| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is pspA
Identifier: 15674204
GI number: 15674204
Start: 2303692
End: 2305140
Strand: Direct
Name: pspA
Synonym: L87107
Alternate gene names: NA
Gene position: 2303692-2305140 (Clockwise)
Preceding gene: 15674202
Following gene: 15674214
Centisome position: 97.38
GC content: 37.27
Gene sequence:
>1449_bases ATGGAGAAACCCATTATGAAACCCTCAAAATTTTATCTCTTTTCTTTTTTATTAATTTTGATATTACTAACTTCAGACGT AAAGGGAGAAGCTAACACTCCCCCTTCAAGCTCAAACAATAGAGCCTCGTCATCAGGTTCAGGATCCCAAAGCACCGCAA GTTCCTCAACTCAGACTCAAGCCAGTACGACTATTGATACAACTTCATCAACATCACCATCTGTGTCAGAACCATCCAAT ACTACAAATAGTAAAATATTACAAGAATCAGATACTGCTCAAACTCAAACATCATCTACGACTGAACAATCCACATCAGA AAAAAATGGGATTGTGAACGAAAATGGTGAAAGGTATTATTATATTAATGGAGTTCTTCAAAAAGGGCAACAAAACATTA ATGGTAGTTGGTATCTTTTTAACCGTACAACAGGAGTGATGATGTATGGACAACAAAAAGATAGTAATGGCCAATGGTAT CTCTTTGATCGCTCTTCTGGAATCATGAGAAAAGGACAGGTCAATGATGCTGGGAATTGGTATCTCTTTGATCGCTCTTC TGGAATTATGAGAAAAGGACAGGTCAATGATGCTGGGAATTGGTATCTCTTTGATCGCTCTTCTGGAATTATGAGAAAAG GACAGGTCAATGATGCTGGAAATTGGTATCTCTTTGATCGCTCTTCTGGAGTCATGAGAAAAGGACAGGTCAATGATGCT GGGAATTGGTATCTCTTTAATCGTTCAAGTGGGATAATGATGTATGGTCTGCAAACAGACATTAATGGTAAAACTTATTA TTTCAATAACGCTGGTAAAATGGTTTACGGAACAGGCACTCTTGAAAAAACAAACTATAAATTTAATACAACTTCTGGGG AATGCTATTATGCACTCCTCTCTGCTGGAAATATAAATCAATACACAATCGGAGCTTATCAAGCCTGTGAAGTAGTGGCA TTATATAATGGATTGATTGCATTAGGAAAGACAAACTCCAAATCTATTCAACAAACTATCAATACACTCCCTCGTAATAT CAATCCAAATTTGGGTTATTCTGGTAATCCTTGGGATGCTTCTGCTGTCAATTTTCCTTACAACGGCTATGTTATCTGGG CTACAGCTCTCACTTCATTTGCCAAAAGCTATGCTGCTACTGCCCAAAATATTTCTGGTACGAGTTTAGTCAATATGGAA AAACAGGCGCTCAAAGGTCGTCCAATAGTTATCTGGGGAACGCTCAATATGGCGAAAGCGCATATCGTAAATTCAAACTA TTATGGTGGTCATGAGTTAAGTAACAGTCATACTTACCTCATTGATGGTTACAATGCACAAACTAATCAATTTCACATCA CTGATTCTATCTATGGAAAATATTGGAAAGATACTTCTACCGTAGTAAAGGCTTATTACAGTAATAACTCATTCGCACTA CTCCTTTAA
Upstream 100 bases:
>100_bases AGTATGCATTACCTAAAGTAATGTTTCTGATTGTTGATATTCAATATTGAAATATTATATAATAAAGTGAATTATAATTC ACTTTATTATACATAACTTC
Downstream 100 bases:
>100_bases TCTAATCAAAACAAAAAGCGTGAATTACCTTTATAGAGAACACGCCTTTTTATTTTATTTTGGTACTACCGACCATAAAG GAAAACCTGCATCATGATCA
Product: glucosyltransferase-S
Products: NA
Alternate protein names: Cell Wall Hydrolase/Autolysin; Glycoside Hydrolase Family; Glucosyltransferase-S; Glycosyl Hydrolase Family; 1 4-Beta-N-Acetylmuramidase; Surface Protein A; N-Acetylmuramoyl-L-Alanine Amidase; Surface Protein C; Glycosyl Hydrolases Family; Conserved Repeat Protein; Surface Protective Antigen SpaB; Protective Antigen SpaA-Like Protein; Pneumococcal Surface Protein A; Glucosyltransferase
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MEKPIMKPSKFYLFSFLLILILLTSDVKGEANTPPSSSNNRASSSGSGSQSTASSSTQTQASTTIDTTSSTSPSVSEPSN TTNSKILQESDTAQTQTSSTTEQSTSEKNGIVNENGERYYYINGVLQKGQQNINGSWYLFNRTTGVMMYGQQKDSNGQWY LFDRSSGIMRKGQVNDAGNWYLFDRSSGIMRKGQVNDAGNWYLFDRSSGIMRKGQVNDAGNWYLFDRSSGVMRKGQVNDA GNWYLFNRSSGIMMYGLQTDINGKTYYFNNAGKMVYGTGTLEKTNYKFNTTSGECYYALLSAGNINQYTIGAYQACEVVA LYNGLIALGKTNSKSIQQTINTLPRNINPNLGYSGNPWDASAVNFPYNGYVIWATALTSFAKSYAATAQNISGTSLVNME KQALKGRPIVIWGTLNMAKAHIVNSNYYGGHELSNSHTYLIDGYNAQTNQFHITDSIYGKYWKDTSTVVKAYYSNNSFAL LL
Sequences:
>Translated_482_residues MEKPIMKPSKFYLFSFLLILILLTSDVKGEANTPPSSSNNRASSSGSGSQSTASSSTQTQASTTIDTTSSTSPSVSEPSN TTNSKILQESDTAQTQTSSTTEQSTSEKNGIVNENGERYYYINGVLQKGQQNINGSWYLFNRTTGVMMYGQQKDSNGQWY LFDRSSGIMRKGQVNDAGNWYLFDRSSGIMRKGQVNDAGNWYLFDRSSGIMRKGQVNDAGNWYLFDRSSGVMRKGQVNDA GNWYLFNRSSGIMMYGLQTDINGKTYYFNNAGKMVYGTGTLEKTNYKFNTTSGECYYALLSAGNINQYTIGAYQACEVVA LYNGLIALGKTNSKSIQQTINTLPRNINPNLGYSGNPWDASAVNFPYNGYVIWATALTSFAKSYAATAQNISGTSLVNME KQALKGRPIVIWGTLNMAKAHIVNSNYYGGHELSNSHTYLIDGYNAQTNQFHITDSIYGKYWKDTSTVVKAYYSNNSFAL LL >Mature_482_residues MEKPIMKPSKFYLFSFLLILILLTSDVKGEANTPPSSSNNRASSSGSGSQSTASSSTQTQASTTIDTTSSTSPSVSEPSN TTNSKILQESDTAQTQTSSTTEQSTSEKNGIVNENGERYYYINGVLQKGQQNINGSWYLFNRTTGVMMYGQQKDSNGQWY LFDRSSGIMRKGQVNDAGNWYLFDRSSGIMRKGQVNDAGNWYLFDRSSGIMRKGQVNDAGNWYLFDRSSGVMRKGQVNDA GNWYLFNRSSGIMMYGLQTDINGKTYYFNNAGKMVYGTGTLEKTNYKFNTTSGECYYALLSAGNINQYTIGAYQACEVVA LYNGLIALGKTNSKSIQQTINTLPRNINPNLGYSGNPWDASAVNFPYNGYVIWATALTSFAKSYAATAQNISGTSLVNME KQALKGRPIVIWGTLNMAKAHIVNSNYYGGHELSNSHTYLIDGYNAQTNQFHITDSIYGKYWKDTSTVVKAYYSNNSFAL LL
Specific function: Unknown
COG id: COG4990
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53247; Mature: 53247
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKPIMKPSKFYLFSFLLILILLTSDVKGEANTPPSSSNNRASSSGSGSQSTASSSTQTQ CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASTTIDTTSSTSPSVSEPSNTTNSKILQESDTAQTQTSSTTEQSTSEKNGIVNENGERYY CCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHCCHHHCCCCCCCCCEEE YINGVLQKGQQNINGSWYLFNRTTGVMMYGQQKDSNGQWYLFDRSSGIMRKGQVNDAGNW EEEEEECCCCCCCCCCEEEEECCCEEEEECCCCCCCCCEEEEECCCCCEECCCCCCCCCE YLFDRSSGIMRKGQVNDAGNWYLFDRSSGIMRKGQVNDAGNWYLFDRSSGVMRKGQVNDA EEEECCCCCEECCCCCCCCCEEEEECCCCCEECCCCCCCCCEEEEECCCCCEECCCCCCC GNWYLFNRSSGIMMYGLQTDINGKTYYFNNAGKMVYGTGTLEKTNYKFNTTSGECYYALL CCEEEEECCCCEEEEEEEECCCCCEEEECCCCCEEEECCCEEECCEEEECCCCCEEEEEE SAGNINQYTIGAYQACEVVALYNGLIALGKTNSKSIQQTINTLPRNINPNLGYSGNPWDA ECCCCCEEEECHHHHHHHEEECCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC SAVNFPYNGYVIWATALTSFAKSYAATAQNISGTSLVNMEKQALKGRPIVIWGTLNMAKA CEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCCCEEEEECCCCEEE HIVNSNYYGGHELSNSHTYLIDGYNAQTNQFHITDSIYGKYWKDTSTVVKAYYSNNSFAL EEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEEHHHCCCCCCCCCEEEEEEECCCEEEE LL EC >Mature Secondary Structure MEKPIMKPSKFYLFSFLLILILLTSDVKGEANTPPSSSNNRASSSGSGSQSTASSSTQTQ CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASTTIDTTSSTSPSVSEPSNTTNSKILQESDTAQTQTSSTTEQSTSEKNGIVNENGERYY CCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHCCHHHCCCCCCCCCEEE YINGVLQKGQQNINGSWYLFNRTTGVMMYGQQKDSNGQWYLFDRSSGIMRKGQVNDAGNW EEEEEECCCCCCCCCCEEEEECCCEEEEECCCCCCCCCEEEEECCCCCEECCCCCCCCCE YLFDRSSGIMRKGQVNDAGNWYLFDRSSGIMRKGQVNDAGNWYLFDRSSGVMRKGQVNDA EEEECCCCCEECCCCCCCCCEEEEECCCCCEECCCCCCCCCEEEEECCCCCEECCCCCCC GNWYLFNRSSGIMMYGLQTDINGKTYYFNNAGKMVYGTGTLEKTNYKFNTTSGECYYALL CCEEEEECCCCEEEEEEEECCCCCEEEECCCCCEEEECCCEEECCEEEECCCCCEEEEEE SAGNINQYTIGAYQACEVVALYNGLIALGKTNSKSIQQTINTLPRNINPNLGYSGNPWDA ECCCCCEEEECHHHHHHHEEECCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC SAVNFPYNGYVIWATALTSFAKSYAATAQNISGTSLVNMEKQALKGRPIVIWGTLNMAKA CEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCCCEEEEECCCCEEE HIVNSNYYGGHELSNSHTYLIDGYNAQTNQFHITDSIYGKYWKDTSTVVKAYYSNNSFAL EEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEEHHHCCCCCCCCCEEEEEEECCCEEEE LL EC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA