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The map label for this gene is rmeD

Identifier: 15673959

GI number: 15673959

Start: 2052690

End: 2053067

Strand: Direct

Name: rmeD

Synonym: L35965

Alternate gene names: 15673959

Gene position: 2052690-2053067 (Clockwise)

Preceding gene: 15673957

Following gene: 15673968

Centisome position: 86.77

GC content: 31.22

Gene sequence:

>378_bases
ATGACTAAAACTTATAAAATTTCAGAAATAGCTTTACTGACAGAACTTCCAATCGCTACTCTTCGTTATTATGAAGAACT
TGATTTATTAAAACCTGCTCGAAACTCTAGTAATTATCGAGAGTTTACAGAAGCTGACCTTGAATGGATTTTCTTTATCA
AAAGAGCTAAAGCAACAGGAATGTCTCTTGCAAAAATCCAAGATTATTCTCGCTTAAGAGAGCAAGGTGATTCAACAATT
ATTCAACGTATTTCACTTTTAGTTGAACAAGAGCGAATTTTACGCCAACAAATTACTGACTTAGAAGGTCACTTAGATTT
TATTTTACAAAAAAAACATCATTACTATGAAACTCTTCAAAAAAACTCGGAATCTTAA

Upstream 100 bases:

>100_bases
AAACCAATTTCTTTTTTATTCATTTTATTTACCAGCTTTCTATGATAAAATCATTATAAACCTTCAAGTTAACTTGAGGG
CAAGCAAAAAAGAGAAAAAA

Downstream 100 bases:

>100_bases
TTCCGAGTTTTTTTATGGTGTTTCATATAAAAAATTTTTAACATATTTTGCTACAGTTGGATTTGTCGGAGCTTTTGAAT
GCCTAAGTTTCGTTGGATAC

Product: transcription regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcription Regulator; MerR-Family Transcriptional Regulator; MerR Family Regulatory Protein; SoxR Protein; Transcriptional Regulator MerR Family Protein; Regulatory Protein; Aldo/Keto Reductase; Hth Transcriptional Regulator Merr Family; Transcriptional Activator Of AdhA-YraA And YraC; Mercuric Resisitant Regulatory Protein; MerR Family Transcription Regulator Protein; Regulatory Protein MerR; Merr Family Transcriptional Regulator; Transcription Regulator MerR

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MTKTYKISEIALLTELPIATLRYYEELDLLKPARNSSNYREFTEADLEWIFFIKRAKATGMSLAKIQDYSRLREQGDSTI
IQRISLLVEQERILRQQITDLEGHLDFILQKKHHYYETLQKNSES

Sequences:

>Translated_125_residues
MTKTYKISEIALLTELPIATLRYYEELDLLKPARNSSNYREFTEADLEWIFFIKRAKATGMSLAKIQDYSRLREQGDSTI
IQRISLLVEQERILRQQITDLEGHLDFILQKKHHYYETLQKNSES
>Mature_124_residues
TKTYKISEIALLTELPIATLRYYEELDLLKPARNSSNYREFTEADLEWIFFIKRAKATGMSLAKIQDYSRLREQGDSTII
QRISLLVEQERILRQQITDLEGHLDFILQKKHHYYETLQKNSES

Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14842; Mature: 14711

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTYKISEIALLTELPIATLRYYEELDLLKPARNSSNYREFTEADLEWIFFIKRAKATG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
MSLAKIQDYSRLREQGDSTIIQRISLLVEQERILRQQITDLEGHLDFILQKKHHYYETLQ
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNSES
CCCCC
>Mature Secondary Structure 
TKTYKISEIALLTELPIATLRYYEELDLLKPARNSSNYREFTEADLEWIFFIKRAKATG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
MSLAKIQDYSRLREQGDSTIIQRISLLVEQERILRQQITDLEGHLDFILQKKHHYYETLQ
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNSES
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA