| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is ythB
Identifier: 15673887
GI number: 15673887
Start: 1974300
End: 1974503
Strand: Reverse
Name: ythB
Synonym: L157730
Alternate gene names: NA
Gene position: 1974503-1974300 (Counterclockwise)
Preceding gene: 15673888
Following gene: 15673886
Centisome position: 83.47
GC content: 42.65
Gene sequence:
>204_bases ATGGCTAAGAAAACTCTGAAAAGATCAAGTAGCAATCGAGTCATCGCAGGAACCGTCGGGGGACTTGGTGAATACTTTGG CTTGAGCCGTACAGTAATTAATGTAATTCGGGTTCTGATTGTGCTTGGTACTTTCGGAAGTTGGGGAACATTACTCATTG TTTATGTGATTGCGAGTCTATTGATGACACCGTCACAAGGTTAA
Upstream 100 bases:
>100_bases AAAGATACTGAAACTACTGACAAAGAAGAAACTGAATAAAATTTTACTGACAGAAATTTTATAAGAGTTCTGTCAGTAAA TTTGAAAAGAAAGGTGAGAA
Downstream 100 bases:
>100_bases TTCAACGATTATGAAGAAAGGATAAATTATGTCTCAAAGACAATTAACAAAATCAGTGACAAATCGTAGAGTCAGTGGTG TCATTGCAGGGATTGCAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 67; Mature: 66
Protein sequence:
>67_residues MAKKTLKRSSSNRVIAGTVGGLGEYFGLSRTVINVIRVLIVLGTFGSWGTLLIVYVIASLLMTPSQG
Sequences:
>Translated_67_residues MAKKTLKRSSSNRVIAGTVGGLGEYFGLSRTVINVIRVLIVLGTFGSWGTLLIVYVIASLLMTPSQG >Mature_66_residues AKKTLKRSSSNRVIAGTVGGLGEYFGLSRTVINVIRVLIVLGTFGSWGTLLIVYVIASLLMTPSQG
Specific function: Unknown
COG id: COG1983
COG function: function code KT; Putative stress-responsive transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7113; Mature: 6981
Theoretical pI: Translated: 11.61; Mature: 11.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKTLKRSSSNRVIAGTVGGLGEYFGLSRTVINVIRVLIVLGTFGSWGTLLIVYVIASL CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LMTPSQG HCCCCCC >Mature Secondary Structure AKKTLKRSSSNRVIAGTVGGLGEYFGLSRTVINVIRVLIVLGTFGSWGTLLIVYVIASL CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LMTPSQG HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA