| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is ptnAB
Identifier: 15673688
GI number: 15673688
Start: 1762221
End: 1763210
Strand: Direct
Name: ptnAB
Synonym: L1762179
Alternate gene names: 15673688
Gene position: 1762221-1763210 (Clockwise)
Preceding gene: 15673687
Following gene: 15673689
Centisome position: 74.49
GC content: 43.13
Gene sequence:
>990_bases TTGAGTATCGGAATTGTTATTGCGAGCCATGGTGAATTCGCCGCAGGCATCAAACAATCTGGTTCTATGATTTTCGGAGA GCAAGAAAAAGTACAAGTTGTTACTTTTATGCCTAGCGAAGGACCAACTGATTTGCATGCTAAAATCGAAGCTGCCATCG CAACATTTGATGCTGAAGATGAAGTACTTGTCCTTGCTGACTTATGGAGCGGTTCTCCATTTAATCAAGCAAGTGCAGTG ATGGGTGAAAATCCAGAGCGCAAGATTGCTATCATCACAGGCCTCAACCTGCCTATGCTTATCCAAGCCTACACAGAACG CATGATGGATGCGTCTGCCGGGGTGGATAAAGTCGTAGCAAATATTATGAAAGAAGCCAAAGGCGGTATTAAAGTACTAC CTGAAGAACTTCAACCTGCTGAAGAAACTGCTGTTGCAGCTGCTCCGGCTGCTGTTCAAGGTGCGATTCCTGAAGGAACA GTCATCGGTGATGGTAAAATTAAAATTAACCTCGCTCGTATTGACTCACGTTTGCTTCACGGACAAGTTGCAACTGCTTG GACTCCAGACTCAAGAGCAAACCGCATCATCGTTGTTTCTGACACCGTTTCTAAAGATGAACTTCGTAAGAAGCTCATTG AACAAGCGGCTCCAACTGGTGTAAAAGCTAACGTTATACCAATTAAGAAAATGATTGAAGTTGCTAAAGACCCACGTTTT GGTGACACTAAAGCCCTTCTTCTTTTCGAAACGCCACAAGACGCTCTTGCAACAATCGAAGGTGGCGTACCAATTGAAAC ATTGAACGTTGGTTCTATGGCTCACTCAACTGGTAAAACAATGCTCAACAAAGTTCTTTCTATGGACAAAGATGACGTTG CTACTTTTGAAAAATTGCGTGACCTCGGAGTTAAATTCGACGTACGTAAAGTTCCAGCTGACTCTAAATCTGACCTCTTT GGTTTGATTAACAAAGCTGACGTACAATAA
Upstream 100 bases:
>100_bases GTGTAATATTTTTATGAAAACATTTGCAAATATTGATTTGAAGTAGTATAATAACTAAGTAATAATTTTTATTATAATCT TATATAGGAGGTTACTCACA
Downstream 100 bases:
>100_bases TCAGAATATGCTCGTCTGATATTCTGATTACTAAAATTGAATATTAGGCAGCCAAATAATTAAGGAGATATAAAAAACAT GGAATACGGTGTTTTATCTG
Product: mannose-specific PTS system component IIAB
Products: NA
Alternate protein names: EIIAB-Man; Mannose-specific phosphotransferase enzyme IIA component; EIII-Man; PTS system mannose-specific EIIA component; Mannose-specific phosphotransferase enzyme IIB component; PTS system mannose-specific EIIB component [H]
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSIGIVIASHGEFAAGIKQSGSMIFGEQEKVQVVTFMPSEGPTDLHAKIEAAIATFDAEDEVLVLADLWSGSPFNQASAV MGENPERKIAIITGLNLPMLIQAYTERMMDASAGVDKVVANIMKEAKGGIKVLPEELQPAEETAVAAAPAAVQGAIPEGT VIGDGKIKINLARIDSRLLHGQVATAWTPDSRANRIIVVSDTVSKDELRKKLIEQAAPTGVKANVIPIKKMIEVAKDPRF GDTKALLLFETPQDALATIEGGVPIETLNVGSMAHSTGKTMLNKVLSMDKDDVATFEKLRDLGVKFDVRKVPADSKSDLF GLINKADVQ
Sequences:
>Translated_329_residues MSIGIVIASHGEFAAGIKQSGSMIFGEQEKVQVVTFMPSEGPTDLHAKIEAAIATFDAEDEVLVLADLWSGSPFNQASAV MGENPERKIAIITGLNLPMLIQAYTERMMDASAGVDKVVANIMKEAKGGIKVLPEELQPAEETAVAAAPAAVQGAIPEGT VIGDGKIKINLARIDSRLLHGQVATAWTPDSRANRIIVVSDTVSKDELRKKLIEQAAPTGVKANVIPIKKMIEVAKDPRF GDTKALLLFETPQDALATIEGGVPIETLNVGSMAHSTGKTMLNKVLSMDKDDVATFEKLRDLGVKFDVRKVPADSKSDLF GLINKADVQ >Mature_328_residues SIGIVIASHGEFAAGIKQSGSMIFGEQEKVQVVTFMPSEGPTDLHAKIEAAIATFDAEDEVLVLADLWSGSPFNQASAVM GENPERKIAIITGLNLPMLIQAYTERMMDASAGVDKVVANIMKEAKGGIKVLPEELQPAEETAVAAAPAAVQGAIPEGTV IGDGKIKINLARIDSRLLHGQVATAWTPDSRANRIIVVSDTVSKDELRKKLIEQAAPTGVKANVIPIKKMIEVAKDPRFG DTKALLLFETPQDALATIEGGVPIETLNVGSMAHSTGKTMLNKVLSMDKDDVATFEKLRDLGVKFDVRKVPADSKSDLFG LINKADVQ
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG2893
COG function: function code G; Phosphotransferase system, mannose/fructose-specific component IIA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-4 domain [H]
Homologues:
Organism=Escherichia coli, GI1788120, Length=328, Percent_Identity=40.5487804878049, Blast_Score=226, Evalue=1e-60, Organism=Escherichia coli, GI87082217, Length=157, Percent_Identity=36.9426751592357, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1789527, Length=154, Percent_Identity=34.4155844155844, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004701 - InterPro: IPR004720 [H]
Pfam domain/function: PF03610 EIIA-man; PF03830 PTSIIB_sorb [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 35065; Mature: 34934
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS51096 PTS_EIIA_TYPE_4 ; PS51101 PTS_EIIB_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIGIVIASHGEFAAGIKQSGSMIFGEQEKVQVVTFMPSEGPTDLHAKIEAAIATFDAED CCEEEEEECCCCHHHHHHCCCCEEECCCCEEEEEEEECCCCCCCHHHHEEEEEEEECCCC EVLVLADLWSGSPFNQASAVMGENPERKIAIITGLNLPMLIQAYTERMMDASAGVDKVVA CEEEEEEECCCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHH NIMKEAKGGIKVLPEELQPAEETAVAAAPAAVQGAIPEGTVIGDGKIKINLARIDSRLLH HHHHHHCCCEEECCHHCCCHHHHHHHHCCHHHHCCCCCCEEEECCEEEEEEEHHHHHHHC GQVATAWTPDSRANRIIVVSDTVSKDELRKKLIEQAAPTGVKANVIPIKKMIEVAKDPRF CCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCCC GDTKALLLFETPQDALATIEGGVPIETLNVGSMAHSTGKTMLNKVLSMDKDDVATFEKLR CCCEEEEEEECCCHHHHEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH DLGVKFDVRKVPADSKSDLFGLINKADVQ HCCCEEEEEECCCCCCCHHHHHHHHCCCC >Mature Secondary Structure SIGIVIASHGEFAAGIKQSGSMIFGEQEKVQVVTFMPSEGPTDLHAKIEAAIATFDAED CEEEEEECCCCHHHHHHCCCCEEECCCCEEEEEEEECCCCCCCHHHHEEEEEEEECCCC EVLVLADLWSGSPFNQASAVMGENPERKIAIITGLNLPMLIQAYTERMMDASAGVDKVVA CEEEEEEECCCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHH NIMKEAKGGIKVLPEELQPAEETAVAAAPAAVQGAIPEGTVIGDGKIKINLARIDSRLLH HHHHHHCCCEEECCHHCCCHHHHHHHHCCHHHHCCCCCCEEEECCEEEEEEEHHHHHHHC GQVATAWTPDSRANRIIVVSDTVSKDELRKKLIEQAAPTGVKANVIPIKKMIEVAKDPRF CCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCCC GDTKALLLFETPQDALATIEGGVPIETLNVGSMAHSTGKTMLNKVLSMDKDDVATFEKLR CCCEEEEEEECCCHHHHEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH DLGVKFDVRKVPADSKSDLFGLINKADVQ HCCCEEEEEECCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA