Click here to switch to the map view.

The map label for this gene is ywdE

Identifier: 15674142

GI number: 15674142

Start: 2236512

End: 2237369

Strand: Reverse

Name: ywdE

Synonym: L19959

Alternate gene names: 15674142

Gene position: 2237369-2236512 (Counterclockwise)

Preceding gene: 15674143

Following gene: 15674141

Centisome position: 94.58

GC content: 29.72

Gene sequence:

>858_bases
ATGGAAAAAAATTTAAAAATCGGAAAAATCATTGCTTTTATCAAAGAAACGAAGCATCTAAAATTAAAAGAAATGACTGG
TGGTTCTTTTTCAGAATCTCAGCTCGCAAAATTTGAAAAAGGAGAAACAGAGATTACGGTGGGTAAACTATTTACCGTCC
TAGAAAACTCAAATGTCTATTTAGATGAATTTCAAAACCTTTATAACGACTATGAACAATCAAATGAATACAAATTTCGT
CACAAGTTGGCGGTTGCTTATGCGCAAAAAAACATCGAGAAAATCATAGAAATTCATAATTTTTGGAAAGAAAAATCTCA
ACAAAATCCTGAAAATAAATACTATAAAATTAATGAAACAGTAGTTAAAACCAACTTAGTAATGGTTCAAAATGCAGAGG
ATATCAAAAAAGATACTGATCTTTTGATGAACTACCTTGAATCTGTCAGCGAATGGAGACGCTATGAACTGTGGGTTTTT
GGCAATTGTCTTCGACATTTTGATGATAATGCACTAAAGTATTACGGAATGCAAATTTTAGGAAAATCAAATTATTATCA
TTCAATTCATCTCAATCAACAGATCGTAATAAGAACATTTTTAAATCTTATTGATACTTGGTTACGTCGAGAAAACTTAA
TACAAGCTTTTAAATATATCAACCATTTAAAAGAAATAGGAATAAGTATCAATTTTTTCTATGAAAAAATTCTCTTTGAA
TATCACAAAGCTCATTATAAGGTATTGCAAAAACAAAACGGAGCGATAGAAGAAATGAAAAAACACGCGCAAACTCTTGC
AGATTATGGTTTCCCACTAGAAGCAAAGGTCCTTTTTGAAGAAATTGAAAAATTATAG

Upstream 100 bases:

>100_bases
GTCAGTAGTTTTTTCATCTAGTTTACAAGCTAAAAGCAAAGTTGTATAATAATTTCAAATAATTTAATAAATTTGGAATA
TATGACAAAGGGAAAATGAA

Downstream 100 bases:

>100_bases
GGCTTTGGCATATATTCCAAAAGAAAATTTCCACCCAATTTTATATGTTAAGATACAGATAATAAAAATTATCTGTATTT
TTTTATAGATTGGAGAAGTA

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MEKNLKIGKIIAFIKETKHLKLKEMTGGSFSESQLAKFEKGETEITVGKLFTVLENSNVYLDEFQNLYNDYEQSNEYKFR
HKLAVAYAQKNIEKIIEIHNFWKEKSQQNPENKYYKINETVVKTNLVMVQNAEDIKKDTDLLMNYLESVSEWRRYELWVF
GNCLRHFDDNALKYYGMQILGKSNYYHSIHLNQQIVIRTFLNLIDTWLRRENLIQAFKYINHLKEIGISINFFYEKILFE
YHKAHYKVLQKQNGAIEEMKKHAQTLADYGFPLEAKVLFEEIEKL

Sequences:

>Translated_285_residues
MEKNLKIGKIIAFIKETKHLKLKEMTGGSFSESQLAKFEKGETEITVGKLFTVLENSNVYLDEFQNLYNDYEQSNEYKFR
HKLAVAYAQKNIEKIIEIHNFWKEKSQQNPENKYYKINETVVKTNLVMVQNAEDIKKDTDLLMNYLESVSEWRRYELWVF
GNCLRHFDDNALKYYGMQILGKSNYYHSIHLNQQIVIRTFLNLIDTWLRRENLIQAFKYINHLKEIGISINFFYEKILFE
YHKAHYKVLQKQNGAIEEMKKHAQTLADYGFPLEAKVLFEEIEKL
>Mature_285_residues
MEKNLKIGKIIAFIKETKHLKLKEMTGGSFSESQLAKFEKGETEITVGKLFTVLENSNVYLDEFQNLYNDYEQSNEYKFR
HKLAVAYAQKNIEKIIEIHNFWKEKSQQNPENKYYKINETVVKTNLVMVQNAEDIKKDTDLLMNYLESVSEWRRYELWVF
GNCLRHFDDNALKYYGMQILGKSNYYHSIHLNQQIVIRTFLNLIDTWLRRENLIQAFKYINHLKEIGISINFFYEKILFE
YHKAHYKVLQKQNGAIEEMKKHAQTLADYGFPLEAKVLFEEIEKL

Specific function: Regulates the expression of glucosyltransferase (gtfG) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR010057 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 34070; Mature: 34070

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNLKIGKIIAFIKETKHLKLKEMTGGSFSESQLAKFEKGETEITVGKLFTVLENSNVY
CCCCCHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHCCCCCEEEHHHHHHHHCCCCEE
LDEFQNLYNDYEQSNEYKFRHKLAVAYAQKNIEKIIEIHNFWKEKSQQNPENKYYKINET
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCE
VVKTNLVMVQNAEDIKKDTDLLMNYLESVSEWRRYELWVFGNCLRHFDDNALKYYGMQIL
EEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEE
GKSNYYHSIHLNQQIVIRTFLNLIDTWLRRENLIQAFKYINHLKEIGISINFFYEKILFE
ECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
YHKAHYKVLQKQNGAIEEMKKHAQTLADYGFPLEAKVLFEEIEKL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MEKNLKIGKIIAFIKETKHLKLKEMTGGSFSESQLAKFEKGETEITVGKLFTVLENSNVY
CCCCCHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHCCCCCEEEHHHHHHHHCCCCEE
LDEFQNLYNDYEQSNEYKFRHKLAVAYAQKNIEKIIEIHNFWKEKSQQNPENKYYKINET
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCE
VVKTNLVMVQNAEDIKKDTDLLMNYLESVSEWRRYELWVFGNCLRHFDDNALKYYGMQIL
EEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEE
GKSNYYHSIHLNQQIVIRTFLNLIDTWLRRENLIQAFKYINHLKEIGISINFFYEKILFE
ECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
YHKAHYKVLQKQNGAIEEMKKHAQTLADYGFPLEAKVLFEEIEKL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1534326 [H]