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The map label for this gene is yxcB

Identifier: 15674221

GI number: 15674221

Start: 2325385

End: 2325999

Strand: Direct

Name: yxcB

Synonym: L108801

Alternate gene names: 15674221

Gene position: 2325385-2325999 (Clockwise)

Preceding gene: 15674214

Following gene: 15674224

Centisome position: 98.3

GC content: 33.98

Gene sequence:

>615_bases
ATGGTTAAATCAGATGATTTACGTGTGAAACGAACAAGAAAATTGATTAGTCAGGCTTTTTTTGGTTTGTTACGCAAGAA
AAAATTTGAAAAGATTTCAATTCAAGAAATTGCCGATTCAGCCATGATTAATCGGGCAACTTTTTATGCTCATTATGCTG
ACAAACAAGATTTATATGATAGTTTGATTGACCAATTTTTAGCTAGCTTCACTGGCATTTTAGATGAACAAAATTTGGTT
GATGGTAACAATGTTCATGTCAAAGAAATTGAAACTGTCTTGAGTCGTTTCTATGAATTTGTTCGCGATAATCCTGAAAT
TGCACAAATGATTACTGACAGAGCGCATGATCAACGATTAAAAAATCGATTTCTGGAGATTTTATCTGAACGCTATACCG
AGTTATTTGAAAAACTGGAAGTTAGAGAAAAAGATGTTGTGGTTCCCAATGATTTTGTAATTTCTTACATCAGCTCGATT
TTGGTGGGAACTTTAGACTGGTGGGTCAGCACTTCTACACAAATGTCTGCTCGAGATTTTGCTCATTTGATTATCAAATT
AATTTCTAATGGCCATTTGACCGTCCTTGGGGTCAATATTAATCGCGAAAATTAA

Upstream 100 bases:

>100_bases
TATTTTTTGATTATAATGGAGTTAAATAGTACAATGTGAAAAATTAGACAAAACAGTCTATCGGGACTGAGTCTTTTTGA
AACTGGAAAGATGGTTTTTT

Downstream 100 bases:

>100_bases
AAAAGTTACTGATGAAACTTCTAGGATAGCCGTTGTTTTTTAACTTACGGATACCTTCGAATTTTCATCAGTAACTTTTT
ATTTTTTCAAATTTTCTATT

Product: transcription regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator TetR-Related Family; TetR Family Regulatory Protein Of MDR Cluster; AcrR Family Transcriptional Regulator; Transcription Regulator; TetR Family Regulatory Protein; Acrr-Type Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; AraC Family Transcriptional Regulator

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MVKSDDLRVKRTRKLISQAFFGLLRKKKFEKISIQEIADSAMINRATFYAHYADKQDLYDSLIDQFLASFTGILDEQNLV
DGNNVHVKEIETVLSRFYEFVRDNPEIAQMITDRAHDQRLKNRFLEILSERYTELFEKLEVREKDVVVPNDFVISYISSI
LVGTLDWWVSTSTQMSARDFAHLIIKLISNGHLTVLGVNINREN

Sequences:

>Translated_204_residues
MVKSDDLRVKRTRKLISQAFFGLLRKKKFEKISIQEIADSAMINRATFYAHYADKQDLYDSLIDQFLASFTGILDEQNLV
DGNNVHVKEIETVLSRFYEFVRDNPEIAQMITDRAHDQRLKNRFLEILSERYTELFEKLEVREKDVVVPNDFVISYISSI
LVGTLDWWVSTSTQMSARDFAHLIIKLISNGHLTVLGVNINREN
>Mature_204_residues
MVKSDDLRVKRTRKLISQAFFGLLRKKKFEKISIQEIADSAMINRATFYAHYADKQDLYDSLIDQFLASFTGILDEQNLV
DGNNVHVKEIETVLSRFYEFVRDNPEIAQMITDRAHDQRLKNRFLEILSERYTELFEKLEVREKDVVVPNDFVISYISSI
LVGTLDWWVSTSTQMSARDFAHLIIKLISNGHLTVLGVNINREN

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23763; Mature: 23763

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSDDLRVKRTRKLISQAFFGLLRKKKFEKISIQEIADSAMINRATFYAHYADKQDLYD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
SLIDQFLASFTGILDEQNLVDGNNVHVKEIETVLSRFYEFVRDNPEIAQMITDRAHDQRL
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KNRFLEILSERYTELFEKLEVREKDVVVPNDFVISYISSILVGTLDWWVSTSTQMSARDF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AHLIIKLISNGHLTVLGVNINREN
HHHHHHHHCCCCEEEEEEEECCCC
>Mature Secondary Structure
MVKSDDLRVKRTRKLISQAFFGLLRKKKFEKISIQEIADSAMINRATFYAHYADKQDLYD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
SLIDQFLASFTGILDEQNLVDGNNVHVKEIETVLSRFYEFVRDNPEIAQMITDRAHDQRL
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KNRFLEILSERYTELFEKLEVREKDVVVPNDFVISYISSILVGTLDWWVSTSTQMSARDF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AHLIIKLISNGHLTVLGVNINREN
HHHHHHHHCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA