| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is ynhH
Identifier: 15673322
GI number: 15673322
Start: 1378866
End: 1379273
Strand: Direct
Name: ynhH
Synonym: L178600
Alternate gene names: NA
Gene position: 1378866-1379273 (Clockwise)
Preceding gene: 15673321
Following gene: 15673323
Centisome position: 58.29
GC content: 33.58
Gene sequence:
>408_bases ATGAACTTCTTTAAAAACACGGTTAATTTTTTTAAAAGCATAAAGACAAAACCGCTTGATTTTGTTATTATTTTTCTACT GTTCATCGCTTCTTTCTCAACCTTGTTCTTCTTCGCTACTGGTTCCAAGGGAGCTCAGGCCGAACTAAGAATTAGTGGTA AGGTGATTAAAACTTTTAATTTAAATAAAAATCAAACTTGGACCTACCGTGATAAAGATGGCGATTATAATAAAATACAA GTTAAAAATGGTGAAATTGCGGTTGTCGAAGCCAATTGTAAAGACCAAATTGACGTCCAAAGGGGCTATATTTCTAAGAC TGGGGAAACTATCGTCTGTTTACCTCATAATTTAGTGATTGAAGTTATGAGTGGTCAAAAGGATGAACAGGTAGATTATA AAGTATGA
Upstream 100 bases:
>100_bases GATGACTCAAAAAATATCACTAAAAAATAAGAAAGAGCCGAAAGGCTTTTTCTTTTTGATTTCGTGAATTTTTTCATTAA TTCTGCTATAATTAACCTTA
Downstream 100 bases:
>100_bases ATATTAAAGAATACGTTTATGTTTCTCTATTGACAGCTGCTGCGGTAGTTATGGGAATTATTGAAAGCTCTTTACCTCCT TTTTTTGCTTTTGCACCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MNFFKNTVNFFKSIKTKPLDFVIIFLLFIASFSTLFFFATGSKGAQAELRISGKVIKTFNLNKNQTWTYRDKDGDYNKIQ VKNGEIAVVEANCKDQIDVQRGYISKTGETIVCLPHNLVIEVMSGQKDEQVDYKV
Sequences:
>Translated_135_residues MNFFKNTVNFFKSIKTKPLDFVIIFLLFIASFSTLFFFATGSKGAQAELRISGKVIKTFNLNKNQTWTYRDKDGDYNKIQ VKNGEIAVVEANCKDQIDVQRGYISKTGETIVCLPHNLVIEVMSGQKDEQVDYKV >Mature_135_residues MNFFKNTVNFFKSIKTKPLDFVIIFLLFIASFSTLFFFATGSKGAQAELRISGKVIKTFNLNKNQTWTYRDKDGDYNKIQ VKNGEIAVVEANCKDQIDVQRGYISKTGETIVCLPHNLVIEVMSGQKDEQVDYKV
Specific function: Unknown
COG id: COG5341
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15403; Mature: 15403
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFFKNTVNFFKSIKTKPLDFVIIFLLFIASFSTLFFFATGSKGAQAELRISGKVIKTFN CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCEEEEEEE LNKNQTWTYRDKDGDYNKIQVKNGEIAVVEANCKDQIDVQRGYISKTGETIVCLPHNLVI CCCCCEEEEECCCCCCCEEEEECCCEEEEECCCCCCCEECCCEECCCCCEEEEECCHHEE EVMSGQKDEQVDYKV EECCCCCCCCCCCCC >Mature Secondary Structure MNFFKNTVNFFKSIKTKPLDFVIIFLLFIASFSTLFFFATGSKGAQAELRISGKVIKTFN CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCEEEEEEE LNKNQTWTYRDKDGDYNKIQVKNGEIAVVEANCKDQIDVQRGYISKTGETIVCLPHNLVI CCCCCEEEEECCCCCCCEEEEECCCEEEEECCCCCCCEECCCEECCCCCEEEEECCHHEE EVMSGQKDEQVDYKV EECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA