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The map label for this gene is yrjD

Identifier: 15673717

GI number: 15673717

Start: 1793237

End: 1793920

Strand: Direct

Name: yrjD

Synonym: L176579

Alternate gene names: 15673717

Gene position: 1793237-1793920 (Clockwise)

Preceding gene: 15673716

Following gene: 15673721

Centisome position: 75.81

GC content: 37.43

Gene sequence:

>684_bases
ATGACAGGAACTATTGAAAATCGAAGTAAATTTTTAGAAACTTTATTTGAAAAACGTGGGGGTGTAGAACTTCCATTTGA
ACCTTATGTTCCAATTTCAGATTTGCCTGAGACACATTTGGCTCATTTAACTACTGAGGAATTATTGGATATTGCTAAGG
AGCAAGCCAGCCGAGTTTCTGCTAATTTAATTGAAACCTCTTCTTTTGAAATGAATGAAGTGATTCGCCAATTAATTGAA
AAATCTGGTGGCGGACAAGTCATGATTCCTTCAACAGATGAATTTGAAAAATTAGGAGTGAATGTTATTTCAGACCAATT
GGTGAAGTGGAAAATTGGTAAAGAAAATCGTGATGAAAATATTAATGCTGCCCAAAATTCTAATGTCGTCGTGGCTGTTC
CTAAATTTTTCCTCGCTGAATCAGCAACGATTGTAGTCGAATCAGAAGCTGGCCAAGGGCGTTCTTTACACTTCTTACCC
ACTCATTATATTTCTGTAATTCCACTAAGTCGTATGGTTCCTCGTTCTACCCAAGCTGCGGCTTGGTTTGATGAACATAA
GAAGCCTGGGTCAACCCTTCATTTTATTTCTGGCCCCTCAAATTCTGGTGATATTGAGATGCAACTTGTGGTTGGACTTC
ATGGTCCTTTGGAAATTAATTATGTGATTGTCAAAGATTTATGA

Upstream 100 bases:

>100_bases
TAGCTAAAGGTTGGACAGATGTCCGAGATTTGCCAATTGCTCCGCCACATAAAGAACAATTTCGTCAGTGGTATAAAAAA
CATAAGGCAGGTAAATAAAT

Downstream 100 bases:

>100_bases
AAGGAAAAAACTCTGCTGACAGCAGAGTTTTTTATTATTATTTTACTGACAGATGTGTTGTCAGTAATTTTTGCTTAATC
GCGATTTCCACCTGCGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MTGTIENRSKFLETLFEKRGGVELPFEPYVPISDLPETHLAHLTTEELLDIAKEQASRVSANLIETSSFEMNEVIRQLIE
KSGGGQVMIPSTDEFEKLGVNVISDQLVKWKIGKENRDENINAAQNSNVVVAVPKFFLAESATIVVESEAGQGRSLHFLP
THYISVIPLSRMVPRSTQAAAWFDEHKKPGSTLHFISGPSNSGDIEMQLVVGLHGPLEINYVIVKDL

Sequences:

>Translated_227_residues
MTGTIENRSKFLETLFEKRGGVELPFEPYVPISDLPETHLAHLTTEELLDIAKEQASRVSANLIETSSFEMNEVIRQLIE
KSGGGQVMIPSTDEFEKLGVNVISDQLVKWKIGKENRDENINAAQNSNVVVAVPKFFLAESATIVVESEAGQGRSLHFLP
THYISVIPLSRMVPRSTQAAAWFDEHKKPGSTLHFISGPSNSGDIEMQLVVGLHGPLEINYVIVKDL
>Mature_226_residues
TGTIENRSKFLETLFEKRGGVELPFEPYVPISDLPETHLAHLTTEELLDIAKEQASRVSANLIETSSFEMNEVIRQLIEK
SGGGQVMIPSTDEFEKLGVNVISDQLVKWKIGKENRDENINAAQNSNVVVAVPKFFLAESATIVVESEAGQGRSLHFLPT
HYISVIPLSRMVPRSTQAAAWFDEHKKPGSTLHFISGPSNSGDIEMQLVVGLHGPLEINYVIVKDL

Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source [H]

COG id: COG1556

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lutC/ykgG family [H]

Homologues:

Organism=Escherichia coli, GI87081718, Length=237, Percent_Identity=31.2236286919831, Blast_Score=95, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003741
- InterPro:   IPR002698
- InterPro:   IPR022823 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 25109; Mature: 24978

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTIENRSKFLETLFEKRGGVELPFEPYVPISDLPETHLAHLTTEELLDIAKEQASRVS
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH
ANLIETSSFEMNEVIRQLIEKSGGGQVMIPSTDEFEKLGVNVISDQLVKWKIGKENRDEN
HHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHCCHHHHCCEEEEECCCCCCCCC
INAAQNSNVVVAVPKFFLAESATIVVESEAGQGRSLHFLPTHYISVIPLSRMVPRSTQAA
CCCCCCCCEEEEECHHHHCCCEEEEEECCCCCCCEEEECHHHHHHHHHHHHHCCCCCHHH
AWFDEHKKPGSTLHFISGPSNSGDIEMQLVVGLHGPLEINYVIVKDL
HHHHHCCCCCCEEEEEECCCCCCCEEEEEEEECCCCEEEEEEEEECC
>Mature Secondary Structure 
TGTIENRSKFLETLFEKRGGVELPFEPYVPISDLPETHLAHLTTEELLDIAKEQASRVS
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH
ANLIETSSFEMNEVIRQLIEKSGGGQVMIPSTDEFEKLGVNVISDQLVKWKIGKENRDEN
HHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHCCHHHHCCEEEEECCCCCCCCC
INAAQNSNVVVAVPKFFLAESATIVVESEAGQGRSLHFLPTHYISVIPLSRMVPRSTQAA
CCCCCCCCEEEEECHHHHCCCEEEEEECCCCCCCEEEECHHHHHHHHHHHHHCCCCCHHH
AWFDEHKKPGSTLHFISGPSNSGDIEMQLVVGLHGPLEINYVIVKDL
HHHHHCCCCCCEEEEEECCCCCCCEEEEEEEECCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA