Definition Lactococcus lactis subsp. lactis Il1403, complete genome.
Accession NC_002662
Length 2,365,589

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The map label for this gene is yvdB

Identifier: 15674028

GI number: 15674028

Start: 2131679

End: 2132458

Strand: Reverse

Name: yvdB

Synonym: L115113

Alternate gene names: NA

Gene position: 2132458-2131679 (Counterclockwise)

Preceding gene: 15674030

Following gene: 15674027

Centisome position: 90.14

GC content: 34.49

Gene sequence:

>780_bases
ATGAGCGAGATTATAAATCATATTACCGCTTTTCAACCAGTCTATCGTGTGCTTAACCGTGAAGAAAATTTAGATTTCTA
CCGTGAAGTGCTTGGATTTAAGGTCTTGGTAGAAGAAGGCGCAATGGTATGGCTTGGTGGGCATGAAGCGAAAAAAGATC
GGTTTCAATTAGAAGAATCACCAGGTTTTCGTCCTGTTGAAGGATTGAAAAAACACGGGCAAACGGTGATCAAAGCTAAT
TCATCTGAGATTGAGCAATTAATTGTTCGTAACTTGGACAAGATTTCTAAGGTCTATAAAGGAAAAAACGGCTTTGCTTT
TTCAGCACTTTCGCCTGAAGCAGAACTTTTTTTGGTAACATCAGATTTACTGACAGATTTATCATCACTGACAGAAATTG
ATAAATCAGAAATTGAACTTGAGGAAGATAAAACTTTTAAAGGTTTGTCAGATTTTGAAATTATAGCAATGGATTTGAAT
GTTGCTGACCAATCAATTATTGAATTTTATGAATCAGTTTTTGGTCTTAAAGCAATCAATAACCAAATTGAATTTCCTTT
TGTAACTTTGACTTTTAGTGTTGAAGAAAGCGAAGATTTAGCTGCAGGAACCGATGAAGTACTTGACCTTGAGTTTTTAG
TGTTCATGATTGATAAAGATTTTGATTTGAAAGATTTTGCTCATCAATTTTCTGATGTGGACGGAACATATTTGGATGGC
TCAGCTAAAACTTTTTCATTAGAAGTTCCTGACCATGTAGAACTTTGGTTTGTAAAATAA

Upstream 100 bases:

>100_bases
TGTAGAAAGGAAAACTAAAAGATATAAATCGTTGATAATTTCCTTGAAATTTGCGAAAATAAGAGATAGTTATTTGTAAA
TGTAATCAATGGAGGCTAAA

Downstream 100 bases:

>100_bases
TAATTTTAAAAAAACTTGTTAATTTTTGACAAGTTTTTTTACTCAAAATAAATCAGAAACGAAGGTTGAAACATGAAAAA
TCAACAAGAATTTTTAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: CppA Protein; Proteinase; Methyl-Accepting Chemotaxis Protein; Ypothetical Protein SMU.

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MSEIINHITAFQPVYRVLNREENLDFYREVLGFKVLVEEGAMVWLGGHEAKKDRFQLEESPGFRPVEGLKKHGQTVIKAN
SSEIEQLIVRNLDKISKVYKGKNGFAFSALSPEAELFLVTSDLLTDLSSLTEIDKSEIELEEDKTFKGLSDFEIIAMDLN
VADQSIIEFYESVFGLKAINNQIEFPFVTLTFSVEESEDLAAGTDEVLDLEFLVFMIDKDFDLKDFAHQFSDVDGTYLDG
SAKTFSLEVPDHVELWFVK

Sequences:

>Translated_259_residues
MSEIINHITAFQPVYRVLNREENLDFYREVLGFKVLVEEGAMVWLGGHEAKKDRFQLEESPGFRPVEGLKKHGQTVIKAN
SSEIEQLIVRNLDKISKVYKGKNGFAFSALSPEAELFLVTSDLLTDLSSLTEIDKSEIELEEDKTFKGLSDFEIIAMDLN
VADQSIIEFYESVFGLKAINNQIEFPFVTLTFSVEESEDLAAGTDEVLDLEFLVFMIDKDFDLKDFAHQFSDVDGTYLDG
SAKTFSLEVPDHVELWFVK
>Mature_258_residues
SEIINHITAFQPVYRVLNREENLDFYREVLGFKVLVEEGAMVWLGGHEAKKDRFQLEESPGFRPVEGLKKHGQTVIKANS
SEIEQLIVRNLDKISKVYKGKNGFAFSALSPEAELFLVTSDLLTDLSSLTEIDKSEIELEEDKTFKGLSDFEIIAMDLNV
ADQSIIEFYESVFGLKAINNQIEFPFVTLTFSVEESEDLAAGTDEVLDLEFLVFMIDKDFDLKDFAHQFSDVDGTYLDGS
AKTFSLEVPDHVELWFVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29430; Mature: 29299

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIINHITAFQPVYRVLNREENLDFYREVLGFKVLVEEGAMVWLGGHEAKKDRFQLEES
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEECCCEEEECCCCCCHHHHEECCC
PGFRPVEGLKKHGQTVIKANSSEIEQLIVRNLDKISKVYKGKNGFAFSALSPEAELFLVT
CCCCCHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEE
SDLLTDLSSLTEIDKSEIELEEDKTFKGLSDFEIIAMDLNVADQSIIEFYESVFGLKAIN
HHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHC
NQIEFPFVTLTFSVEESEDLAAGTDEVLDLEFLVFMIDKDFDLKDFAHQFSDVDGTYLDG
CCCCCCEEEEEEEECCCCCCCCCCCHHHHHEEEEEEECCCCCHHHHHHHHCCCCCEEECC
SAKTFSLEVPDHVELWFVK
CCEEEEEECCCCEEEEEEC
>Mature Secondary Structure 
SEIINHITAFQPVYRVLNREENLDFYREVLGFKVLVEEGAMVWLGGHEAKKDRFQLEES
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEECCCEEEECCCCCCHHHHEECCC
PGFRPVEGLKKHGQTVIKANSSEIEQLIVRNLDKISKVYKGKNGFAFSALSPEAELFLVT
CCCCCHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEE
SDLLTDLSSLTEIDKSEIELEEDKTFKGLSDFEIIAMDLNVADQSIIEFYESVFGLKAIN
HHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHC
NQIEFPFVTLTFSVEESEDLAAGTDEVLDLEFLVFMIDKDFDLKDFAHQFSDVDGTYLDG
CCCCCCEEEEEEEECCCCCCCCCCCHHHHHEEEEEEECCCCCHHHHHHHHCCCCCEEECC
SAKTFSLEVPDHVELWFVK
CCEEEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA