| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is snf
Identifier: 15674024
GI number: 15674024
Start: 2120587
End: 2123691
Strand: Reverse
Name: snf
Synonym: L104021
Alternate gene names: NA
Gene position: 2123691-2120587 (Counterclockwise)
Preceding gene: 15674025
Following gene: 15674023
Centisome position: 89.77
GC content: 34.01
Gene sequence:
>3105_bases ATGAGTAGAATGATGCCGGCACGAGTGCGAAGTGAGGGAATCGCCCTCTATGCGAAAGGCTTCTTAAATGACCCAATTGA AACTGATTTTAAACTAACAGCAGAAATTGATGGTGAAGAGGTAAGTTATGACCTAGATGGTGCGCAAGATAGTTGTACTT GTGCAGTCTTTCAACAAAACCACCGCTATTGCAAACACATTGCAGCGATAGAAGAGTATCTAAAAAATCAAGATAAAGGA AGTCAGGAAACAAAAGATAAAGAAATCAAAGGAGCTGAACGAGCGCTTTTTGGTGAAAATGTTGCTTTTTTAGATGCTGT AAATGGTGAGACACAATTAAATTTCAATACAGACCAATATTCTATCGAAGTTCAAATTGAGGATAATAGTCAGCTTTATG ATTATTTTTCAATGGATTATTTTTTGTATTTTGATTTAAAATTAAGAAGTAAAAATTTGGGCCGCTCATACGTTATTAAA GATATTCCTTATTTTCTACGCGCTTTAAAAAATTATAGTCAGTATTCTTTGGGTTCTCTACACTATATTGACCTCTTTTT TGATAATTTTGATGAAGCAAGTCAAGAATTTTTAACTTTTCTTTTAAAAATTGATAGTAAATCCGATGAAGCACTTACCA AATCCTTATATATTAAAAATGGGCGTTATCTTAATATTCCATTTTTATTCCTTGAAGAAGCAATGGACTTAGTTTCAGCT TTAGAGAATTATCAACTTCAGATTACAGGTAGAACGGTCAATTATTTTACATTTATAGCCCTTGATAATGATTCGGAGAT TTTTAAATTTAAGGTTGAAAGTCAGCAAGATTATATCGAGTTGAAACTCTACAGTGAGGATTATCATAATTTTTATGATT ATTCACTTCTTTATGCCAATAATGTATTTTATAAACTCAATCAAGAACAACGGCGTCTGCTCCTTGTTTTAGATAAGCAA TTTGCTAAAAAATCACAAATTAAATTTTCATATGCTGATAAGGATAAATTAGCTCAGGCTCTTCAACAATTATCAACTTT GGGAGAGATTGAAGCGCCAGACCATTTTGTTGTCAGACCTTTTGATGCTAAATTTACTTTTGATTTGTTGGAAGATCAGA CCATTAGTTTGGCAATGACTTTTGATTATGGAAGTTTCTCAATAGATAGTTTCCACGATTTAGAAACCCTAGAATTTTCA AGAGATTTGCGTAAAGAGCAAAAGATTTTTGCACTGATGGAACGTTTGCAGTTTGCTAAGGCTTTTAATTCGTCATTAAA TATTCCAGAAAATTTATCAGAGCATTTCTTTTTGAAAATCTTACCTGCTTTTCAAAAACTTGGTCAGATTGAACTATCGC CAACTTTAAGAAATATGAGAATGGATGAAGTTCCTGAAATTCATATTGATAGTCAGGGAGGACTCTTAGATATTTCCTTT GATATTCCTCAGGTTGAAGATGGTGAATTTGCAAATGTTATTGCAAAATTACAAGAAAATGCTGAATTTTATATCAGTGA AAGCGGGAAATTTTATCATTTTAATGAAAAATTTGACCGCTTGAAAGCTGCATTAAACGAACTTGACGACCAATTTGTTA TTCAAGGAAGCAGTTTACATGTTAATATTAATCGAAGTTTCCAAATTTCTAAAATATTTGAAAATATTGGTGGAGCTTCC TTCTCTGAAAAATTTAAATCACTCTATCAACACTTGACGCATCCTGAAGAGTTTCCTTACGAGAAACCAGAACATATTAA GGCATCCTTGCGTTCTTATCAGGAAACGGGTGTTCGCTGGATGAGTATGCTCTCTCATTATAATTTGGGAGGAATTCTTG CTGATGACATGGGATTAGGTAAAACGGTCCAAGCGATTACTTTTATTCTTTCTAATCTGAAAAAAGATGAGAGTGTTCTA ATTACCGCACCAGCTAGTCTTACTTATAACTGGGCAAGTGAATTTGAAAAATTTACTGATGAGATTGATTTTGCTGTTAT TGACGGGACAAAAGCCGAGCGAAGTAAAGAAATTCAAGAAAAACATCAAATTTATATCACGAGTTATGGTAGCTTCTTGA AAGATTTTGAAGACTACCAGGATAAAAAATTGAATTACTTACTTTTGGATGAAGCTCAAGTTGTCAAAAATTATAGTAGT AAAACCAATAAATCACTATCTGCTCTGAATGTTGAACATACCTTTGCCCTTTCAGGAACACCACTAGAAAATCGAATTGA AGAAATTTGGGCCATTTTCCAAGTGGTGATGCCAGGCTTTTTACCAAAACGTGAAAAATTCAATAAGATGGAACCATCTG TTATTTCAAGATTGATACAGCCTTTCATTATGCGTCGTAAAAAAGAAGATGTGCTTGAAGAACTTCCAGAAAAAATGGAA ATTACGGTCTATAACCAATTAGCTGATGATCAAAAAGTAATCTATTTAGCACAACTCGAATTGATGCAAAAACAAGTTTT AGAAATGGATAGTGCGGCTTTATCACGTTCAAGAATTGAAATTCTGGCAGGAATTACACGACTTAGACAAATTTGTAATA CACCAGCATTATTTATGGATGACTATAAAGGAAGTTCTGGGAAACTTGAACGTTTACGAGAATTATTGGCGCAAATTAAA GATTCAGGCCATCGTCCTTTGATTTTCTCTCAATTTACAAAAGTTTTTCCACATATTGAAAAATTGATGGAAGAACAAGA AATGACCGCTTATAAACTGACTGGTTCTACTCCAATTAAAGATCGACTTTCAATGGTTCAAGCCTTTAATGCTGGTAGCC GTGATGCATTCTTAGTTTCGCTAAAAGCCGGTGGGGTTGGGCTTAATTTAACCAGTGCTGATGTCGTCATTTTGGTTGAC TTGTGGTGGAACCCAGCTGTTGAAGAACAGGCTATTGCGCGTGCCCATCGGATGGGACAAAAAAATACGGTAGAAGTCAT TCGCTTGATTACCAAAGGTACAATTGAAGAAAAAATTATGGAAATCCAAGAGCGTAAAAAGGATTTAATTGCTAATGTTT TAGAAGGCGATACAGTGGATAAAGTCCTCAGTGAAGCAGAAATTCGTGAAATTCTTGGAGTATAG
Upstream 100 bases:
>100_bases AAATTGATAAGAAAGAGGAAAACTCTAGCAAAAAAATGGTAATTATGGTATAATATACGCAAAATTTTGAAATAATTGAT TCGAGGAAAAATATAAAAAT
Downstream 100 bases:
>100_bases CTTTAAAAAACTTAGAAATTAAGCTATAATGGATATTGAAACGGTTATCTTAGAATCTAAATCTTGTTTTGATATTTTAT CTAGTAGAAGAAAAATTCTA
Product: SWI/SNF family helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1034; Mature: 1033
Protein sequence:
>1034_residues MSRMMPARVRSEGIALYAKGFLNDPIETDFKLTAEIDGEEVSYDLDGAQDSCTCAVFQQNHRYCKHIAAIEEYLKNQDKG SQETKDKEIKGAERALFGENVAFLDAVNGETQLNFNTDQYSIEVQIEDNSQLYDYFSMDYFLYFDLKLRSKNLGRSYVIK DIPYFLRALKNYSQYSLGSLHYIDLFFDNFDEASQEFLTFLLKIDSKSDEALTKSLYIKNGRYLNIPFLFLEEAMDLVSA LENYQLQITGRTVNYFTFIALDNDSEIFKFKVESQQDYIELKLYSEDYHNFYDYSLLYANNVFYKLNQEQRRLLLVLDKQ FAKKSQIKFSYADKDKLAQALQQLSTLGEIEAPDHFVVRPFDAKFTFDLLEDQTISLAMTFDYGSFSIDSFHDLETLEFS RDLRKEQKIFALMERLQFAKAFNSSLNIPENLSEHFFLKILPAFQKLGQIELSPTLRNMRMDEVPEIHIDSQGGLLDISF DIPQVEDGEFANVIAKLQENAEFYISESGKFYHFNEKFDRLKAALNELDDQFVIQGSSLHVNINRSFQISKIFENIGGAS FSEKFKSLYQHLTHPEEFPYEKPEHIKASLRSYQETGVRWMSMLSHYNLGGILADDMGLGKTVQAITFILSNLKKDESVL ITAPASLTYNWASEFEKFTDEIDFAVIDGTKAERSKEIQEKHQIYITSYGSFLKDFEDYQDKKLNYLLLDEAQVVKNYSS KTNKSLSALNVEHTFALSGTPLENRIEEIWAIFQVVMPGFLPKREKFNKMEPSVISRLIQPFIMRRKKEDVLEELPEKME ITVYNQLADDQKVIYLAQLELMQKQVLEMDSAALSRSRIEILAGITRLRQICNTPALFMDDYKGSSGKLERLRELLAQIK DSGHRPLIFSQFTKVFPHIEKLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRDAFLVSLKAGGVGLNLTSADVVILVD LWWNPAVEEQAIARAHRMGQKNTVEVIRLITKGTIEEKIMEIQERKKDLIANVLEGDTVDKVLSEAEIREILGV
Sequences:
>Translated_1034_residues MSRMMPARVRSEGIALYAKGFLNDPIETDFKLTAEIDGEEVSYDLDGAQDSCTCAVFQQNHRYCKHIAAIEEYLKNQDKG SQETKDKEIKGAERALFGENVAFLDAVNGETQLNFNTDQYSIEVQIEDNSQLYDYFSMDYFLYFDLKLRSKNLGRSYVIK DIPYFLRALKNYSQYSLGSLHYIDLFFDNFDEASQEFLTFLLKIDSKSDEALTKSLYIKNGRYLNIPFLFLEEAMDLVSA LENYQLQITGRTVNYFTFIALDNDSEIFKFKVESQQDYIELKLYSEDYHNFYDYSLLYANNVFYKLNQEQRRLLLVLDKQ FAKKSQIKFSYADKDKLAQALQQLSTLGEIEAPDHFVVRPFDAKFTFDLLEDQTISLAMTFDYGSFSIDSFHDLETLEFS RDLRKEQKIFALMERLQFAKAFNSSLNIPENLSEHFFLKILPAFQKLGQIELSPTLRNMRMDEVPEIHIDSQGGLLDISF DIPQVEDGEFANVIAKLQENAEFYISESGKFYHFNEKFDRLKAALNELDDQFVIQGSSLHVNINRSFQISKIFENIGGAS FSEKFKSLYQHLTHPEEFPYEKPEHIKASLRSYQETGVRWMSMLSHYNLGGILADDMGLGKTVQAITFILSNLKKDESVL ITAPASLTYNWASEFEKFTDEIDFAVIDGTKAERSKEIQEKHQIYITSYGSFLKDFEDYQDKKLNYLLLDEAQVVKNYSS KTNKSLSALNVEHTFALSGTPLENRIEEIWAIFQVVMPGFLPKREKFNKMEPSVISRLIQPFIMRRKKEDVLEELPEKME ITVYNQLADDQKVIYLAQLELMQKQVLEMDSAALSRSRIEILAGITRLRQICNTPALFMDDYKGSSGKLERLRELLAQIK DSGHRPLIFSQFTKVFPHIEKLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRDAFLVSLKAGGVGLNLTSADVVILVD LWWNPAVEEQAIARAHRMGQKNTVEVIRLITKGTIEEKIMEIQERKKDLIANVLEGDTVDKVLSEAEIREILGV >Mature_1033_residues SRMMPARVRSEGIALYAKGFLNDPIETDFKLTAEIDGEEVSYDLDGAQDSCTCAVFQQNHRYCKHIAAIEEYLKNQDKGS QETKDKEIKGAERALFGENVAFLDAVNGETQLNFNTDQYSIEVQIEDNSQLYDYFSMDYFLYFDLKLRSKNLGRSYVIKD IPYFLRALKNYSQYSLGSLHYIDLFFDNFDEASQEFLTFLLKIDSKSDEALTKSLYIKNGRYLNIPFLFLEEAMDLVSAL ENYQLQITGRTVNYFTFIALDNDSEIFKFKVESQQDYIELKLYSEDYHNFYDYSLLYANNVFYKLNQEQRRLLLVLDKQF AKKSQIKFSYADKDKLAQALQQLSTLGEIEAPDHFVVRPFDAKFTFDLLEDQTISLAMTFDYGSFSIDSFHDLETLEFSR DLRKEQKIFALMERLQFAKAFNSSLNIPENLSEHFFLKILPAFQKLGQIELSPTLRNMRMDEVPEIHIDSQGGLLDISFD IPQVEDGEFANVIAKLQENAEFYISESGKFYHFNEKFDRLKAALNELDDQFVIQGSSLHVNINRSFQISKIFENIGGASF SEKFKSLYQHLTHPEEFPYEKPEHIKASLRSYQETGVRWMSMLSHYNLGGILADDMGLGKTVQAITFILSNLKKDESVLI TAPASLTYNWASEFEKFTDEIDFAVIDGTKAERSKEIQEKHQIYITSYGSFLKDFEDYQDKKLNYLLLDEAQVVKNYSSK TNKSLSALNVEHTFALSGTPLENRIEEIWAIFQVVMPGFLPKREKFNKMEPSVISRLIQPFIMRRKKEDVLEELPEKMEI TVYNQLADDQKVIYLAQLELMQKQVLEMDSAALSRSRIEILAGITRLRQICNTPALFMDDYKGSSGKLERLRELLAQIKD SGHRPLIFSQFTKVFPHIEKLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRDAFLVSLKAGGVGLNLTSADVVILVDL WWNPAVEEQAIARAHRMGQKNTVEVIRLITKGTIEEKIMEIQERKKDLIANVLEGDTVDKVLSEAEIREILGV
Specific function: Unknown
COG id: COG0553
COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SWIM-type zinc finger [H]
Homologues:
Organism=Homo sapiens, GI164419749, Length=474, Percent_Identity=33.9662447257384, Blast_Score=247, Evalue=3e-65, Organism=Homo sapiens, GI21071058, Length=488, Percent_Identity=32.5819672131148, Blast_Score=245, Evalue=1e-64, Organism=Homo sapiens, GI27477070, Length=528, Percent_Identity=32.5757575757576, Blast_Score=241, Evalue=2e-63, Organism=Homo sapiens, GI21071044, Length=486, Percent_Identity=33.1275720164609, Blast_Score=239, Evalue=1e-62, Organism=Homo sapiens, GI148612870, Length=456, Percent_Identity=33.7719298245614, Blast_Score=235, Evalue=2e-61, Organism=Homo sapiens, GI48255898, Length=501, Percent_Identity=30.938123752495, Blast_Score=226, Evalue=9e-59, Organism=Homo sapiens, GI48255900, Length=501, Percent_Identity=30.938123752495, Blast_Score=226, Evalue=1e-58, Organism=Homo sapiens, GI192807316, Length=502, Percent_Identity=30.6772908366534, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI192807320, Length=502, Percent_Identity=30.6772908366534, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI192807318, Length=502, Percent_Identity=30.6772908366534, Blast_Score=224, Evalue=3e-58, Organism=Homo sapiens, GI192807314, Length=502, Percent_Identity=30.6772908366534, Blast_Score=224, Evalue=3e-58, Organism=Homo sapiens, GI192807323, Length=502, Percent_Identity=30.6772908366534, Blast_Score=224, Evalue=3e-58, Organism=Homo sapiens, GI192807312, Length=502, Percent_Identity=30.6772908366534, Blast_Score=224, Evalue=4e-58, Organism=Homo sapiens, GI21071056, Length=502, Percent_Identity=30.6772908366534, Blast_Score=224, Evalue=4e-58, Organism=Homo sapiens, GI21914927, Length=535, Percent_Identity=28.785046728972, Blast_Score=219, Evalue=1e-56, Organism=Homo sapiens, GI24308089, Length=478, Percent_Identity=31.5899581589958, Blast_Score=213, Evalue=9e-55, Organism=Homo sapiens, GI4557565, Length=487, Percent_Identity=30.5954825462012, Blast_Score=212, Evalue=2e-54, Organism=Homo sapiens, GI52630322, Length=510, Percent_Identity=31.1764705882353, Blast_Score=208, Evalue=2e-53, Organism=Homo sapiens, GI158420731, Length=510, Percent_Identity=31.1764705882353, Blast_Score=207, Evalue=3e-53, Organism=Homo sapiens, GI52630326, Length=510, Percent_Identity=31.1764705882353, Blast_Score=207, Evalue=4e-53, Organism=Homo sapiens, GI118421089, Length=464, Percent_Identity=32.9741379310345, Blast_Score=202, Evalue=2e-51, Organism=Homo sapiens, GI6912622, Length=505, Percent_Identity=30.0990099009901, Blast_Score=200, Evalue=5e-51, Organism=Homo sapiens, GI51599156, Length=517, Percent_Identity=31.5280464216634, Blast_Score=199, Evalue=1e-50, Organism=Homo sapiens, GI54112403, Length=503, Percent_Identity=30.2186878727634, Blast_Score=195, Evalue=2e-49, Organism=Homo sapiens, GI114326455, Length=480, Percent_Identity=30, Blast_Score=194, Evalue=3e-49, Organism=Homo sapiens, GI282165704, Length=480, Percent_Identity=30.4166666666667, Blast_Score=193, Evalue=8e-49, Organism=Homo sapiens, GI95147342, Length=481, Percent_Identity=30.5613305613306, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI58331268, Length=541, Percent_Identity=28.2809611829945, Blast_Score=189, Evalue=2e-47, Organism=Homo sapiens, GI29244924, Length=502, Percent_Identity=29.4820717131474, Blast_Score=187, Evalue=4e-47, Organism=Homo sapiens, GI68299795, Length=468, Percent_Identity=31.1965811965812, Blast_Score=184, Evalue=3e-46, Organism=Homo sapiens, GI58219008, Length=546, Percent_Identity=27.8388278388278, Blast_Score=175, Evalue=2e-43, Organism=Homo sapiens, GI216548193, Length=519, Percent_Identity=28.9017341040462, Blast_Score=171, Evalue=4e-42, Organism=Homo sapiens, GI216548186, Length=519, Percent_Identity=28.9017341040462, Blast_Score=171, Evalue=4e-42, Organism=Homo sapiens, GI40807471, Length=606, Percent_Identity=25.4125412541254, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI38708321, Length=343, Percent_Identity=31.1953352769679, Blast_Score=155, Evalue=2e-37, Organism=Homo sapiens, GI146219843, Length=303, Percent_Identity=30.3630363036304, Blast_Score=150, Evalue=5e-36, Organism=Homo sapiens, GI190358536, Length=326, Percent_Identity=28.2208588957055, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI190358532, Length=326, Percent_Identity=28.2208588957055, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI190358534, Length=326, Percent_Identity=28.2208588957055, Blast_Score=133, Evalue=7e-31, Organism=Homo sapiens, GI187761314, Length=427, Percent_Identity=27.6346604215457, Blast_Score=126, Evalue=9e-29, Organism=Homo sapiens, GI21071060, Length=427, Percent_Identity=27.6346604215457, Blast_Score=126, Evalue=9e-29, Organism=Homo sapiens, GI56549696, Length=315, Percent_Identity=29.2063492063492, Blast_Score=124, Evalue=6e-28, Organism=Homo sapiens, GI62860046, Length=464, Percent_Identity=23.4913793103448, Blast_Score=116, Evalue=9e-26, Organism=Homo sapiens, GI21071052, Length=154, Percent_Identity=39.6103896103896, Blast_Score=106, Evalue=1e-22, Organism=Homo sapiens, GI21071054, Length=154, Percent_Identity=39.6103896103896, Blast_Score=106, Evalue=1e-22, Organism=Homo sapiens, GI20336205, Length=191, Percent_Identity=31.413612565445, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI20336209, Length=191, Percent_Identity=31.413612565445, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI168823443, Length=154, Percent_Identity=30.5194805194805, Blast_Score=76, Evalue=2e-13, Organism=Caenorhabditis elegans, GI25144179, Length=453, Percent_Identity=34.878587196468, Blast_Score=251, Evalue=1e-66, Organism=Caenorhabditis elegans, GI17539642, Length=491, Percent_Identity=33.4012219959267, Blast_Score=241, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17551114, Length=491, Percent_Identity=33.1975560081466, Blast_Score=233, Evalue=3e-61, Organism=Caenorhabditis elegans, GI193204424, Length=519, Percent_Identity=31.2138728323699, Blast_Score=224, Evalue=2e-58, Organism=Caenorhabditis elegans, GI32563629, Length=456, Percent_Identity=34.2105263157895, Blast_Score=221, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17569817, Length=511, Percent_Identity=31.1154598825832, Blast_Score=217, Evalue=3e-56, Organism=Caenorhabditis elegans, GI17562600, Length=511, Percent_Identity=31.3111545988258, Blast_Score=210, Evalue=2e-54, Organism=Caenorhabditis elegans, GI71988744, Length=528, Percent_Identity=28.9772727272727, Blast_Score=205, Evalue=1e-52, Organism=Caenorhabditis elegans, GI193203140, Length=510, Percent_Identity=30.9803921568627, Blast_Score=192, Evalue=1e-48, Organism=Caenorhabditis elegans, GI71991518, Length=503, Percent_Identity=27.4353876739563, Blast_Score=189, Evalue=7e-48, Organism=Caenorhabditis elegans, GI71995707, Length=485, Percent_Identity=29.8969072164948, Blast_Score=181, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17508659, Length=521, Percent_Identity=27.831094049904, Blast_Score=176, Evalue=6e-44, Organism=Caenorhabditis elegans, GI115534248, Length=300, Percent_Identity=31.6666666666667, Blast_Score=154, Evalue=2e-37, Organism=Caenorhabditis elegans, GI193203249, Length=173, Percent_Identity=42.1965317919075, Blast_Score=130, Evalue=5e-30, Organism=Caenorhabditis elegans, GI17540630, Length=185, Percent_Identity=38.9189189189189, Blast_Score=120, Evalue=3e-27, Organism=Caenorhabditis elegans, GI25148960, Length=433, Percent_Identity=26.0969976905312, Blast_Score=119, Evalue=7e-27, Organism=Caenorhabditis elegans, GI25148958, Length=433, Percent_Identity=26.0969976905312, Blast_Score=119, Evalue=8e-27, Organism=Caenorhabditis elegans, GI17552194, Length=433, Percent_Identity=26.0969976905312, Blast_Score=119, Evalue=9e-27, Organism=Caenorhabditis elegans, GI17561718, Length=127, Percent_Identity=48.0314960629921, Blast_Score=113, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17538806, Length=174, Percent_Identity=29.8850574712644, Blast_Score=85, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71980419, Length=284, Percent_Identity=25.7042253521127, Blast_Score=77, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6325175, Length=539, Percent_Identity=33.7662337662338, Blast_Score=268, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6322065, Length=485, Percent_Identity=33.8144329896907, Blast_Score=236, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6324879, Length=482, Percent_Identity=32.5726141078838, Blast_Score=234, Evalue=6e-62, Organism=Saccharomyces cerevisiae, GI6319722, Length=496, Percent_Identity=32.258064516129, Blast_Score=234, Evalue=7e-62, Organism=Saccharomyces cerevisiae, GI6324864, Length=495, Percent_Identity=31.1111111111111, Blast_Score=227, Evalue=9e-60, Organism=Saccharomyces cerevisiae, GI6321012, Length=479, Percent_Identity=32.1503131524008, Blast_Score=219, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6322495, Length=522, Percent_Identity=29.3103448275862, Blast_Score=209, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6321153, Length=542, Percent_Identity=28.5977859778598, Blast_Score=203, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6319547, Length=495, Percent_Identity=29.6969696969697, Blast_Score=186, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6321275, Length=499, Percent_Identity=27.8557114228457, Blast_Score=171, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6321289, Length=338, Percent_Identity=28.1065088757396, Blast_Score=148, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6320541, Length=316, Percent_Identity=27.5316455696203, Blast_Score=140, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6319300, Length=273, Percent_Identity=30.4029304029304, Blast_Score=126, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6323060, Length=146, Percent_Identity=41.0958904109589, Blast_Score=108, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6319590, Length=156, Percent_Identity=37.8205128205128, Blast_Score=106, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6324765, Length=163, Percent_Identity=33.7423312883436, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI281361889, Length=525, Percent_Identity=33.1428571428571, Blast_Score=248, Evalue=1e-65, Organism=Drosophila melanogaster, GI24653134, Length=468, Percent_Identity=32.4786324786325, Blast_Score=234, Evalue=3e-61, Organism=Drosophila melanogaster, GI24653132, Length=468, Percent_Identity=32.4786324786325, Blast_Score=234, Evalue=3e-61, Organism=Drosophila melanogaster, GI17737463, Length=468, Percent_Identity=32.4786324786325, Blast_Score=234, Evalue=3e-61, Organism=Drosophila melanogaster, GI24664914, Length=500, Percent_Identity=30.2, Blast_Score=229, Evalue=9e-60, Organism=Drosophila melanogaster, GI17985967, Length=500, Percent_Identity=30.2, Blast_Score=229, Evalue=9e-60, Organism=Drosophila melanogaster, GI24664907, Length=500, Percent_Identity=30.2, Blast_Score=228, Evalue=1e-59, Organism=Drosophila melanogaster, GI28574896, Length=500, Percent_Identity=30.2, Blast_Score=228, Evalue=1e-59, Organism=Drosophila melanogaster, GI85724914, Length=548, Percent_Identity=29.014598540146, Blast_Score=209, Evalue=8e-54, Organism=Drosophila melanogaster, GI17137266, Length=462, Percent_Identity=33.3333333333333, Blast_Score=202, Evalue=1e-51, Organism=Drosophila melanogaster, GI281366478, Length=505, Percent_Identity=30.6930693069307, Blast_Score=201, Evalue=2e-51, Organism=Drosophila melanogaster, GI24667055, Length=505, Percent_Identity=30.6930693069307, Blast_Score=201, Evalue=2e-51, Organism=Drosophila melanogaster, GI62472261, Length=505, Percent_Identity=30.6930693069307, Blast_Score=201, Evalue=3e-51, Organism=Drosophila melanogaster, GI24583161, Length=548, Percent_Identity=29.1970802919708, Blast_Score=199, Evalue=1e-50, Organism=Drosophila melanogaster, GI24666729, Length=475, Percent_Identity=30.7368421052632, Blast_Score=198, Evalue=1e-50, Organism=Drosophila melanogaster, GI17986031, Length=511, Percent_Identity=30.9197651663405, Blast_Score=189, Evalue=1e-47, Organism=Drosophila melanogaster, GI221330583, Length=513, Percent_Identity=30.7992202729045, Blast_Score=188, Evalue=2e-47, Organism=Drosophila melanogaster, GI17136368, Length=500, Percent_Identity=28.2, Blast_Score=175, Evalue=1e-43, Organism=Drosophila melanogaster, GI24648168, Length=327, Percent_Identity=33.0275229357798, Blast_Score=154, Evalue=4e-37, Organism=Drosophila melanogaster, GI24656962, Length=300, Percent_Identity=29.3333333333333, Blast_Score=140, Evalue=4e-33, Organism=Drosophila melanogaster, GI24656966, Length=300, Percent_Identity=29.3333333333333, Blast_Score=140, Evalue=4e-33, Organism=Drosophila melanogaster, GI28573600, Length=305, Percent_Identity=29.5081967213115, Blast_Score=140, Evalue=4e-33, Organism=Drosophila melanogaster, GI85724912, Length=319, Percent_Identity=28.2131661442006, Blast_Score=126, Evalue=8e-29, Organism=Drosophila melanogaster, GI24644932, Length=158, Percent_Identity=34.1772151898734, Blast_Score=100, Evalue=5e-21, Organism=Drosophila melanogaster, GI281361297, Length=159, Percent_Identity=32.0754716981132, Blast_Score=83, Evalue=1e-15, Organism=Drosophila melanogaster, GI21356675, Length=124, Percent_Identity=32.258064516129, Blast_Score=80, Evalue=6e-15, Organism=Drosophila melanogaster, GI24650076, Length=124, Percent_Identity=32.258064516129, Blast_Score=80, Evalue=6e-15, Organism=Drosophila melanogaster, GI62484263, Length=123, Percent_Identity=34.1463414634146, Blast_Score=77, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000330 - InterPro: IPR007527 [H]
Pfam domain/function: PF00271 Helicase_C; PF00176 SNF2_N; PF04434 SWIM [H]
EC number: NA
Molecular weight: Translated: 119264; Mature: 119133
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS50966 ZF_SWIM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRMMPARVRSEGIALYAKGFLNDPIETDFKLTAEIDGEEVSYDLDGAQDSCTCAVFQQN CCCCCCCHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCEEEEEHHC HRYCKHIAAIEEYLKNQDKGSQETKDKEIKGAERALFGENVAFLDAVNGETQLNFNTDQY HHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHCCCEEEEEECCCCEEEEECCCEE SIEVQIEDNSQLYDYFSMDYFLYFDLKLRSKNLGRSYVIKDIPYFLRALKNYSQYSLGSL EEEEEECCCCCEEHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCE HYIDLFFDNFDEASQEFLTFLLKIDSKSDEALTKSLYIKNGRYLNIPFLFLEEAMDLVSA EEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHEEECCCEEECHHHHHHHHHHHHHH LENYQLQITGRTVNYFTFIALDNDSEIFKFKVESQQDYIELKLYSEDYHNFYDYSLLYAN HCCCEEEEEEEEEEEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCHHCEEEEEEC NVFYKLNQEQRRLLLVLDKQFAKKSQIKFSYADKDKLAQALQQLSTLGEIEAPDHFVVRP CEEEEECHHHCCEEEEECHHHHHHHCEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEC FDAKFTFDLLEDQTISLAMTFDYGSFSIDSFHDLETLEFSRDLRKEQKIFALMERLQFAK CCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AFNSSLNIPENLSEHFFLKILPAFQKLGQIELSPTLRNMRMDEVPEIHIDSQGGLLDISF HHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECHHHHCCCCCCCCEEEECCCCCEEEEEE DIPQVEDGEFANVIAKLQENAEFYISESGKFYHFNEKFDRLKAALNELDDQFVIQGSSLH CCCCCCCCHHHHHHHHHHCCCEEEEECCCCEEECHHHHHHHHHHHHHCCCCEEEECCEEE VNINRSFQISKIFENIGGASFSEKFKSLYQHLTHPEEFPYEKPEHIKASLRSYQETGVRW EEECCCEEHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH MSMLSHYNLGGILADDMGLGKTVQAITFILSNLKKDESVLITAPASLTYNWASEFEKFTD HHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHHHH EIDFAVIDGTKAERSKEIQEKHQIYITSYGSFLKDFEDYQDKKLNYLLLDEAQVVKNYSS HCCEEEECCCHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHH KTNKSLSALNVEHTFALSGTPLENRIEEIWAIFQVVMPGFLPKREKFNKMEPSVISRLIQ HCCCCHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHH PFIMRRKKEDVLEELPEKMEITVYNQLADDQKVIYLAQLELMQKQVLEMDSAALSRSRIE HHHHHHHHHHHHHHCCHHEEEEEEHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH ILAGITRLRQICNTPALFMDDYKGSSGKLERLRELLAQIKDSGHRPLIFSQFTKVFPHIE HHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH KLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRDAFLVSLKAGGVGLNLTSADVVILVD HHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCEEEEEE LWWNPAVEEQAIARAHRMGQKNTVEVIRLITKGTIEEKIMEIQERKKDLIANVLEGDTVD ECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHH KVLSEAEIREILGV HHHHHHHHHHHHCC >Mature Secondary Structure SRMMPARVRSEGIALYAKGFLNDPIETDFKLTAEIDGEEVSYDLDGAQDSCTCAVFQQN CCCCCCHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCEEEEEHHC HRYCKHIAAIEEYLKNQDKGSQETKDKEIKGAERALFGENVAFLDAVNGETQLNFNTDQY HHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHCCCEEEEEECCCCEEEEECCCEE SIEVQIEDNSQLYDYFSMDYFLYFDLKLRSKNLGRSYVIKDIPYFLRALKNYSQYSLGSL EEEEEECCCCCEEHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCE HYIDLFFDNFDEASQEFLTFLLKIDSKSDEALTKSLYIKNGRYLNIPFLFLEEAMDLVSA EEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHEEECCCEEECHHHHHHHHHHHHHH LENYQLQITGRTVNYFTFIALDNDSEIFKFKVESQQDYIELKLYSEDYHNFYDYSLLYAN HCCCEEEEEEEEEEEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCHHCEEEEEEC NVFYKLNQEQRRLLLVLDKQFAKKSQIKFSYADKDKLAQALQQLSTLGEIEAPDHFVVRP CEEEEECHHHCCEEEEECHHHHHHHCEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEC FDAKFTFDLLEDQTISLAMTFDYGSFSIDSFHDLETLEFSRDLRKEQKIFALMERLQFAK CCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AFNSSLNIPENLSEHFFLKILPAFQKLGQIELSPTLRNMRMDEVPEIHIDSQGGLLDISF HHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECHHHHCCCCCCCCEEEECCCCCEEEEEE DIPQVEDGEFANVIAKLQENAEFYISESGKFYHFNEKFDRLKAALNELDDQFVIQGSSLH CCCCCCCCHHHHHHHHHHCCCEEEEECCCCEEECHHHHHHHHHHHHHCCCCEEEECCEEE VNINRSFQISKIFENIGGASFSEKFKSLYQHLTHPEEFPYEKPEHIKASLRSYQETGVRW EEECCCEEHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH MSMLSHYNLGGILADDMGLGKTVQAITFILSNLKKDESVLITAPASLTYNWASEFEKFTD HHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHHHH EIDFAVIDGTKAERSKEIQEKHQIYITSYGSFLKDFEDYQDKKLNYLLLDEAQVVKNYSS HCCEEEECCCHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHH KTNKSLSALNVEHTFALSGTPLENRIEEIWAIFQVVMPGFLPKREKFNKMEPSVISRLIQ HCCCCHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHH PFIMRRKKEDVLEELPEKMEITVYNQLADDQKVIYLAQLELMQKQVLEMDSAALSRSRIE HHHHHHHHHHHHHHCCHHEEEEEEHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH ILAGITRLRQICNTPALFMDDYKGSSGKLERLRELLAQIKDSGHRPLIFSQFTKVFPHIE HHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH KLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRDAFLVSLKAGGVGLNLTSADVVILVD HHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCEEEEEE LWWNPAVEEQAIARAHRMGQKNTVEVIRLITKGTIEEKIMEIQERKKDLIANVLEGDTVD ECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHH KVLSEAEIREILGV HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7569993; 8253680 [H]