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The map label for this gene is yudD

Identifier: 15673938

GI number: 15673938

Start: 2032821

End: 2033324

Strand: Reverse

Name: yudD

Synonym: L16252

Alternate gene names: NA

Gene position: 2033324-2032821 (Counterclockwise)

Preceding gene: 15673939

Following gene: 15673937

Centisome position: 85.95

GC content: 34.72

Gene sequence:

>504_bases
ATGGATATGAGAAGAGCTAAAAGACAGGTCACAAACATTGAGCTAATTAAAGAACTGGTTGAAGAAGTACAAGTCGTTCG
TCTGGCCATAAATGGAGAAATTTACCCCTATGTAGTACCAGTAAATTTCGGCTATTCTTGGGATAATAATGATCAACTAA
CACTATATGTTCATGGAGCAAAAGAAGGAAAGAAAGTATCAATGCTAGAAAAAAATCCTTTAGTTGCTGTCGAAATGGAT
AGTCATCATAAGCTAATCGAAGGAAATAAAAATGCTTCAACTTATTCTTACGCCTATCAAAGTTTGATTGGTTTTGGAAA
AGCAGAAATGATAGAAAATTTGGACGAAAAGAGGGTGGCATTGGAGCTTTTAATGGAGCATGCAGCAAAAGGAAAAGAAT
ACGACCCCATGCCAGAAAAAATGTTAGAGCGAGTTGGAGTAATAAAAATTGAATTGGACTCATATACTGTAAAACAAAAT
ATCCATCCTGAGAAAAAAAATTAG

Upstream 100 bases:

>100_bases
CGTTGGATAAGTAAACCCTGAGAATGGTATTTTAAAATAATCATATGTAAAAATTTAATATAAATTAATTGAACAAATAC
AGAAGTAAAGGATAATAACA

Downstream 100 bases:

>100_bases
AAATTTTTGGGACTTATATTGTTAAGCTAAATAAAAATGTTCTTTAAAAGAGAATGATTTTATATAAATTATGAAAATTT
GGAGTAGAAAATGATTAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Nitroimidazole Resistance Protein; Pyridoxamine 5-Phosphate Oxidase Family Protein; Antibiotic Resistance Protein; Pyridoxamine 5\-Phosphate-Related Protein; 5-Nitroimadazole Antibiotic Resistance Protein; 5-Nitroimidazole Antibiotic Resistance

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MDMRRAKRQVTNIELIKELVEEVQVVRLAINGEIYPYVVPVNFGYSWDNNDQLTLYVHGAKEGKKVSMLEKNPLVAVEMD
SHHKLIEGNKNASTYSYAYQSLIGFGKAEMIENLDEKRVALELLMEHAAKGKEYDPMPEKMLERVGVIKIELDSYTVKQN
IHPEKKN

Sequences:

>Translated_167_residues
MDMRRAKRQVTNIELIKELVEEVQVVRLAINGEIYPYVVPVNFGYSWDNNDQLTLYVHGAKEGKKVSMLEKNPLVAVEMD
SHHKLIEGNKNASTYSYAYQSLIGFGKAEMIENLDEKRVALELLMEHAAKGKEYDPMPEKMLERVGVIKIELDSYTVKQN
IHPEKKN
>Mature_167_residues
MDMRRAKRQVTNIELIKELVEEVQVVRLAINGEIYPYVVPVNFGYSWDNNDQLTLYVHGAKEGKKVSMLEKNPLVAVEMD
SHHKLIEGNKNASTYSYAYQSLIGFGKAEMIENLDEKRVALELLMEHAAKGKEYDPMPEKMLERVGVIKIELDSYTVKQN
IHPEKKN

Specific function: Unknown

COG id: COG3467

COG function: function code R; Predicted flavin-nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19209; Mature: 19209

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMRRAKRQVTNIELIKELVEEVQVVRLAINGEIYPYVVPVNFGYSWDNNDQLTLYVHGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEEECCCCCCCCCEEEEEEECC
KEGKKVSMLEKNPLVAVEMDSHHKLIEGNKNASTYSYAYQSLIGFGKAEMIENLDEKRVA
CCCCEEEEECCCCEEEEEECCCCCEECCCCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHH
LELLMEHAAKGKEYDPMPEKMLERVGVIKIELDSYTVKQNIHPEKKN
HHHHHHHHHCCCCCCCCHHHHHHHCCEEEEEECCEEEECCCCCCCCC
>Mature Secondary Structure
MDMRRAKRQVTNIELIKELVEEVQVVRLAINGEIYPYVVPVNFGYSWDNNDQLTLYVHGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEEECCCCCCCCCEEEEEEECC
KEGKKVSMLEKNPLVAVEMDSHHKLIEGNKNASTYSYAYQSLIGFGKAEMIENLDEKRVA
CCCCEEEEECCCCEEEEEECCCCCEECCCCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHH
LELLMEHAAKGKEYDPMPEKMLERVGVIKIELDSYTVKQNIHPEKKN
HHHHHHHHHCCCCCCCCHHHHHHHCCEEEEEECCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA