| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is yudF
Identifier: 15673940
GI number: 15673940
Start: 2033751
End: 2034074
Strand: Reverse
Name: yudF
Synonym: L17182
Alternate gene names: NA
Gene position: 2034074-2033751 (Counterclockwise)
Preceding gene: 15673944
Following gene: 15673939
Centisome position: 85.99
GC content: 33.95
Gene sequence:
>324_bases ATGGAATTTGAAGATTATTTTAAAAATGATGAGTTAATGAACACTGTCAGAGAAACTGTAAAATTGGTCTTTCCTGAAGC ACAAGAACGTATTTCCTACGGAATGCCTGCATGGTTTAAGGATAAGAATGTCCTTATTTATGCAAGTCCTCAAAAAAAGC ACTTAGGAATTTATCCCAAACCAAACTTCATTGAAAATAATAGTGCGTCTCTTAAAGAACAATACGAATGCAGTAAAGTG ACCATAAAAGTCCCTTATGATGTTGAAACCAATGAACTCAAACGCTTAGTTAGTGAGATTGTAAAATGGAACTTGGGCCA TTAA
Upstream 100 bases:
>100_bases AAGGATTTTGATAAACTAATAGCAGTAAATAAATTTTTTTTTGAACATATTATTACTAAAAACAACAAAAAAATGATAAT GAAGATGAGAGAGGCCTGCT
Downstream 100 bases:
>100_bases ATTTAACTGGTGTTTTGATAATAAACTATAAAAATTATTTGTATTTGTAAATTTATGTATCCTGAAACCAATTATTAAAA GAAAGAATGTGAATTATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MEFEDYFKNDELMNTVRETVKLVFPEAQERISYGMPAWFKDKNVLIYASPQKKHLGIYPKPNFIENNSASLKEQYECSKV TIKVPYDVETNELKRLVSEIVKWNLGH
Sequences:
>Translated_107_residues MEFEDYFKNDELMNTVRETVKLVFPEAQERISYGMPAWFKDKNVLIYASPQKKHLGIYPKPNFIENNSASLKEQYECSKV TIKVPYDVETNELKRLVSEIVKWNLGH >Mature_107_residues MEFEDYFKNDELMNTVRETVKLVFPEAQERISYGMPAWFKDKNVLIYASPQKKHLGIYPKPNFIENNSASLKEQYECSKV TIKVPYDVETNELKRLVSEIVKWNLGH
Specific function: Unknown
COG id: COG5646
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12632; Mature: 12632
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFEDYFKNDELMNTVRETVKLVFPEAQERISYGMPAWFKDKNVLIYASPQKKHLGIYPK CCCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCEECCCCEEEEECCCCCCCCCCCC PNFIENNSASLKEQYECSKVTIKVPYDVETNELKRLVSEIVKWNLGH CCCCCCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEFEDYFKNDELMNTVRETVKLVFPEAQERISYGMPAWFKDKNVLIYASPQKKHLGIYPK CCCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCEECCCCEEEEECCCCCCCCCCCC PNFIENNSASLKEQYECSKVTIKVPYDVETNELKRLVSEIVKWNLGH CCCCCCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA