| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is mreC
Identifier: 15674213
GI number: 15674213
Start: 2315300
End: 2316175
Strand: Reverse
Name: mreC
Synonym: L98749
Alternate gene names: 15674213
Gene position: 2316175-2315300 (Counterclockwise)
Preceding gene: 15674215
Following gene: 15674212
Centisome position: 97.91
GC content: 35.5
Gene sequence:
>876_bases GTGAAAAAAATTAACTTAAGTAAGCTTATTATTATTGCACTCATTATCATTATTGCAGCGATGTCAGCAATTTTTATCTC TGCCAAAAATTTTAAGTCTAACCGTAATCCGTCAGCAATGACTCAAACCATTAATGATGGGACAAGTTTTGTTGACAGAG TACTTGTGGCACCTATCCACTTTGTTCAAGACAAGGCTAATGAATTGTCGAATCTGATGGATACCTACCAACAAAACCAA AGTTTAAAAACACAATTGGCAAAGTCAAAAGATGATGATAATAAATTAAGCGGCCTTGAGTCAGAAAATAAAGAGTTGAA AAAAGCTTTGAAACTCCAAGAAACTTTAACTGATTATCAAACGGTTGCTGCAAATGTGATTACTCGTGAGCCTTCTTCAT GGAATGATACACTAGTGATTGATAGCGGTAGTAAGGATGGCTTGACAACAGGTATGATTGTTATGGCAAATGGTGGCGTT GTTGGTCGAGTAACTCAAGTGAATAAAAATAGTTCAAAAGTTGCACTTTTAAGTTCTTCTAAAGGAATTGATAATAAAAT TCCTGTAAGAATTGAAAGTGACGGCTCACCTATTTATGGCATTTTGAGCAGCTATGATTCCCAACAAGAGGCTTATGTAG TTAAAAATATCGACTCACAAGGGAAATTTAAAAATGGAGATTCCGTTTTTACTAGTGGTCTTGGAACGAATTCTGGTAGT CAAGGTGGAACACCAAGTGGTTTACTTATAGGAAAGGTTATCGGTGAAAAGCAAGATAGTGATGGCCTTGGTAAAATGGT TTATATCAAACCAGAAACAAATCTCTATGATATTAGATTCGTCTTTGTGGTCAAAAGCAAAATTGACGGTCAGTAG
Upstream 100 bases:
>100_bases AAGAATTGCTTTTGCTTATGCAAAGGGCTATGTGAAATCACAGAGATTTCAAATTTAATTTAGAGAGTTTGAAACATATT ACCGAAGGGAACATAGAATA
Downstream 100 bases:
>100_bases TTTTTGCTAGATAAGTATTAATTATTATTTTGCTTATGGAAATAAAGCATTAATTTGTTAAAACCAACTAGAATATAAGG AATTAAGTAGTGAGTCGATT
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MKKINLSKLIIIALIIIIAAMSAIFISAKNFKSNRNPSAMTQTINDGTSFVDRVLVAPIHFVQDKANELSNLMDTYQQNQ SLKTQLAKSKDDDNKLSGLESENKELKKALKLQETLTDYQTVAANVITREPSSWNDTLVIDSGSKDGLTTGMIVMANGGV VGRVTQVNKNSSKVALLSSSKGIDNKIPVRIESDGSPIYGILSSYDSQQEAYVVKNIDSQGKFKNGDSVFTSGLGTNSGS QGGTPSGLLIGKVIGEKQDSDGLGKMVYIKPETNLYDIRFVFVVKSKIDGQ
Sequences:
>Translated_291_residues MKKINLSKLIIIALIIIIAAMSAIFISAKNFKSNRNPSAMTQTINDGTSFVDRVLVAPIHFVQDKANELSNLMDTYQQNQ SLKTQLAKSKDDDNKLSGLESENKELKKALKLQETLTDYQTVAANVITREPSSWNDTLVIDSGSKDGLTTGMIVMANGGV VGRVTQVNKNSSKVALLSSSKGIDNKIPVRIESDGSPIYGILSSYDSQQEAYVVKNIDSQGKFKNGDSVFTSGLGTNSGS QGGTPSGLLIGKVIGEKQDSDGLGKMVYIKPETNLYDIRFVFVVKSKIDGQ >Mature_291_residues MKKINLSKLIIIALIIIIAAMSAIFISAKNFKSNRNPSAMTQTINDGTSFVDRVLVAPIHFVQDKANELSNLMDTYQQNQ SLKTQLAKSKDDDNKLSGLESENKELKKALKLQETLTDYQTVAANVITREPSSWNDTLVIDSGSKDGLTTGMIVMANGGV VGRVTQVNKNSSKVALLSSSKGIDNKIPVRIESDGSPIYGILSSYDSQQEAYVVKNIDSQGKFKNGDSVFTSGLGTNSGS QGGTPSGLLIGKVIGEKQDSDGLGKMVYIKPETNLYDIRFVFVVKSKIDGQ
Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mreC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007221 - InterPro: IPR005223 [H]
Pfam domain/function: PF04085 MreC [H]
EC number: NA
Molecular weight: Translated: 31449; Mature: 31449
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKINLSKLIIIALIIIIAAMSAIFISAKNFKSNRNPSAMTQTINDGTSFVDRVLVAPIH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHH FVQDKANELSNLMDTYQQNQSLKTQLAKSKDDDNKLSGLESENKELKKALKLQETLTDYQ HHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHH TVAANVITREPSSWNDTLVIDSGSKDGLTTGMIVMANGGVVGRVTQVNKNSSKVALLSSS HHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCEEEEEEEECCCCCEEEEEECC KGIDNKIPVRIESDGSPIYGILSSYDSQQEAYVVKNIDSQGKFKNGDSVFTSGLGTNSGS CCCCCCCCEEEECCCCCEEHHHHCCCCCCCEEEEECCCCCCCCCCCCHHEECCCCCCCCC QGGTPSGLLIGKVIGEKQDSDGLGKMVYIKPETNLYDIRFVFVVKSKIDGQ CCCCCCCEEEEHHHCCCCCCCCCCEEEEECCCCCEEEEEEEEEEECCCCCC >Mature Secondary Structure MKKINLSKLIIIALIIIIAAMSAIFISAKNFKSNRNPSAMTQTINDGTSFVDRVLVAPIH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHH FVQDKANELSNLMDTYQQNQSLKTQLAKSKDDDNKLSGLESENKELKKALKLQETLTDYQ HHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHH TVAANVITREPSSWNDTLVIDSGSKDGLTTGMIVMANGGVVGRVTQVNKNSSKVALLSSS HHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCEEEEEEEECCCCCEEEEEECC KGIDNKIPVRIESDGSPIYGILSSYDSQQEAYVVKNIDSQGKFKNGDSVFTSGLGTNSGS CCCCCCCCEEEECCCCCEEHHHHCCCCCCCEEEEECCCCCCCCCCCCHHEECCCCCCCCC QGGTPSGLLIGKVIGEKQDSDGLGKMVYIKPETNLYDIRFVFVVKSKIDGQ CCCCCCCEEEEHHHCCCCCCCCCCEEEEECCCCCEEEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1400225; 1400224; 9384377 [H]