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The map label for this gene is yqfA

Identifier: 15673592

GI number: 15673592

Start: 1652819

End: 1654291

Strand: Reverse

Name: yqfA

Synonym: L52568

Alternate gene names: NA

Gene position: 1654291-1652819 (Counterclockwise)

Preceding gene: 15673593

Following gene: 15673591

Centisome position: 69.93

GC content: 34.76

Gene sequence:

>1473_bases
ATGACAAATATGAATAAATCAACTACAATTGAGCGCCAAAAAAGAATTGTTGAAATATTGACACTCTTACACGAAGGGGG
GATGTTTGAGGACGCCAAAAAAATTTTTAATGAAGAATTTGATGGTGTAGATGTTTCGGAAATAACTGGTGCTGAAAAGG
CATTGATCCAAGGGGGGCTCAATCCCTCTGAAATTCAAAAATTATGCAATGTTCATGCAGCTGTCTTTAAAGGGGCTATT
ACAGATATTCATAAATCATCTTTAGAAGAAAATACTCCAGGACATCCTATTCATACAATGAAACTTGAAAATCAAGTGAT
TACATCGCTATTAAATGATGAAATTCGGTGGGTTTTTTCAAAGATTGAAAAAGGAGATTGGTCTTATAAAGAACGTTTAC
TTGCAGCGGTTATTGATTTGTATAATATTGACAAACATTATGCTAGAAAAGAAACTTTAATTTTTTCTTTTATGGAAAAA
TATGGAATCACAGCGCCACCAAAAGTTATGTGGGGTGTAGATGATAGTGTTCGTGAGATGATTAAAGAAGTAATTGTTTA
TTTAAAAACAGATAAAACAGCTTTGAACCCATTACGTGAAATGCTAGAAAATTTACTGACGGAAATTGAAGAAATGATTT
TTAAAGAAGAAGCAATTATGATTCCAATGTGCTTGGATGTCTTTTCTTTAAAAGATTGGGAACAAATAGAGGAGGATTCT
AAAGAGATTGGCTATGCATTCATTGCGGAACCTTTAAAATGGAAAGCTTCTAAAGAGTCAATTGAAAAGGAAAAAGAGCA
TGAACCTCAAAGATTGGCGGCGATTGAATCTGCTAAAGCAATGACAGAGGCTATTGCTAAGGAATCTGGTTTAGAAGTAA
GCAAACCTAAAAGAGTTAAGCGGCAATATGATTGGGAAAAAGTTACAAGTGAGGGAGTGGTTGTTTTGCCAACTGGCATG
TTACACCTCAATGAGTTAACGGCTTTGTTTAATGTTTTACCGGTTGATCTAAGTTTTGTTGATAAAGAAGATATCGTTCG
CTTTTTCTCGGGAGGAGAACGAATTTTTCCACGAGCTAAATCTGTAATTGGTCGACGTGTTATTGATTGCCACCCGCCAA
AATCAATGGCGGTAGTAGAAAAAATCCTAGAAGATTTTAAATCTGGAACACGCGATCAAGCTGATTTTTGGATTGATTTA
CATCGTTTTAATAAGAAAATTTATATTCGATATTTTGCAATGCGTGATGAAGAAACAGGAGAATATCTGGGCTGTTTAGA
AGTTTCGCAGGATATTACATCCATTCAAAATTTGGTGGGAGAGAAACGATTAGATGGTCATGAAAAAACAACTTCTGAAT
ATGAAAATCAAGTGGCTAAATCAATAAAAAAGTCTACTGACGGAGCTGTCAGAGGGGAAATGCCTGATTTTGTTAAGAAG
ATGTTAGCTGAAAAAGAGACAAAAAATAGCTAG

Upstream 100 bases:

>100_bases
TTCCAATGGGAGCAAAAATGAAACATATCGATTGGGATAAAATTGTTATTGCTTTTGCTGAGGCTGGTTTTGAGTTTTCA
AATCAGAAGGTGGAAGAATA

Downstream 100 bases:

>100_bases
TGGGGTATGGAAAATAAAAAGTGCTCAAAAGCACTTTTTTTATAAAATTCTAGTTGTAGAATAAAATAATAAAAAGTAGA
AATTTAATCATTTTACTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Sensory Box Protein; Pas/Pac Sensor Protein; PAS Domain S-Box; PAS Domain S-Box Protein

Number of amino acids: Translated: 490; Mature: 489

Protein sequence:

>490_residues
MTNMNKSTTIERQKRIVEILTLLHEGGMFEDAKKIFNEEFDGVDVSEITGAEKALIQGGLNPSEIQKLCNVHAAVFKGAI
TDIHKSSLEENTPGHPIHTMKLENQVITSLLNDEIRWVFSKIEKGDWSYKERLLAAVIDLYNIDKHYARKETLIFSFMEK
YGITAPPKVMWGVDDSVREMIKEVIVYLKTDKTALNPLREMLENLLTEIEEMIFKEEAIMIPMCLDVFSLKDWEQIEEDS
KEIGYAFIAEPLKWKASKESIEKEKEHEPQRLAAIESAKAMTEAIAKESGLEVSKPKRVKRQYDWEKVTSEGVVVLPTGM
LHLNELTALFNVLPVDLSFVDKEDIVRFFSGGERIFPRAKSVIGRRVIDCHPPKSMAVVEKILEDFKSGTRDQADFWIDL
HRFNKKIYIRYFAMRDEETGEYLGCLEVSQDITSIQNLVGEKRLDGHEKTTSEYENQVAKSIKKSTDGAVRGEMPDFVKK
MLAEKETKNS

Sequences:

>Translated_490_residues
MTNMNKSTTIERQKRIVEILTLLHEGGMFEDAKKIFNEEFDGVDVSEITGAEKALIQGGLNPSEIQKLCNVHAAVFKGAI
TDIHKSSLEENTPGHPIHTMKLENQVITSLLNDEIRWVFSKIEKGDWSYKERLLAAVIDLYNIDKHYARKETLIFSFMEK
YGITAPPKVMWGVDDSVREMIKEVIVYLKTDKTALNPLREMLENLLTEIEEMIFKEEAIMIPMCLDVFSLKDWEQIEEDS
KEIGYAFIAEPLKWKASKESIEKEKEHEPQRLAAIESAKAMTEAIAKESGLEVSKPKRVKRQYDWEKVTSEGVVVLPTGM
LHLNELTALFNVLPVDLSFVDKEDIVRFFSGGERIFPRAKSVIGRRVIDCHPPKSMAVVEKILEDFKSGTRDQADFWIDL
HRFNKKIYIRYFAMRDEETGEYLGCLEVSQDITSIQNLVGEKRLDGHEKTTSEYENQVAKSIKKSTDGAVRGEMPDFVKK
MLAEKETKNS
>Mature_489_residues
TNMNKSTTIERQKRIVEILTLLHEGGMFEDAKKIFNEEFDGVDVSEITGAEKALIQGGLNPSEIQKLCNVHAAVFKGAIT
DIHKSSLEENTPGHPIHTMKLENQVITSLLNDEIRWVFSKIEKGDWSYKERLLAAVIDLYNIDKHYARKETLIFSFMEKY
GITAPPKVMWGVDDSVREMIKEVIVYLKTDKTALNPLREMLENLLTEIEEMIFKEEAIMIPMCLDVFSLKDWEQIEEDSK
EIGYAFIAEPLKWKASKESIEKEKEHEPQRLAAIESAKAMTEAIAKESGLEVSKPKRVKRQYDWEKVTSEGVVVLPTGML
HLNELTALFNVLPVDLSFVDKEDIVRFFSGGERIFPRAKSVIGRRVIDCHPPKSMAVVEKILEDFKSGTRDQADFWIDLH
RFNKKIYIRYFAMRDEETGEYLGCLEVSQDITSIQNLVGEKRLDGHEKTTSEYENQVAKSIKKSTDGAVRGEMPDFVKKM
LAEKETKNS

Specific function: Unknown

COG id: COG2461

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56138; Mature: 56007

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNMNKSTTIERQKRIVEILTLLHEGGMFEDAKKIFNEEFDGVDVSEITGAEKALIQGGL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHHCCC
NPSEIQKLCNVHAAVFKGAITDIHKSSLEENTPGHPIHTMKLENQVITSLLNDEIRWVFS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH
KIEKGDWSYKERLLAAVIDLYNIDKHYARKETLIFSFMEKYGITAPPKVMWGVDDSVREM
HHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHH
IKEVIVYLKTDKTALNPLREMLENLLTEIEEMIFKEEAIMIPMCLDVFSLKDWEQIEEDS
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KEIGYAFIAEPLKWKASKESIEKEKEHEPQRLAAIESAKAMTEAIAKESGLEVSKPKRVK
HHCCHHHHHCCHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
RQYDWEKVTSEGVVVLPTGMLHLNELTALFNVLPVDLSFVDKEDIVRFFSGGERIFPRAK
HHCCHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHCCCCHHHHHHH
SVIGRRVIDCHPPKSMAVVEKILEDFKSGTRDQADFWIDLHRFNKKIYIRYFAMRDEETG
HHHHCHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCC
EYLGCLEVSQDITSIQNLVGEKRLDGHEKTTSEYENQVAKSIKKSTDGAVRGEMPDFVKK
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
MLAEKETKNS
HHHHHHCCCC
>Mature Secondary Structure 
TNMNKSTTIERQKRIVEILTLLHEGGMFEDAKKIFNEEFDGVDVSEITGAEKALIQGGL
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHHCCC
NPSEIQKLCNVHAAVFKGAITDIHKSSLEENTPGHPIHTMKLENQVITSLLNDEIRWVFS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH
KIEKGDWSYKERLLAAVIDLYNIDKHYARKETLIFSFMEKYGITAPPKVMWGVDDSVREM
HHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHH
IKEVIVYLKTDKTALNPLREMLENLLTEIEEMIFKEEAIMIPMCLDVFSLKDWEQIEEDS
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KEIGYAFIAEPLKWKASKESIEKEKEHEPQRLAAIESAKAMTEAIAKESGLEVSKPKRVK
HHCCHHHHHCCHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
RQYDWEKVTSEGVVVLPTGMLHLNELTALFNVLPVDLSFVDKEDIVRFFSGGERIFPRAK
HHCCHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHCCCCHHHHHHH
SVIGRRVIDCHPPKSMAVVEKILEDFKSGTRDQADFWIDLHRFNKKIYIRYFAMRDEETG
HHHHCHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCC
EYLGCLEVSQDITSIQNLVGEKRLDGHEKTTSEYENQVAKSIKKSTDGAVRGEMPDFVKK
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
MLAEKETKNS
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA