

Synonym: L122569

Alternate gene names: 15674233

Gene position: 2339285-2339818 (Clockwise)

Preceding gene: 15674232

Following gene: 15674234

Centisome position: 98.89

GC content: 32.02

Gene sequence:

>534_bases
ATGACTTTGGTATTAATACTCATTTTTATAATTGCTTGGAAGCTCGGATATCTAAAAAATACACTTAAGAACTGGGATTT
AAAGCGTATTTTTTGGCTAATGGGGATTGTGTTTTTCACTTTAGCAACCAATTATCTAGTAACAGTACTTGTCCTAAAAA
CACAAATTATTTCTTCCGTGACGAGTGATACTGGTATGTCGGATATTTTAGGCCAACTACCAATCCTTTGTCAAAAATAT
ATTTTAGGAATTATTGTTCCACTTTCGGAAGAGCTATTGTTTAGAAGTTATATTTTTGGATCAATAACTAATAAAAAGGT
TGCCTTTTTAATCTCTTCTGTACTTTTCGCTCTTGTCCATACGGGATTTTCTTGGTACTTACTTCCATATCTCATCCTTT
CTTTTATTATTACTTGGGTTTATTCAAAAAGAAATAATTTCATCGAGAGCGCGATTGTCCATAGCTCAGTGAATCTTTTT
GGTGGATCTGCAATCAAACTACTAGACACATTTTTTAAGCTATTACCTTATTAA

Upstream 100 bases:

>100_bases
ATATCCTCTTGTTTTAGTTTTTGCCTATTTCTTTAATAAAAGAATCTTTTTCTTTACCGATTTTTTATATACTAATTCCT
CTTGGACCTTACCACTATTA

Downstream 100 bases:

>100_bases
AAAATAATGTAAAAAGGAGAACTATGAAAAATTTTATAAACAAACCAAATAATATTAAAAGATGGATCTTATTACTATAT
TCTATCCTTTCGCTAATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MTLVLILIFIIAWKLGYLKNTLKNWDLKRIFWLMGIVFFTLATNYLVTVLVLKTQIISSVTSDTGMSDILGQLPILCQKY
ILGIIVPLSEELLFRSYIFGSITNKKVAFLISSVLFALVHTGFSWYLLPYLILSFIITWVYSKRNNFIESAIVHSSVNLF
GGSAIKLLDTFFKLLPY

Sequences:

>Translated_177_residues
MTLVLILIFIIAWKLGYLKNTLKNWDLKRIFWLMGIVFFTLATNYLVTVLVLKTQIISSVTSDTGMSDILGQLPILCQKY
ILGIIVPLSEELLFRSYIFGSITNKKVAFLISSVLFALVHTGFSWYLLPYLILSFIITWVYSKRNNFIESAIVHSSVNLF
GGSAIKLLDTFFKLLPY
>Mature_176_residues
TLVLILIFIIAWKLGYLKNTLKNWDLKRIFWLMGIVFFTLATNYLVTVLVLKTQIISSVTSDTGMSDILGQLPILCQKYI
LGIIVPLSEELLFRSYIFGSITNKKVAFLISSVLFALVHTGFSWYLLPYLILSFIITWVYSKRNNFIESAIVHSSVNLFG
GSAIKLLDTFFKLLPY

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0177 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YXDF_LACLA (Q9CDG9)

Other databases:

- EMBL:   AE005176
- PIR:   C86906
- RefSeq:   NP_268408.1
- GeneID:   1115929
- GenomeReviews:   AE005176_GR
- KEGG:   lla:L122569
- NMPDR:   fig|272623.1.peg.2306
- HOGENOM:   HBG108213
- OMA:   RNNFIES
- ProtClustDB:   CLSK554755
- BioCyc:   LLAC272623:L122569-MONOMER
- InterPro:   IPR003675

Pfam domain/function: PF02517 Abi

EC number: NA

Molecular weight: Translated: 20217; Mature: 20085

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10109514)-; HASH(0x10646db4)-; HASH(0x10636f5c)-; HASH(0x10636f68)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLVLILIFIIAWKLGYLKNTLKNWDLKRIFWLMGIVFFTLATNYLVTVLVLKTQIISSV
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSDTGMSDILGQLPILCQKYILGIIVPLSEELLFRSYIFGSITNKKVAFLISSVLFALVH
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
TGFSWYLLPYLILSFIITWVYSKRNNFIESAIVHSSVNLFGGSAIKLLDTFFKLLPY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCH
>Mature Secondary Structure 
TLVLILIFIIAWKLGYLKNTLKNWDLKRIFWLMGIVFFTLATNYLVTVLVLKTQIISSV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSDTGMSDILGQLPILCQKYILGIIVPLSEELLFRSYIFGSITNKKVAFLISSVLFALVH
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
TGFSWYLLPYLILSFIITWVYSKRNNFIESAIVHSSVNLFGGSAIKLLDTFFKLLPY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471