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The map label for this gene is pdc

Identifier: 15673912

GI number: 15673912

Start: 2010581

End: 2011114

Strand: Direct

Name: pdc

Synonym: L193734

Alternate gene names: 15673912

Gene position: 2010581-2011114 (Clockwise)

Preceding gene: 15673885

Following gene: 15673913

Centisome position: 84.99

GC content: 35.39

Gene sequence:

>534_bases
ATGAAAACATTTAAAAGCTTAGAAGATTTTGTCGGAACACACTTTATCTATACCTATGATAATGGTTGGGAATATGAACT
TTACGTCAAAAACGACCATACCATTGATTACCGTATCCATGGCGGAATGGTCGCTGGCCGCTGGGTCAAAGACCAAGAAG
TTTCATTAGTGATGTTAACCGAAGGGATTTATAAAATTACATGGACAGAACCTACTGGTACTGATGTTGCCTTAGATTTT
CTTCCAAATGAAGGAAAATTACATGGCATGATTTTCTTCCCGAAATGGGTAGAAGAACACCCAGAAATCACTGTCTGCTT
CCAAAATGATTTTATTGATTTAATGCATGAATCTCGCGAAAAATATGAAACTTATCCTAAATATTTAGTTCCAGAATTTG
CAAAAATCACTTATGCTGCTGAAGCAGGCAAAGATAATGACGATGTCGTCGCACAAGCTCCTTACAAAGAAATGACAAAT
GATATTCGTAACGGAAAATACTTTGACCAAAATTATAAAATGATTAAGCATTAA

Upstream 100 bases:

>100_bases
GAAAGTGTATATTTTTATCTTGACAAAACAAAAAACGTATTTTATAATAAATATATATTTAAAACATGTTTATAAAATAT
GTTTAGAAAGAAGAAATTTA

Downstream 100 bases:

>100_bases
TTTTCAAGTCAAAAATAATAAAGAAGAGACAAATAATATTTAATTTGTCTCTTCTTTATTTGAGAAATCAATAGAATACC
AGCTTATCAACATTAAATAA

Product: phenolic acid decarboxylase

Products: NA

Alternate protein names: PAD [H]

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MKTFKSLEDFVGTHFIYTYDNGWEYELYVKNDHTIDYRIHGGMVAGRWVKDQEVSLVMLTEGIYKITWTEPTGTDVALDF
LPNEGKLHGMIFFPKWVEEHPEITVCFQNDFIDLMHESREKYETYPKYLVPEFAKITYAAEAGKDNDDVVAQAPYKEMTN
DIRNGKYFDQNYKMIKH

Sequences:

>Translated_177_residues
MKTFKSLEDFVGTHFIYTYDNGWEYELYVKNDHTIDYRIHGGMVAGRWVKDQEVSLVMLTEGIYKITWTEPTGTDVALDF
LPNEGKLHGMIFFPKWVEEHPEITVCFQNDFIDLMHESREKYETYPKYLVPEFAKITYAAEAGKDNDDVVAQAPYKEMTN
DIRNGKYFDQNYKMIKH
>Mature_177_residues
MKTFKSLEDFVGTHFIYTYDNGWEYELYVKNDHTIDYRIHGGMVAGRWVKDQEVSLVMLTEGIYKITWTEPTGTDVALDF
LPNEGKLHGMIFFPKWVEEHPEITVCFQNDFIDLMHESREKYETYPKYLVPEFAKITYAAEAGKDNDDVVAQAPYKEMTN
DIRNGKYFDQNYKMIKH

Specific function: Involved in the decarboxylation and detoxification of phenolic derivatives. It is able to catalyze the decarboxylation of ferulic, p-coumaric and caffeic acids [H]

COG id: COG3479

COG function: function code Q; Phenolic acid decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the padC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR008729
- ProDom:   PD022010 [H]

Pfam domain/function: PF05870 PA_decarbox [H]

EC number: NA

Molecular weight: Translated: 20892; Mature: 20892

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFKSLEDFVGTHFIYTYDNGWEYELYVKNDHTIDYRIHGGMVAGRWVKDQEVSLVMLT
CCCHHHHHHHHCCEEEEEECCCEEEEEEEECCCEEEEEEECCEEECCEECCCCEEEEEEE
EGIYKITWTEPTGTDVALDFLPNEGKLHGMIFFPKWVEEHPEITVCFQNDFIDLMHESRE
CCEEEEEECCCCCCEEEEEEECCCCCEEEEEEECHHHCCCCCEEEEECCCHHHHHHHHHH
KYETYPKYLVPEFAKITYAAEAGKDNDDVVAQAPYKEMTNDIRNGKYFDQNYKMIKH
HHHCCCCCCCCCHHHEEEEECCCCCCCCEEEECCHHHHHHHHCCCEEECCCEEEECC
>Mature Secondary Structure
MKTFKSLEDFVGTHFIYTYDNGWEYELYVKNDHTIDYRIHGGMVAGRWVKDQEVSLVMLT
CCCHHHHHHHHCCEEEEEECCCEEEEEEEECCCEEEEEEECCEEECCEECCCCEEEEEEE
EGIYKITWTEPTGTDVALDFLPNEGKLHGMIFFPKWVEEHPEITVCFQNDFIDLMHESRE
CCEEEEEECCCCCCEEEEEEECCCCCEEEEEEECHHHCCCCCEEEEECCCHHHHHHHHHH
KYETYPKYLVPEFAKITYAAEAGKDNDDVVAQAPYKEMTNDIRNGKYFDQNYKMIKH
HHHCCCCCCCCCHHHEEEEECCCCCCCCEEEECCHHHHHHHHCCCEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9546183; 9384377 [H]