Click here to switch to the map view.

The map label for this gene is ywdG

Identifier: 15674145

GI number: 15674145

Start: 2239050

End: 2239616

Strand: Reverse

Name: ywdG

Synonym: L22498

Alternate gene names: 15674145

Gene position: 2239616-2239050 (Counterclockwise)

Preceding gene: 15674146

Following gene: 15674144

Centisome position: 94.67

GC content: 35.63

Gene sequence:

>567_bases
TTGAAATTTTGTGATATAATTATTTTCATGAGAGTAGTTTCAGGAAATTATGGCGGAAGACCGCTGAAAACATTGGCAGG
AAAAACAACAAGACCAACCACCGATAAAGTTAAAGGAGCCATTTTTAATATGATTGGCCCTTATTTTGAAGGGGGACGTG
TTCTTGATTTATTTGCAGGCTCAGGTAGTTTGGCAATTGAAGCCATTTCAAGAGGAATGGATCACGCCATTCTTGTCGAA
AAAGACAGAGCAGCTCAACAAGTCATTTTGGAAAATATCAAGATGACCAAAGAGCCTGAAAAATTTCAATTATTAAAAAT
GTCAGCAGAACGAGTCTTATCAAACTTGTCAGAGACTTTTGATTTAGTCCTCTTAGACCCACCTTATGCTAAAGAACAAA
TTGTTGAAAACTTAGAACTTTTGCAAGAGAAAAAACGACTGACAGAAAATGTAATTGTCGTCTGTGAAACAGACAAGGAA
GTTGAACTCCCTGACCAAATTGGGAAATTAGAGCTGACCAGACAAAAAACTTACGGAATTTCTAAAATTTCAATTTATGA
ATTTTGA

Upstream 100 bases:

>100_bases
TCTGATTTGAGAAACTTATTTTTTTGTCAGTAAAATAATAAGAAAATTTTTACTGACAGAACCTTTAGACCAAGGCTTAC
AGGGAGATTCGGCTCTCCAT

Downstream 100 bases:

>100_bases
CTTTTACTGACAGAAATTCTGTCAGTAAATTAAGAAAGAAAAAAGTAATGACAGAAAAAATTGGACTCTTTACAGGAACT
TTTGACCCACTGACAAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKFCDIIIFMRVVSGNYGGRPLKTLAGKTTRPTTDKVKGAIFNMIGPYFEGGRVLDLFAGSGSLAIEAISRGMDHAILVE
KDRAAQQVILENIKMTKEPEKFQLLKMSAERVLSNLSETFDLVLLDPPYAKEQIVENLELLQEKKRLTENVIVVCETDKE
VELPDQIGKLELTRQKTYGISKISIYEF

Sequences:

>Translated_188_residues
MKFCDIIIFMRVVSGNYGGRPLKTLAGKTTRPTTDKVKGAIFNMIGPYFEGGRVLDLFAGSGSLAIEAISRGMDHAILVE
KDRAAQQVILENIKMTKEPEKFQLLKMSAERVLSNLSETFDLVLLDPPYAKEQIVENLELLQEKKRLTENVIVVCETDKE
VELPDQIGKLELTRQKTYGISKISIYEF
>Mature_188_residues
MKFCDIIIFMRVVSGNYGGRPLKTLAGKTTRPTTDKVKGAIFNMIGPYFEGGRVLDLFAGSGSLAIEAISRGMDHAILVE
KDRAAQQVILENIKMTKEPEKFQLLKMSAERVLSNLSETFDLVLLDPPYAKEQIVENLELLQEKKRLTENVIVVCETDKE
VELPDQIGKLELTRQKTYGISKISIYEF

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential) [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

Organism=Escherichia coli, GI1789875, Length=178, Percent_Identity=30.3370786516854, Blast_Score=101, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 21172; Mature: 21172

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFCDIIIFMRVVSGNYGGRPLKTLAGKTTRPTTDKVKGAIFNMIGPYFEGGRVLDLFAG
CCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEC
SGSLAIEAISRGMDHAILVEKDRAAQQVILENIKMTKEPEKFQLLKMSAERVLSNLSETF
CCCHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHE
DLVLLDPPYAKEQIVENLELLQEKKRLTENVIVVCETDKEVELPDQIGKLELTRQKTYGI
EEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHCCEEEEHHHHCCC
SKISIYEF
CEEEEECC
>Mature Secondary Structure
MKFCDIIIFMRVVSGNYGGRPLKTLAGKTTRPTTDKVKGAIFNMIGPYFEGGRVLDLFAG
CCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEC
SGSLAIEAISRGMDHAILVEKDRAAQQVILENIKMTKEPEKFQLLKMSAERVLSNLSETF
CCCHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHE
DLVLLDPPYAKEQIVENLELLQEKKRLTENVIVVCETDKEVELPDQIGKLELTRQKTYGI
EEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHCCEEEEHHHHCCC
SKISIYEF
CEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]