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The map label for this gene is yvdE

Identifier: 15674032

GI number: 15674032

Start: 2136974

End: 2137684

Strand: Direct

Name: yvdE

Synonym: L120396

Alternate gene names: 15674032

Gene position: 2136974-2137684 (Clockwise)

Preceding gene: 15674031

Following gene: 15674033

Centisome position: 90.34

GC content: 37.83

Gene sequence:

>711_bases
ATGGCAATTATTGGAATTCTTGGAACTCCTTACAATACAGTTGAACAATCCCCTTTTTGGTGGAACAAAGTAAGCTATAC
TCGTCAATCATTTATTGATGTTTTTCAGGATTTAGGTCATACTGTGATTATTCTTCCTGTTGACAAAACCGAAAATATAA
AAAATTACCTGACACTGGTAGATAAAATTGTACTGACTGGTGGGGCAGATGTCAGTCCTTATCTATATGGTGAGGAGCCT
AATGCTAAATTAGGAACAACTGATCCGATTCGTGACCGTTTTGAGCTTGCCACAATCAAAGCTGCTCTAGAAGCAAATAA
ACCTATTTTGGGCGTTTGTCGTGGCCTACAGTTACTCAATGTTTATTTTGGCGGAAGGCTTTATCAAGACTTGAGTCAAA
CTTCAAGTCAGATAAAACATCTCCAAAGTCCAACACCACAAGAAATTCCAACTCATCATATTAGTGTTGAACAAGAAAGT
GCCTTGGGCTTCTTGCCTGAAAATTATATGGTTAATTCTTTCCATCATCAAGTCATTAAAGATTTGGGCCAAGGCTTGAC
GGCCATTGCTCATGGAAACGATGGCTTAGTTGAAGCGATTGAAAATAAAGAAAAACATGTGCTTGCTGTCCAATGGCACC
CAGAATGTACTTGGGAAACTGAGCATTTTGATAAGAAAATTTTTGAAATTTTCGCTAACGGAACCATATAA

Upstream 100 bases:

>100_bases
GACTTTGAACATACGGTTCGTGATAATCGTAAAGTGACTTACGAGATTGATTTATCTCAATCTAAACTCATTATTCCTAT
TGAAAGTGTGAAAAAATAAG

Downstream 100 bases:

>100_bases
AAGTTAAAAAACCGTCATAAATCTTTTTTATGGTGGTTTTTTTAAGATTATGTTAATATTATGTCTATATTAAAAGTCAG
CTCACTCGTAACCAACTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MAIIGILGTPYNTVEQSPFWWNKVSYTRQSFIDVFQDLGHTVIILPVDKTENIKNYLTLVDKIVLTGGADVSPYLYGEEP
NAKLGTTDPIRDRFELATIKAALEANKPILGVCRGLQLLNVYFGGRLYQDLSQTSSQIKHLQSPTPQEIPTHHISVEQES
ALGFLPENYMVNSFHHQVIKDLGQGLTAIAHGNDGLVEAIENKEKHVLAVQWHPECTWETEHFDKKIFEIFANGTI

Sequences:

>Translated_236_residues
MAIIGILGTPYNTVEQSPFWWNKVSYTRQSFIDVFQDLGHTVIILPVDKTENIKNYLTLVDKIVLTGGADVSPYLYGEEP
NAKLGTTDPIRDRFELATIKAALEANKPILGVCRGLQLLNVYFGGRLYQDLSQTSSQIKHLQSPTPQEIPTHHISVEQES
ALGFLPENYMVNSFHHQVIKDLGQGLTAIAHGNDGLVEAIENKEKHVLAVQWHPECTWETEHFDKKIFEIFANGTI
>Mature_235_residues
AIIGILGTPYNTVEQSPFWWNKVSYTRQSFIDVFQDLGHTVIILPVDKTENIKNYLTLVDKIVLTGGADVSPYLYGEEPN
AKLGTTDPIRDRFELATIKAALEANKPILGVCRGLQLLNVYFGGRLYQDLSQTSSQIKHLQSPTPQEIPTHHISVEQESA
LGFLPENYMVNSFHHQVIKDLGQGLTAIAHGNDGLVEAIENKEKHVLAVQWHPECTWETEHFDKKIFEIFANGTI

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain

Homologues:

Organism=Escherichia coli, GI87081871, Length=215, Percent_Identity=35.3488372093023, Blast_Score=103, Evalue=9e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVDE_LACLA (Q9CE00)

Other databases:

- EMBL:   AE005176
- PIR:   B86881
- RefSeq:   NP_268207.1
- ProteinModelPortal:   Q9CE00
- GeneID:   1115726
- GenomeReviews:   AE005176_GR
- KEGG:   lla:L120396
- NMPDR:   fig|272623.1.peg.2104
- HOGENOM:   HBG668169
- OMA:   MTHKYIT
- ProtClustDB:   CLSK698088
- BioCyc:   LLAC272623:L120396-MONOMER
- InterPro:   IPR017926
- InterPro:   IPR011697

Pfam domain/function: PF07722 Peptidase_C26

EC number: NA

Molecular weight: Translated: 26511; Mature: 26380

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS51273 GATASE_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIIGILGTPYNTVEQSPFWWNKVSYTRQSFIDVFQDLGHTVIILPVDKTENIKNYLTLV
CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH
DKIVLTGGADVSPYLYGEEPNAKLGTTDPIRDRFELATIKAALEANKPILGVCRGLQLLN
HHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VYFGGRLYQDLSQTSSQIKHLQSPTPQEIPTHHISVEQESALGFLPENYMVNSFHHQVIK
HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHH
DLGQGLTAIAHGNDGLVEAIENKEKHVLAVQWHPECTWETEHFDKKIFEIFANGTI
HHCCCEEEEECCCCHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AIIGILGTPYNTVEQSPFWWNKVSYTRQSFIDVFQDLGHTVIILPVDKTENIKNYLTLV
EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH
DKIVLTGGADVSPYLYGEEPNAKLGTTDPIRDRFELATIKAALEANKPILGVCRGLQLLN
HHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VYFGGRLYQDLSQTSSQIKHLQSPTPQEIPTHHISVEQESALGFLPENYMVNSFHHQVIK
HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHH
DLGQGLTAIAHGNDGLVEAIENKEKHVLAVQWHPECTWETEHFDKKIFEIFANGTI
HHCCCEEEEECCCCHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471