| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is gltX
Identifier: 15674035
GI number: 15674035
Start: 2140195
End: 2141646
Strand: Reverse
Name: gltX
Synonym: L0349
Alternate gene names: 15674035
Gene position: 2141646-2140195 (Counterclockwise)
Preceding gene: 15674036
Following gene: 30024072
Centisome position: 90.53
GC content: 37.67
Gene sequence:
>1452_bases ATGAATAAAAAAATCCGCGTCCGTTACGCACCATCACCAACAGGACTTTTGCATATCGGGAATGCTCGTACAGCCCTTTT TAACTATCTTTTTGCCCGTCATCACGGGGGAGATTTTATCATCCGTATTGAAGATACAGACCGTGAACGTCACGTAGAAG ATGGTGAGCGTTCACAACTTGAAAACCTTCGTTGGTTGGGAATGGATTGGGATGAAAGTCCTGAAACACATGAAAACTAC CGTCAATCAGAACGTTTGCCTTTATATCAAAAATATATTGACCAATTGTTGACTGAAGGAAAAGCTTATTATTCTTATAA AACGCCAGAAGAACTTGAAGCTGACCATGCGAAACAAGAAGCGGCAGGAATTGCTCCACACTATATTAACGAATATGCTG GCATGAGTGATGATGAAAAAGCAGCTTATATCGCGGAGCGTAAAGCGCAAAATATTGAACCGGTTGTTCGTATTTCTGTT GATGAAAAAGCAATTTATAAATGGAATGATATTGTTAAAGGCGACATTGAATTTGAAGGTAAAAACATCGGTGGAGATTG GGTAATCCAAAAACGTGATGGTTACCCAACTTACAATTTTGCTGTTGTTGTTGATGACCATGATATGCAAATCTCACATG TTATCCGTGGCGATGACCATATTGCCAATACACCAAAACAATTAGTTGTTTACGATGCTTTGGGTTGGGAAGCACCACAA TTTGGTCACATGACTTTGATTATTAATTCTGAAACTGGGAAAAAATTATCAAAACGTGACACAAATACACTTCAGTTTAT TGAAGACTACCGTAAAAAAGGTTACATGTCTGATGCCATTTTCAACTTTATTGCACTTTTGGGCTGGAATCCTGGTGGAG AAAAAGAAATTTTCTCTCGTGAAGAATTAATTGAACTTTTTGATGAACATCGTTTGTCTAAATCACCAGCAGCCTTTGAC CAAAAGAAATTGGACTGGTTGGATAATGAATACATCAAAAATGCTGATTTTGCTAAAGTATTTGAATTGACAAAACCATT CCTTGTTGCTGCTAATCGCTTTGATGAACGTGCTGAGGAACTGGTTAAACTTTATCAACCACAAATGAAATCAGCAGATG AAATTGTTGAATTAACAGACCTTTTCTATGGAGATTTCCCAGAATTGACTGATGAAGCTCGTGAAATGTTGGCTGCTGAA ACAACACCATTAGCTTTGAGTACTTTCCGTGCAAAATTGGCTGAGCTTCCTGAAAATGATTTTACAGTGGAAAATATTTT CCCACTCTTTAAAGCGACTCAAAAAGAAACTGGCGTAAAAGGTAAAATGCTTTGGATGCCAATTCGTATTGCAGCTTCAG GTTCAATGCATGGTCCAGAATTACCAGAAACAATTGCACTTCTTGGAAAAGAAAAAGTATTGGCTCATTTGGACGCTGCT TTAAATAAATAA
Upstream 100 bases:
>100_bases TAGAGGTGATTGTTAGAGTAGTTTAGGCTATTTAAAACCAAGAACGATTCATTTCTTACAGAAAAGAAGTGAACGAATTA ATGAGGAGAATTGGATTAAT
Downstream 100 bases:
>100_bases TATAATAAAAAGACGCCGTGTGGCGTCTTTTTATTAAACCAAAATAGAACACTCAGACATTCAAATGGTATAAAATAAGG AGATAAACTAACGAAAAGAG
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MNKKIRVRYAPSPTGLLHIGNARTALFNYLFARHHGGDFIIRIEDTDRERHVEDGERSQLENLRWLGMDWDESPETHENY RQSERLPLYQKYIDQLLTEGKAYYSYKTPEELEADHAKQEAAGIAPHYINEYAGMSDDEKAAYIAERKAQNIEPVVRISV DEKAIYKWNDIVKGDIEFEGKNIGGDWVIQKRDGYPTYNFAVVVDDHDMQISHVIRGDDHIANTPKQLVVYDALGWEAPQ FGHMTLIINSETGKKLSKRDTNTLQFIEDYRKKGYMSDAIFNFIALLGWNPGGEKEIFSREELIELFDEHRLSKSPAAFD QKKLDWLDNEYIKNADFAKVFELTKPFLVAANRFDERAEELVKLYQPQMKSADEIVELTDLFYGDFPELTDEAREMLAAE TTPLALSTFRAKLAELPENDFTVENIFPLFKATQKETGVKGKMLWMPIRIAASGSMHGPELPETIALLGKEKVLAHLDAA LNK
Sequences:
>Translated_483_residues MNKKIRVRYAPSPTGLLHIGNARTALFNYLFARHHGGDFIIRIEDTDRERHVEDGERSQLENLRWLGMDWDESPETHENY RQSERLPLYQKYIDQLLTEGKAYYSYKTPEELEADHAKQEAAGIAPHYINEYAGMSDDEKAAYIAERKAQNIEPVVRISV DEKAIYKWNDIVKGDIEFEGKNIGGDWVIQKRDGYPTYNFAVVVDDHDMQISHVIRGDDHIANTPKQLVVYDALGWEAPQ FGHMTLIINSETGKKLSKRDTNTLQFIEDYRKKGYMSDAIFNFIALLGWNPGGEKEIFSREELIELFDEHRLSKSPAAFD QKKLDWLDNEYIKNADFAKVFELTKPFLVAANRFDERAEELVKLYQPQMKSADEIVELTDLFYGDFPELTDEAREMLAAE TTPLALSTFRAKLAELPENDFTVENIFPLFKATQKETGVKGKMLWMPIRIAASGSMHGPELPETIALLGKEKVLAHLDAA LNK >Mature_483_residues MNKKIRVRYAPSPTGLLHIGNARTALFNYLFARHHGGDFIIRIEDTDRERHVEDGERSQLENLRWLGMDWDESPETHENY RQSERLPLYQKYIDQLLTEGKAYYSYKTPEELEADHAKQEAAGIAPHYINEYAGMSDDEKAAYIAERKAQNIEPVVRISV DEKAIYKWNDIVKGDIEFEGKNIGGDWVIQKRDGYPTYNFAVVVDDHDMQISHVIRGDDHIANTPKQLVVYDALGWEAPQ FGHMTLIINSETGKKLSKRDTNTLQFIEDYRKKGYMSDAIFNFIALLGWNPGGEKEIFSREELIELFDEHRLSKSPAAFD QKKLDWLDNEYIKNADFAKVFELTKPFLVAANRFDERAEELVKLYQPQMKSADEIVELTDLFYGDFPELTDEAREMLAAE TTPLALSTFRAKLAELPENDFTVENIFPLFKATQKETGVKGKMLWMPIRIAASGSMHGPELPETIALLGKEKVLAHLDAA LNK
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=323, Percent_Identity=37.7708978328173, Blast_Score=222, Evalue=5e-58, Organism=Homo sapiens, GI62241042, Length=236, Percent_Identity=25, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1788743, Length=483, Percent_Identity=38.0952380952381, Blast_Score=317, Evalue=1e-87, Organism=Escherichia coli, GI226510925, Length=253, Percent_Identity=31.6205533596838, Blast_Score=117, Evalue=2e-27, Organism=Caenorhabditis elegans, GI71993394, Length=490, Percent_Identity=31.6326530612245, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17543332, Length=298, Percent_Identity=23.8255033557047, Blast_Score=68, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324540, Length=484, Percent_Identity=31.6115702479339, Blast_Score=227, Evalue=3e-60, Organism=Saccharomyces cerevisiae, GI6321192, Length=217, Percent_Identity=26.2672811059908, Blast_Score=78, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6324742, Length=312, Percent_Identity=24.0384615384615, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24665321, Length=509, Percent_Identity=30.4518664047151, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI17864488, Length=300, Percent_Identity=25.6666666666667, Blast_Score=81, Evalue=2e-15,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_LACLA (Q9CDZ7)
Other databases:
- EMBL: AE005176 - PIR: E86881 - RefSeq: NP_268210.1 - ProteinModelPortal: Q9CDZ7 - SMR: Q9CDZ7 - GeneID: 1115730 - GenomeReviews: AE005176_GR - KEGG: lla:L0349 - NMPDR: fig|272623.1.peg.2108 - HOGENOM: HBG628189 - OMA: MANKIRV - ProtClustDB: PRK01406 - BioCyc: LLAC272623:L0349-MONOMER - BRENDA: 6.1.1.17 - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 55462; Mature: 55462
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 258-258
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKIRVRYAPSPTGLLHIGNARTALFNYLFARHHGGDFIIRIEDTDRERHVEDGERSQL CCCCEEEEECCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCHHCCCCCCHHHH ENLRWLGMDWDESPETHENYRQSERLPLYQKYIDQLLTEGKAYYSYKTPEELEADHAKQE HCCEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHH AAGIAPHYINEYAGMSDDEKAAYIAERKAQNIEPVVRISVDEKAIYKWNDIVKGDIEFEG HCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEECCHHEEECCCEEECEEEECC KNIGGDWVIQKRDGYPTYNFAVVVDDHDMQISHVIRGDDHIANTPKQLVVYDALGWEAPQ CCCCCCEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCHHCCCCCCEEEEECCCCCCCC FGHMTLIINSETGKKLSKRDTNTLQFIEDYRKKGYMSDAIFNFIALLGWNPGGEKEIFSR CCCEEEEEECCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHH EELIELFDEHRLSKSPAAFDQKKLDWLDNEYIKNADFAKVFELTKPFLVAANRFDERAEE HHHHHHHHHHCCCCCCCCCCHHHHHHHCHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHH LVKLYQPQMKSADEIVELTDLFYGDFPELTDEAREMLAAETTPLALSTFRAKLAELPEND HHHHHCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC FTVENIFPLFKATQKETGVKGKMLWMPIRIAASGSMHGPELPETIALLGKEKVLAHLDAA CCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH LNK HCC >Mature Secondary Structure MNKKIRVRYAPSPTGLLHIGNARTALFNYLFARHHGGDFIIRIEDTDRERHVEDGERSQL CCCCEEEEECCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCHHCCCCCCHHHH ENLRWLGMDWDESPETHENYRQSERLPLYQKYIDQLLTEGKAYYSYKTPEELEADHAKQE HCCEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHH AAGIAPHYINEYAGMSDDEKAAYIAERKAQNIEPVVRISVDEKAIYKWNDIVKGDIEFEG HCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEECCHHEEECCCEEECEEEECC KNIGGDWVIQKRDGYPTYNFAVVVDDHDMQISHVIRGDDHIANTPKQLVVYDALGWEAPQ CCCCCCEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCHHCCCCCCEEEEECCCCCCCC FGHMTLIINSETGKKLSKRDTNTLQFIEDYRKKGYMSDAIFNFIALLGWNPGGEKEIFSR CCCEEEEEECCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHH EELIELFDEHRLSKSPAAFDQKKLDWLDNEYIKNADFAKVFELTKPFLVAANRFDERAEE HHHHHHHHHHCCCCCCCCCCHHHHHHHCHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHH LVKLYQPQMKSADEIVELTDLFYGDFPELTDEAREMLAAETTPLALSTFRAKLAELPEND HHHHHCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC FTVENIFPLFKATQKETGVKGKMLWMPIRIAASGSMHGPELPETIALLGKEKVLAHLDAA CCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH LNK HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11337471